EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000014228 (Gene tree)
Gene ID: -
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP-ribosylation factor-like 13b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 5512 bases
Position: chrgroupI:21184053-21189564
Accession: ZDB-GENE-021217-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000018784	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000018822	-	1650	-	ENSGACP00000018784	404 (aa)	-	G3PMF3

Gene Model

Click here to download ENSGACG00000014228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000014228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000014228	arl13b	51	47.573	ENSGACG00000017318	arl13a	50	47.573

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000014228	arl13b	100	79.854	ENSAPOG00000013256	arl13b	100	80.630	Acanthochromis_polyacanthus
ENSGACG00000014228	arl13b	99	80.392	ENSACIG00000017582	arl13b	95	93.450	Amphilophus_citrinellus
ENSGACG00000014228	arl13b	100	79.854	ENSAOCG00000002828	arl13b	100	80.630	Amphiprion_ocellaris
ENSGACG00000014228	arl13b	96	78.734	ENSAPEG00000014654	arl13b	99	80.670	Amphiprion_percula
ENSGACG00000014228	arl13b	95	81.586	ENSATEG00000017586	arl13b	97	81.586	Anabas_testudineus
ENSGACG00000014228	arl13b	94	60.482	ENSACAG00000000523	ARL13B	99	60.241	Anolis_carolinensis
ENSGACG00000014228	arl13b	99	78.025	ENSACLG00000024227	arl13b	98	87.013	Astatotilapia_calliptera
ENSGACG00000014228	arl13b	99	73.206	ENSAMXG00000042824	arl13b	99	74.352	Astyanax_mexicanus
ENSGACG00000014228	arl13b	95	57.216	ENSCAPG00000006764	ARL13B	94	56.298	Cavia_aperea
ENSGACG00000014228	arl13b	99	57.598	ENSCPOG00000002558	ARL13B	99	57.108	Cavia_porcellus
ENSGACG00000014228	arl13b	95	58.394	ENSCLAG00000006379	ARL13B	99	57.908	Chinchilla_lanigera
ENSGACG00000014228	arl13b	99	61.609	ENSCPBG00000005599	ARL13B	99	59.722	Chrysemys_picta_bellii
ENSGACG00000014228	arl13b	100	75.182	ENSCSEG00000005258	arl13b	100	76.284	Cynoglossus_semilaevis
ENSGACG00000014228	arl13b	99	77.696	ENSCVAG00000001545	arl13b	91	89.956	Cyprinodon_variegatus
ENSGACG00000014228	arl13b	99	74.877	ENSDARG00000012763	arl13b	88	89.956	Danio_rerio
ENSGACG00000014228	arl13b	66	50.746	ENSEBUG00000006528	arl13b	90	50.000	Eptatretus_burgeri
ENSGACG00000014228	arl13b	99	55.556	ENSEEUG00000010823	ARL13B	99	54.398	Erinaceus_europaeus
ENSGACG00000014228	arl13b	94	57.000	ENSFALG00000001654	ARL13B	99	58.250	Ficedula_albicollis
ENSGACG00000014228	arl13b	99	60.233	ENSFDAG00000006556	ARL13B	99	61.538	Fukomys_damarensis
ENSGACG00000014228	arl13b	94	75.521	ENSFHEG00000016049	arl13b	99	75.521	Fundulus_heteroclitus
ENSGACG00000014228	arl13b	95	67.098	ENSGMOG00000018628	arl13b	99	68.394	Gadus_morhua
ENSGACG00000014228	arl13b	99	75.931	ENSGAFG00000000025	arl13b	85	89.520	Gambusia_affinis
ENSGACG00000014228	arl13b	99	61.806	ENSGAGG00000019336	ARL13B	99	59.184	Gopherus_agassizii
ENSGACG00000014228	arl13b	99	80.685	ENSHBUG00000020619	arl13b	99	81.174	Haplochromis_burtoni
ENSGACG00000014228	arl13b	94	79.016	ENSHCOG00000006106	arl13b	99	79.016	Hippocampus_comes
ENSGACG00000014228	arl13b	100	79.951	ENSKMAG00000001122	arl13b	99	80.196	Kryptolebias_marmoratus
ENSGACG00000014228	arl13b	100	78.537	ENSLBEG00000014612	arl13b	100	79.075	Labrus_bergylta
ENSGACG00000014228	arl13b	99	67.742	ENSLOCG00000010465	arl13b	99	68.203	Lepisosteus_oculatus
ENSGACG00000014228	arl13b	100	83.415	ENSMAMG00000021452	arl13b	100	83.415	Mastacembelus_armatus
ENSGACG00000014228	arl13b	99	81.127	ENSMZEG00005017827	arl13b	99	81.127	Maylandia_zebra
ENSGACG00000014228	arl13b	100	79.218	ENSMMOG00000010253	arl13b	100	79.218	Mola_mola
