EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000014488 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA2
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 22490 bases
Position: chrgroupXIII:19166232-19188721
Accession: 11098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000019132	ResIII	PF04851.15	1e-08	1	1
ENSGACP00000019132	BRK	PF07533.16	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000019170	SMARCA2-202	4692	-	ENSGACP00000019132	1564 (aa)	-	G3PNE9
ENSGACT00000019174	SMARCA2-201	2974	-	ENSGACP00000019136	795 (aa)	-	G3PNF3

Gene Model

Click here to download ENSGACG00000014488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000014488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000014488	SMARCA2	96	69.930	ENSGACG00000006691	smarca4a	99	70.123
ENSGACG00000014488	SMARCA2	99	66.068	ENSGACG00000016033	-	99	66.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000014488	SMARCA2	97	78.618	ENSG00000080503	SMARCA2	99	96.000	Homo_sapiens
ENSGACG00000014488	SMARCA2	99	89.002	ENSAPOG00000002641	SMARCA2	99	89.701	Acanthochromis_polyacanthus
ENSGACG00000014488	SMARCA2	89	74.966	ENSAMEG00000012325	SMARCA2	98	84.261	Ailuropoda_melanoleuca
ENSGACG00000014488	SMARCA2	99	86.389	ENSACIG00000015607	SMARCA2	99	86.802	Amphilophus_citrinellus
ENSGACG00000014488	SMARCA2	99	89.270	ENSAOCG00000009647	-	99	89.460	Amphiprion_ocellaris
ENSGACG00000014488	SMARCA2	99	89.129	ENSAPEG00000007646	SMARCA2	99	89.574	Amphiprion_percula
ENSGACG00000014488	SMARCA2	99	89.150	ENSATEG00000006916	SMARCA2	98	89.404	Anabas_testudineus
ENSGACG00000014488	SMARCA2	88	77.233	ENSAPLG00000013873	SMARCA2	93	77.330	Anas_platyrhynchos
ENSGACG00000014488	SMARCA2	97	78.599	ENSACAG00000002423	SMARCA2	99	78.790	Anolis_carolinensis
ENSGACG00000014488	SMARCA2	97	78.835	ENSANAG00000026498	SMARCA2	99	79.429	Aotus_nancymaae
ENSGACG00000014488	SMARCA2	99	87.651	ENSACLG00000004248	SMARCA2	99	88.415	Astatotilapia_calliptera
ENSGACG00000014488	SMARCA2	99	83.808	ENSAMXG00000012404	smarca2	99	83.575	Astyanax_mexicanus
ENSGACG00000014488	SMARCA2	97	79.053	ENSBTAG00000007494	SMARCA2	99	79.593	Bos_taurus
ENSGACG00000014488	SMARCA2	97	78.811	ENSCJAG00000010710	SMARCA2	99	79.216	Callithrix_jacchus
ENSGACG00000014488	SMARCA2	97	78.988	ENSCAFG00000002013	SMARCA2	99	79.694	Canis_familiaris
ENSGACG00000014488	SMARCA2	74	84.490	ENSCAFG00020026802	SMARCA2	94	84.662	Canis_lupus_dingo
ENSGACG00000014488	SMARCA2	97	79.053	ENSCHIG00000025863	SMARCA2	99	79.593	Capra_hircus
ENSGACG00000014488	SMARCA2	97	76.292	ENSTSYG00000003858	SMARCA2	99	78.755	Carlito_syrichta
ENSGACG00000014488	SMARCA2	97	77.038	ENSCAPG00000002890	SMARCA2	99	77.119	Cavia_aperea
ENSGACG00000014488	SMARCA2	97	78.862	ENSCPOG00000005475	SMARCA2	99	79.554	Cavia_porcellus
ENSGACG00000014488	SMARCA2	97	79.043	ENSCCAG00000030636	SMARCA2	99	79.619	Cebus_capucinus
