EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000014276 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2480 bases
Position: chrgroupXI:14715053-14717532
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000018846	PseudoU_synth_2	PF00849.22	4.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000018884	-	1452	-	ENSGACP00000018846	309 (aa)	-	G3PML5

Gene Model

Click here to download ENSGACG00000014276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000014276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000014276	rpusd1	97	55.776	ENSG00000007376	RPUSD1	98	65.455	Homo_sapiens
ENSGACG00000014276	rpusd1	100	81.230	ENSAPOG00000022221	rpusd1	99	78.641	Acanthochromis_polyacanthus
ENSGACG00000014276	rpusd1	97	56.811	ENSAMEG00000007461	RPUSD1	82	64.257	Ailuropoda_melanoleuca
ENSGACG00000014276	rpusd1	100	81.613	ENSACIG00000015863	rpusd1	100	81.935	Amphilophus_citrinellus
ENSGACG00000014276	rpusd1	100	83.819	ENSAOCG00000021975	rpusd1	97	83.819	Amphiprion_ocellaris
ENSGACG00000014276	rpusd1	100	84.142	ENSAPEG00000001316	rpusd1	97	84.142	Amphiprion_percula
ENSGACG00000014276	rpusd1	100	84.142	ENSATEG00000002984	rpusd1	99	84.142	Anabas_testudineus
ENSGACG00000014276	rpusd1	77	58.506	ENSAPLG00000012316	RPUSD1	98	58.091	Anas_platyrhynchos
ENSGACG00000014276	rpusd1	98	63.366	ENSACAG00000008953	RPUSD1	98	62.914	Anolis_carolinensis
ENSGACG00000014276	rpusd1	97	56.766	ENSANAG00000024709	RPUSD1	80	64.542	Aotus_nancymaae
ENSGACG00000014276	rpusd1	100	83.601	ENSACLG00000013692	rpusd1	100	80.707	Astatotilapia_calliptera
ENSGACG00000014276	rpusd1	98	69.180	ENSAMXG00000019802	rpusd1	99	68.197	Astyanax_mexicanus
ENSGACG00000014276	rpusd1	97	58.746	ENSBTAG00000000179	RPUSD1	81	66.534	Bos_taurus
ENSGACG00000014276	rpusd1	97	56.436	ENSCJAG00000012253	RPUSD1	97	56.436	Callithrix_jacchus
ENSGACG00000014276	rpusd1	97	56.579	ENSCAFG00000019614	RPUSD1	96	55.921	Canis_familiaris
ENSGACG00000014276	rpusd1	97	56.579	ENSCAFG00020008891	RPUSD1	96	55.921	Canis_lupus_dingo
ENSGACG00000014276	rpusd1	97	59.736	ENSCHIG00000012872	RPUSD1	81	67.331	Capra_hircus
ENSGACG00000014276	rpusd1	97	55.776	ENSTSYG00000036934	RPUSD1	76	73.000	Carlito_syrichta
ENSGACG00000014276	rpusd1	97	55.776	ENSCAPG00000014219	RPUSD1	82	63.745	Cavia_aperea
ENSGACG00000014276	rpusd1	97	55.776	ENSCPOG00000034604	RPUSD1	82	63.745	Cavia_porcellus
ENSGACG00000014276	rpusd1	97	56.436	ENSCCAG00000034385	RPUSD1	80	64.143	Cebus_capucinus
ENSGACG00000014276	rpusd1	97	56.436	ENSCATG00000042983	RPUSD1	76	74.000	Cercocebus_atys