ENSGACG00000014228	arl13b	100	71.182	ENSMALG00000014655	arl13b	100	73.153	Monopterus_albus
ENSGACG00000014228	arl13b	99	59.813	MGP_CAROLIEiJ_G0020856	Arl13b	99	60.280	Mus_caroli
ENSGACG00000014228	arl13b	99	59.674	ENSMUSG00000022911	Arl13b	99	59.907	Mus_musculus
ENSGACG00000014228	arl13b	99	60.839	MGP_PahariEiJ_G0016561	Arl13b	99	60.789	Mus_pahari
ENSGACG00000014228	arl13b	99	59.677	MGP_SPRETEiJ_G0021763	Arl13b	99	60.373	Mus_spretus
ENSGACG00000014228	arl13b	95	59.268	ENSMLUG00000017473	ARL13B	96	59.367	Myotis_lucifugus
ENSGACG00000014228	arl13b	99	76.790	ENSNBRG00000004078	arl13b	92	93.450	Neolamprologus_brichardi
ENSGACG00000014228	arl13b	99	57.809	ENSNLEG00000001772	ARL13B	99	58.275	Nomascus_leucogenys
ENSGACG00000014228	arl13b	76	64.113	ENSMEUG00000008036	-	61	64.113	Notamacropus_eugenii
ENSGACG00000014228	arl13b	99	59.674	ENSODEG00000011381	ARL13B	99	59.767	Octodon_degus
ENSGACG00000014228	arl13b	99	75.862	ENSONIG00000001864	arl13b	99	75.751	Oreochromis_niloticus
ENSGACG00000014228	arl13b	100	77.833	ENSORLG00000006350	arl13b	91	92.140	Oryzias_latipes
ENSGACG00000014228	arl13b	100	77.586	ENSORLG00020013754	arl13b	100	77.586	Oryzias_latipes_hni
ENSGACG00000014228	arl13b	100	77.586	ENSORLG00015012586	arl13b	100	77.586	Oryzias_latipes_hsok
ENSGACG00000014228	arl13b	54	90.323	ENSOMEG00000010187	arl13b	89	88.210	Oryzias_melastigma
ENSGACG00000014228	arl13b	94	59.951	ENSPSIG00000018115	ARL13B	99	59.314	Pelodiscus_sinensis
ENSGACG00000014228	arl13b	100	78.589	ENSPMGG00000004584	arl13b	100	78.589	Periophthalmus_magnuspinnatus
ENSGACG00000014228	arl13b	97	48.317	ENSPCIG00000026984	ARL13B	95	47.115	Phascolarctos_cinereus
ENSGACG00000014228	arl13b	99	76.355	ENSPFOG00000005379	arl13b	99	76.355	Poecilia_formosa
ENSGACG00000014228	arl13b	94	76.440	ENSPLAG00000008699	arl13b	99	76.440	Poecilia_latipinna
ENSGACG00000014228	arl13b	96	75.255	ENSPMEG00000015387	arl13b	99	75.835	Poecilia_mexicana
ENSGACG00000014228	arl13b	99	74.939	ENSPREG00000006291	arl13b	99	75.430	Poecilia_reticulata
ENSGACG00000014228	arl13b	95	76.943	ENSPNYG00000022879	arl13b	98	76.943	Pundamilia_nyererei
ENSGACG00000014228	arl13b	99	74.572	ENSPNAG00000003803	arl13b	99	76.214	Pygocentrus_nattereri
ENSGACG00000014228	arl13b	56	81.778	ENSSFOG00015005491	arl13b	88	81.778	Scleropages_formosus
ENSGACG00000014228	arl13b	53	71.296	ENSSFOG00015023057	arl13b	85	71.296	Scleropages_formosus
ENSGACG00000014228	arl13b	100	76.942	ENSSMAG00000015450	arl13b	100	75.971	Scophthalmus_maximus
ENSGACG00000014228	arl13b	94	85.455	ENSSDUG00000005560	arl13b	96	85.455	Seriola_dumerili
ENSGACG00000014228	arl13b	94	85.195	ENSSLDG00000013361	arl13b	99	85.195	Seriola_lalandi_dorsalis
ENSGACG00000014228	arl13b	99	59.346	ENSSARG00000003872	ARL13B	99	60.047	Sorex_araneus
ENSGACG00000014228	arl13b	57	79.130	ENSSPUG00000006649	ARL13B	93	79.039	Sphenodon_punctatus
ENSGACG00000014228	arl13b	97	80.000	ENSSPAG00000016442	arl13b	91	80.759	Stegastes_partitus
ENSGACG00000014228	arl13b	99	58.920	ENSTGUG00000013493	ARL13B	99	58.685	Taeniopygia_guttata
ENSGACG00000014228	arl13b	99	54.989	ENSTRUG00000013035	-	89	70.306	Takifugu_rubripes
ENSGACG00000014228	arl13b	52	70.335	ENSTRUG00000003641	arl13b	79	70.192	Takifugu_rubripes
ENSGACG00000014228	arl13b	99	56.643	ENSVVUG00000021511	ARL13B	99	57.576	Vulpes_vulpes
ENSGACG00000014228	arl13b	99	59.174	ENSXETG00000032383	ARL13B	100	73.741	Xenopus_tropicalis
ENSGACG00000014228	arl13b	66	35.036	ENSXETG00000026166	arl13a	69	33.333	Xenopus_tropicalis
ENSGACG00000014228	arl13b	99	74.074	ENSXCOG00000016955	arl13b	99	74.074	Xiphophorus_couchianus
ENSGACG00000014228	arl13b	99	76.368	ENSXMAG00000002089	arl13b	99	76.963	Xiphophorus_maculatus