ENSGACG00000014488	SMARCA2	97	78.095	ENSCATG00000031470	SMARCA2	99	79.288	Cercocebus_atys
ENSGACG00000014488	SMARCA2	97	78.544	ENSCLAG00000014484	SMARCA2	99	79.962	Chinchilla_lanigera
ENSGACG00000014488	SMARCA2	92	79.766	ENSCSAG00000008650	SMARCA2	99	80.187	Chlorocebus_sabaeus
ENSGACG00000014488	SMARCA2	84	79.156	ENSCHOG00000004316	SMARCA2	86	79.156	Choloepus_hoffmanni
ENSGACG00000014488	SMARCA2	97	79.191	ENSCPBG00000025463	SMARCA2	98	82.135	Chrysemys_picta_bellii
ENSGACG00000014488	SMARCA2	97	78.872	ENSCANG00000039597	SMARCA2	99	79.644	Colobus_angolensis_palliatus
ENSGACG00000014488	SMARCA2	99	83.702	ENSCSEG00000019311	SMARCA2	98	84.268	Cynoglossus_semilaevis
ENSGACG00000014488	SMARCA2	86	84.804	ENSCVAG00000016571	SMARCA2	98	85.122	Cyprinodon_variegatus
ENSGACG00000014488	SMARCA2	99	83.122	ENSDARG00000008904	smarca2	99	83.133	Danio_rerio
ENSGACG00000014488	SMARCA2	97	78.205	ENSDNOG00000006402	SMARCA2	99	79.694	Dasypus_novemcinctus
ENSGACG00000014488	SMARCA2	97	79.053	ENSDORG00000014832	Smarca2	99	79.618	Dipodomys_ordii
ENSGACG00000014488	SMARCA2	78	60.714	FBgn0000212	brm	83	55.884	Drosophila_melanogaster
ENSGACG00000014488	SMARCA2	87	61.040	ENSEBUG00000002449	-	95	62.934	Eptatretus_burgeri
ENSGACG00000014488	SMARCA2	96	68.742	ENSEBUG00000011442	-	97	68.598	Eptatretus_burgeri
ENSGACG00000014488	SMARCA2	97	78.923	ENSEASG00005010312	SMARCA2	99	79.490	Equus_asinus_asinus
ENSGACG00000014488	SMARCA2	62	85.294	ENSEEUG00000015540	-	69	75.676	Erinaceus_europaeus
ENSGACG00000014488	SMARCA2	96	82.731	ENSELUG00000010318	smarca2	99	81.538	Esox_lucius
ENSGACG00000014488	SMARCA2	97	78.784	ENSFCAG00000001568	SMARCA2	99	79.631	Felis_catus
ENSGACG00000014488	SMARCA2	97	78.669	ENSFALG00000010416	SMARCA2	98	80.835	Ficedula_albicollis
ENSGACG00000014488	SMARCA2	97	78.159	ENSFDAG00000010502	SMARCA2	99	77.792	Fukomys_damarensis
ENSGACG00000014488	SMARCA2	99	87.791	ENSFHEG00000021250	SMARCA2	99	88.232	Fundulus_heteroclitus
ENSGACG00000014488	SMARCA2	99	84.345	ENSGMOG00000014229	SMARCA2	99	83.578	Gadus_morhua
ENSGACG00000014488	SMARCA2	97	78.916	ENSGALG00000010164	SMARCA2	99	79.429	Gallus_gallus
ENSGACG00000014488	SMARCA2	96	80.185	ENSGAFG00000001164	SMARCA2	95	80.647	Gambusia_affinis
ENSGACG00000014488	SMARCA2	97	79.126	ENSGAGG00000024412	SMARCA2	99	79.365	Gopherus_agassizii
ENSGACG00000014488	SMARCA2	88	85.021	ENSGGOG00000000513	SMARCA2	98	72.849	Gorilla_gorilla
ENSGACG00000014488	SMARCA2	99	88.023	ENSHBUG00000006691	SMARCA2	99	88.783	Haplochromis_burtoni
ENSGACG00000014488	SMARCA2	82	83.333	ENSHGLG00000005215	SMARCA2	98	78.984	Heterocephalus_glaber_female
ENSGACG00000014488	SMARCA2	100	78.635	ENSHGLG00100010496	SMARCA2	99	79.427	Heterocephalus_glaber_male
ENSGACG00000014488	SMARCA2	82	86.398	ENSHCOG00000015348	-	95	86.304	Hippocampus_comes
ENSGACG00000014488	SMARCA2	99	82.186	ENSIPUG00000011060	smarca2	98	81.933	Ictalurus_punctatus