ENSGACG00000014276	rpusd1	81	64.143	ENSCLAG00000013966	RPUSD1	82	64.143	Chinchilla_lanigera
ENSGACG00000014276	rpusd1	97	56.106	ENSCSAG00000012121	RPUSD1	80	64.542	Chlorocebus_sabaeus
ENSGACG00000014276	rpusd1	98	61.842	ENSCPBG00000021101	RPUSD1	98	61.258	Chrysemys_picta_bellii
ENSGACG00000014276	rpusd1	81	64.542	ENSCANG00000028576	RPUSD1	89	64.542	Colobus_angolensis_palliatus
ENSGACG00000014276	rpusd1	98	56.908	ENSCGRG00001014253	Rpusd1	83	63.745	Cricetulus_griseus_chok1gshd
ENSGACG00000014276	rpusd1	98	56.908	ENSCGRG00000017995	Rpusd1	83	63.745	Cricetulus_griseus_crigri
ENSGACG00000014276	rpusd1	97	80.795	ENSCSEG00000018512	rpusd1	99	78.289	Cynoglossus_semilaevis
ENSGACG00000014276	rpusd1	100	78.641	ENSCVAG00000022746	rpusd1	100	78.641	Cyprinodon_variegatus
ENSGACG00000014276	rpusd1	98	71.192	ENSDARG00000060192	rpusd1	98	69.205	Danio_rerio
ENSGACG00000014276	rpusd1	97	57.096	ENSDNOG00000003721	RPUSD1	85	61.686	Dasypus_novemcinctus
ENSGACG00000014276	rpusd1	97	57.426	ENSDORG00000026656	Rpusd1	83	65.339	Dipodomys_ordii
ENSGACG00000014276	rpusd1	96	46.965	ENSEBUG00000008767	rpusd1	79	52.874	Eptatretus_burgeri
ENSGACG00000014276	rpusd1	97	57.329	ENSEASG00005018421	RPUSD1	60	65.339	Equus_asinus_asinus
ENSGACG00000014276	rpusd1	98	73.026	ENSELUG00000014307	rpusd1	88	73.026	Esox_lucius
ENSGACG00000014276	rpusd1	97	57.807	ENSFCAG00000010359	RPUSD1	73	75.258	Felis_catus
ENSGACG00000014276	rpusd1	98	64.901	ENSFALG00000003211	RPUSD1	98	63.036	Ficedula_albicollis
ENSGACG00000014276	rpusd1	97	56.106	ENSFDAG00000013398	RPUSD1	82	62.948	Fukomys_damarensis
ENSGACG00000014276	rpusd1	100	77.023	ENSFHEG00000004736	rpusd1	100	74.757	Fundulus_heteroclitus
ENSGACG00000014276	rpusd1	99	70.033	ENSGMOG00000010756	rpusd1	99	68.690	Gadus_morhua
ENSGACG00000014276	rpusd1	98	63.576	ENSGALG00000005315	RPUSD1	98	62.914	Gallus_gallus
ENSGACG00000014276	rpusd1	100	77.346	ENSGAFG00000009886	rpusd1	100	77.346	Gambusia_affinis
ENSGACG00000014276	rpusd1	98	60.855	ENSGAGG00000004181	RPUSD1	98	60.000	Gopherus_agassizii
ENSGACG00000014276	rpusd1	98	56.579	ENSGGOG00000013997	RPUSD1	86	67.257	Gorilla_gorilla
ENSGACG00000014276	rpusd1	100	83.923	ENSHBUG00000023728	rpusd1	100	81.029	Haplochromis_burtoni
ENSGACG00000014276	rpusd1	97	55.446	ENSHGLG00000002595	RPUSD1	82	62.948	Heterocephalus_glaber_female
ENSGACG00000014276	rpusd1	97	55.446	ENSHGLG00100014303	RPUSD1	82	62.948	Heterocephalus_glaber_male
ENSGACG00000014276	rpusd1	98	78.947	ENSHCOG00000002390	rpusd1	99	76.974	Hippocampus_comes
ENSGACG00000014276	rpusd1	97	66.445	ENSIPUG00000001570	rpusd1	98	66.445	Ictalurus_punctatus
ENSGACG00000014276	rpusd1	97	57.566	ENSSTOG00000004276	RPUSD1	82	64.542	Ictidomys_tridecemlineatus
ENSGACG00000014276	rpusd1	97	57.756	ENSJJAG00000015696	Rpusd1	83	64.542	Jaculus_jaculus
ENSGACG00000014276	rpusd1	99	78.571	ENSKMAG00000017287	rpusd1	99	78.571	Kryptolebias_marmoratus
ENSGACG00000014276	rpusd1	100	84.466	ENSLBEG00000013354	RPUSD1	99	84.466	Labrus_bergylta
ENSGACG00000014276	rpusd1	100	84.466	ENSLBEG00000022502	rpusd1	99	84.466	Labrus_bergylta
ENSGACG00000014276	rpusd1	98	60.927	ENSLACG00000008869	RPUSD1	98	60.596	Latimeria_chalumnae
ENSGACG00000014276	rpusd1	69	82.075	ENSLOCG00000005682	rpusd1	98	82.075	Lepisosteus_oculatus
ENSGACG00000014276	rpusd1	97	55.446	ENSLAFG00000002115	RPUSD1	83	62.948	Loxodonta_africana
ENSGACG00000014276	rpusd1	97	56.436	ENSMFAG00000003961	RPUSD1	76	74.000	Macaca_fascicularis
ENSGACG00000014276	rpusd1	97	56.436	ENSMMUG00000000842	RPUSD1	76	74.000	Macaca_mulatta
ENSGACG00000014276	rpusd1	97	56.436	ENSMNEG00000042712	RPUSD1	76	74.000	Macaca_nemestrina
ENSGACG00000014276	rpusd1	97	56.436	ENSMLEG00000030591	RPUSD1	76	74.000	Mandrillus_leucophaeus
ENSGACG00000014276	rpusd1	100	88.387	ENSMAMG00000004735	rpusd1	99	88.065	Mastacembelus_armatus
ENSGACG00000014276	rpusd1	100	83.601	ENSMZEG00005003214	rpusd1	100	80.707	Maylandia_zebra
ENSGACG00000014276	rpusd1	97	63.787	ENSMGAG00000005447	RPUSD1	99	63.000	Meleagris_gallopavo
ENSGACG00000014276	rpusd1	81	56.250	ENSMAUG00000019998	Rpusd1	96	56.250	Mesocricetus_auratus
ENSGACG00000014276	rpusd1	97	56.106	ENSMICG00000017561	RPUSD1	76	74.000	Microcebus_murinus
ENSGACG00000014276	rpusd1	97	56.766	ENSMOCG00000014082	Rpusd1	82	63.347	Microtus_ochrogaster
ENSGACG00000014276	rpusd1	99	77.451	ENSMMOG00000012569	rpusd1	99	77.451	Mola_mola
ENSGACG00000014276	rpusd1	98	61.258	ENSMODG00000016882	RPUSD1	97	60.927	Monodelphis_domestica
ENSGACG00000014276	rpusd1	100	85.806	ENSMALG00000017818	rpusd1	99	85.806	Monopterus_albus
ENSGACG00000014276	rpusd1	97	58.086	MGP_CAROLIEiJ_G0021244	Rpusd1	82	64.143	Mus_caroli
ENSGACG00000014276	rpusd1	97	57.756	ENSMUSG00000041199	Rpusd1	82	64.143	Mus_musculus
ENSGACG00000014276	rpusd1	97	57.096	MGP_PahariEiJ_G0023562	Rpusd1	81	63.745	Mus_pahari
ENSGACG00000014276	rpusd1	97	57.756	MGP_SPRETEiJ_G0022155	Rpusd1	82	64.143	Mus_spretus
ENSGACG00000014276	rpusd1	96	57.000	ENSMPUG00000015897	RPUSD1	82	64.113	Mustela_putorius_furo
ENSGACG00000014276	rpusd1	97	57.096	ENSMLUG00000001089	RPUSD1	82	63.922	Myotis_lucifugus
ENSGACG00000014276	rpusd1	97	56.766	ENSNGAG00000003595	Rpusd1	82	64.542	Nannospalax_galili