ENSGACG00000014488	SMARCA2	97	78.645	ENSSTOG00000006812	SMARCA2	99	79.117	Ictidomys_tridecemlineatus
ENSGACG00000014488	SMARCA2	97	78.719	ENSJJAG00000010867	Smarca2	99	79.479	Jaculus_jaculus
ENSGACG00000014488	SMARCA2	99	86.989	ENSKMAG00000015844	-	99	87.366	Kryptolebias_marmoratus
ENSGACG00000014488	SMARCA2	50	65.971	ENSLACG00000000270	SMARCA2	99	68.595	Latimeria_chalumnae
ENSGACG00000014488	SMARCA2	97	81.270	ENSLOCG00000011499	smarca2	99	81.387	Lepisosteus_oculatus
ENSGACG00000014488	SMARCA2	97	78.359	ENSLAFG00000014061	SMARCA2	99	78.828	Loxodonta_africana
ENSGACG00000014488	SMARCA2	97	76.953	ENSMFAG00000003814	SMARCA2	99	78.981	Macaca_fascicularis
ENSGACG00000014488	SMARCA2	97	78.821	ENSMMUG00000015279	SMARCA2	99	79.442	Macaca_mulatta
ENSGACG00000014488	SMARCA2	97	77.994	ENSMNEG00000041069	SMARCA2	99	79.024	Macaca_nemestrina
ENSGACG00000014488	SMARCA2	90	84.936	ENSMLEG00000027418	SMARCA2	99	78.160	Mandrillus_leucophaeus
ENSGACG00000014488	SMARCA2	99	88.505	ENSMAMG00000003056	SMARCA2	99	89.070	Mastacembelus_armatus
ENSGACG00000014488	SMARCA2	99	88.317	ENSMZEG00005020709	SMARCA2	99	89.079	Maylandia_zebra
ENSGACG00000014488	SMARCA2	75	66.887	ENSMGAG00000005160	-	99	60.717	Meleagris_gallopavo
ENSGACG00000014488	SMARCA2	97	79.053	ENSMICG00000005162	SMARCA2	99	80.000	Microcebus_murinus
ENSGACG00000014488	SMARCA2	97	78.876	ENSMOCG00000001611	Smarca2	99	79.644	Microtus_ochrogaster
ENSGACG00000014488	SMARCA2	99	84.337	ENSMMOG00000014196	SMARCA2	99	84.908	Mola_mola
ENSGACG00000014488	SMARCA2	97	79.016	ENSMODG00000003578	SMARCA2	99	79.733	Monodelphis_domestica
ENSGACG00000014488	SMARCA2	99	87.238	ENSMALG00000009611	SMARCA2	99	87.683	Monopterus_albus
ENSGACG00000014488	SMARCA2	82	83.888	MGP_CAROLIEiJ_G0022841	Smarca2	99	79.148	Mus_caroli
ENSGACG00000014488	SMARCA2	97	79.140	ENSMUSG00000024921	Smarca2	99	96.000	Mus_musculus
ENSGACG00000014488	SMARCA2	97	79.140	MGP_PahariEiJ_G0014334	Smarca2	99	79.164	Mus_pahari
ENSGACG00000014488	SMARCA2	82	84.490	MGP_SPRETEiJ_G0023759	Smarca2	97	85.774	Mus_spretus
ENSGACG00000014488	SMARCA2	80	83.164	ENSMPUG00000005171	SMARCA2	93	83.491	Mustela_putorius_furo
ENSGACG00000014488	SMARCA2	97	75.255	ENSMLUG00000002342	SMARCA2	99	75.721	Myotis_lucifugus
ENSGACG00000014488	SMARCA2	97	77.657	ENSNGAG00000000108	Smarca2	99	78.338	Nannospalax_galili
ENSGACG00000014488	SMARCA2	94	75.218	ENSNBRG00000017998	SMARCA2	94	83.582	Neolamprologus_brichardi
ENSGACG00000014488	SMARCA2	92	74.011	ENSMEUG00000009812	SMARCA2	99	72.229	Notamacropus_eugenii
ENSGACG00000014488	SMARCA2	83	78.927	ENSOPRG00000013474	SMARCA2	99	75.588	Ochotona_princeps
ENSGACG00000014488	SMARCA2	82	83.991	ENSODEG00000005452	SMARCA2	98	78.828	Octodon_degus
ENSGACG00000014488	SMARCA2	99	88.224	ENSONIG00000014163	SMARCA2	99	88.602	Oreochromis_niloticus
ENSGACG00000014488	SMARCA2	97	78.988	ENSOCUG00000006320	SMARCA2	99	79.339	Oryctolagus_cuniculus