ENSGACG00000014276	rpusd1	100	80.707	ENSNBRG00000006457	rpusd1	100	77.814	Neolamprologus_brichardi
ENSGACG00000014276	rpusd1	54	48.521	ENSNLEG00000008424	-	97	48.521	Nomascus_leucogenys
ENSGACG00000014276	rpusd1	97	61.258	ENSMEUG00000016049	RPUSD1	97	61.667	Notamacropus_eugenii
ENSGACG00000014276	rpusd1	97	50.825	ENSOPRG00000008340	RPUSD1	84	56.574	Ochotona_princeps
ENSGACG00000014276	rpusd1	97	55.776	ENSODEG00000016945	RPUSD1	82	63.745	Octodon_degus
ENSGACG00000014276	rpusd1	99	84.091	ENSONIG00000015672	rpusd1	100	83.442	Oreochromis_niloticus
ENSGACG00000014276	rpusd1	100	75.728	ENSORLG00000013009	rpusd1	99	74.757	Oryzias_latipes
ENSGACG00000014276	rpusd1	100	75.728	ENSORLG00020010382	rpusd1	99	74.757	Oryzias_latipes_hni
ENSGACG00000014276	rpusd1	100	74.757	ENSORLG00015021354	rpusd1	99	73.786	Oryzias_latipes_hsok
ENSGACG00000014276	rpusd1	100	75.081	ENSOMEG00000021426	rpusd1	99	73.139	Oryzias_melastigma
ENSGACG00000014276	rpusd1	97	56.106	ENSOGAG00000003795	RPUSD1	80	63.745	Otolemur_garnettii
ENSGACG00000014276	rpusd1	97	59.076	ENSOARG00000014254	RPUSD1	81	66.932	Ovis_aries
ENSGACG00000014276	rpusd1	97	56.106	ENSPPAG00000034797	RPUSD1	86	67.257	Pan_paniscus
ENSGACG00000014276	rpusd1	97	58.472	ENSPPRG00000012389	RPUSD1	95	59.712	Panthera_pardus
ENSGACG00000014276	rpusd1	97	58.472	ENSPTIG00000008545	RPUSD1	95	59.712	Panthera_tigris_altaica
ENSGACG00000014276	rpusd1	97	56.106	ENSPTRG00000007565	RPUSD1	86	67.257	Pan_troglodytes
ENSGACG00000014276	rpusd1	97	56.436	ENSPANG00000024401	RPUSD1	76	74.000	Papio_anubis
ENSGACG00000014276	rpusd1	98	70.395	ENSPKIG00000018890	rpusd1	90	69.408	Paramormyrops_kingsleyae
ENSGACG00000014276	rpusd1	98	63.072	ENSPSIG00000013945	RPUSD1	98	62.500	Pelodiscus_sinensis
ENSGACG00000014276	rpusd1	100	73.463	ENSPMGG00000014950	rpusd1	99	71.521	Periophthalmus_magnuspinnatus
ENSGACG00000014276	rpusd1	97	57.426	ENSPEMG00000000497	Rpusd1	82	64.143	Peromyscus_maniculatus_bairdii
ENSGACG00000014276	rpusd1	98	54.426	ENSPMAG00000001563	rpusd1	84	61.176	Petromyzon_marinus
ENSGACG00000014276	rpusd1	97	62.295	ENSPCIG00000021216	-	93	61.765	Phascolarctos_cinereus
ENSGACG00000014276	rpusd1	100	77.670	ENSPFOG00000007946	rpusd1	100	73.633	Poecilia_formosa
ENSGACG00000014276	rpusd1	100	77.994	ENSPLAG00000011925	rpusd1	100	73.633	Poecilia_latipinna
ENSGACG00000014276	rpusd1	100	77.670	ENSPMEG00000002910	rpusd1	100	73.633	Poecilia_mexicana
ENSGACG00000014276	rpusd1	100	78.964	ENSPREG00000019851	rpusd1	100	78.964	Poecilia_reticulata
ENSGACG00000014276	rpusd1	97	44.371	ENSPCAG00000002258	RPUSD1	83	48.800	Procavia_capensis
ENSGACG00000014276	rpusd1	97	55.776	ENSPCOG00000022582	RPUSD1	76	74.000	Propithecus_coquereli
ENSGACG00000014276	rpusd1	97	53.135	ENSPVAG00000013104	RPUSD1	97	53.135	Pteropus_vampyrus
ENSGACG00000014276	rpusd1	100	83.923	ENSPNYG00000024076	rpusd1	100	81.029	Pundamilia_nyererei
ENSGACG00000014276	rpusd1	98	66.230	ENSPNAG00000013806	rpusd1	99	65.132	Pygocentrus_nattereri
ENSGACG00000014276	rpusd1	97	58.224	ENSRNOG00000023639	Rpusd1	82	64.143	Rattus_norvegicus
ENSGACG00000014276	rpusd1	97	56.766	ENSRBIG00000030238	RPUSD1	76	74.000	Rhinopithecus_bieti
ENSGACG00000014276	rpusd1	97	56.766	ENSRROG00000036663	RPUSD1	76	74.000	Rhinopithecus_roxellana
ENSGACG00000014276	rpusd1	97	58.086	ENSSBOG00000033063	RPUSD1	83	64.940	Saimiri_boliviensis_boliviensis
ENSGACG00000014276	rpusd1	97	61.056	ENSSHAG00000013500	RPUSD1	97	61.000	Sarcophilus_harrisii
ENSGACG00000014276	rpusd1	98	71.523	ENSSFOG00015014394	rpusd1	98	70.199	Scleropages_formosus
ENSGACG00000014276	rpusd1	100	85.761	ENSSMAG00000008045	rpusd1	93	85.761	Scophthalmus_maximus
ENSGACG00000014276	rpusd1	100	88.997	ENSSDUG00000001829	rpusd1	97	88.997	Seriola_dumerili
ENSGACG00000014276	rpusd1	100	88.997	ENSSLDG00000020853	rpusd1	97	88.997	Seriola_lalandi_dorsalis
ENSGACG00000014276	rpusd1	53	71.257	ENSSARG00000011187	-	100	71.257	Sorex_araneus
ENSGACG00000014276	rpusd1	62	58.549	ENSSPUG00000005119	-	98	57.653	Sphenodon_punctatus
ENSGACG00000014276	rpusd1	100	87.379	ENSSPAG00000012708	rpusd1	99	87.379	Stegastes_partitus
ENSGACG00000014276	rpusd1	97	57.756	ENSSSCG00000008000	RPUSD1	97	65.873	Sus_scrofa
ENSGACG00000014276	rpusd1	81	69.880	ENSTGUG00000015375	RPUSD1	98	69.880	Taeniopygia_guttata
ENSGACG00000014276	rpusd1	100	80.259	ENSTRUG00000003041	rpusd1	99	80.259	Takifugu_rubripes
ENSGACG00000014276	rpusd1	99	72.222	ENSTNIG00000002660	rpusd1	99	72.222	Tetraodon_nigroviridis
ENSGACG00000014276	rpusd1	97	57.756	ENSTTRG00000010167	RPUSD1	80	65.737	Tursiops_truncatus
ENSGACG00000014276	rpusd1	97	56.250	ENSUAMG00000012736	RPUSD1	82	63.855	Ursus_americanus
ENSGACG00000014276	rpusd1	97	56.250	ENSUMAG00000021174	RPUSD1	90	63.855	Ursus_maritimus
ENSGACG00000014276	rpusd1	97	56.908	ENSVVUG00000012357	RPUSD1	82	64.257	Vulpes_vulpes
ENSGACG00000014276	rpusd1	97	62.791	ENSXETG00000007184	rpusd1	97	61.238	Xenopus_tropicalis
ENSGACG00000014276	rpusd1	100	77.346	ENSXCOG00000017930	rpusd1	100	77.346	Xiphophorus_couchianus
ENSGACG00000014276	rpusd1	100	77.994	ENSXMAG00000024084	rpusd1	100	77.994	Xiphophorus_maculatus