ENSGACG00000014488	SMARCA2	99	87.056	ENSORLG00000020820	SMARCA2	99	87.627	Oryzias_latipes
ENSGACG00000014488	SMARCA2	99	87.111	ENSORLG00015006289	SMARCA2	99	87.556	Oryzias_latipes_hsok
ENSGACG00000014488	SMARCA2	99	87.070	ENSOMEG00000009736	-	99	87.516	Oryzias_melastigma
ENSGACG00000014488	SMARCA2	80	84.738	ENSOGAG00000017053	SMARCA2	99	78.531	Otolemur_garnettii
ENSGACG00000014488	SMARCA2	97	77.763	ENSOARG00000013265	SMARCA2	99	78.984	Ovis_aries
ENSGACG00000014488	SMARCA2	90	85.137	ENSPPAG00000038717	SMARCA2	97	84.609	Pan_paniscus
ENSGACG00000014488	SMARCA2	97	78.849	ENSPPRG00000001879	SMARCA2	99	79.694	Panthera_pardus
ENSGACG00000014488	SMARCA2	97	78.521	ENSPTRG00000051168	SMARCA2	99	79.230	Pan_troglodytes
ENSGACG00000014488	SMARCA2	97	73.419	ENSPANG00000025121	SMARCA2	99	74.765	Papio_anubis
ENSGACG00000014488	SMARCA2	100	82.911	ENSPKIG00000018469	-	99	82.844	Paramormyrops_kingsleyae
ENSGACG00000014488	SMARCA2	97	78.762	ENSPSIG00000006284	SMARCA2	99	79.138	Pelodiscus_sinensis
ENSGACG00000014488	SMARCA2	99	80.292	ENSPMGG00000013696	-	98	80.865	Periophthalmus_magnuspinnatus
ENSGACG00000014488	SMARCA2	97	77.821	ENSPEMG00000019821	Smarca2	99	78.780	Peromyscus_maniculatus_bairdii
ENSGACG00000014488	SMARCA2	96	69.501	ENSPMAG00000005337	-	97	69.105	Petromyzon_marinus
ENSGACG00000014488	SMARCA2	97	79.275	ENSPCIG00000015658	SMARCA2	99	79.924	Phascolarctos_cinereus
ENSGACG00000014488	SMARCA2	99	87.017	ENSPFOG00000001856	SMARCA2	99	87.397	Poecilia_formosa
ENSGACG00000014488	SMARCA2	99	86.136	ENSPLAG00000017829	SMARCA2	96	86.512	Poecilia_latipinna
ENSGACG00000014488	SMARCA2	99	86.190	ENSPMEG00000001815	-	99	86.566	Poecilia_mexicana
ENSGACG00000014488	SMARCA2	99	86.073	ENSPREG00000013800	SMARCA2	99	86.449	Poecilia_reticulata
ENSGACG00000014488	SMARCA2	97	78.562	ENSPPYG00000019258	SMARCA2	99	79.188	Pongo_abelii
ENSGACG00000014488	SMARCA2	76	72.183	ENSPCAG00000016969	SMARCA2	76	72.183	Procavia_capensis
ENSGACG00000014488	SMARCA2	97	77.287	ENSPCOG00000025709	SMARCA2	99	77.587	Propithecus_coquereli
ENSGACG00000014488	SMARCA2	91	80.347	ENSPVAG00000000901	SMARCA2	92	80.132	Pteropus_vampyrus
ENSGACG00000014488	SMARCA2	99	85.433	ENSPNYG00000004533	SMARCA2	99	85.814	Pundamilia_nyererei
ENSGACG00000014488	SMARCA2	99	84.377	ENSPNAG00000014635	smarca2	98	84.207	Pygocentrus_nattereri
ENSGACG00000014488	SMARCA2	97	78.041	ENSRNOG00000011931	Smarca2	99	77.646	Rattus_norvegicus
ENSGACG00000014488	SMARCA2	97	77.706	ENSRBIG00000038618	SMARCA2	93	85.271	Rhinopithecus_bieti
ENSGACG00000014488	SMARCA2	97	77.656	ENSRROG00000019271	SMARCA2	99	79.199	Rhinopithecus_roxellana
ENSGACG00000014488	SMARCA2	91	84.726	ENSSBOG00000034827	SMARCA2	99	78.109	Saimiri_boliviensis_boliviensis
ENSGACG00000014488	SMARCA2	97	79.261	ENSSHAG00000007884	SMARCA2	99	79.593	Sarcophilus_harrisii
ENSGACG00000014488	SMARCA2	92	81.617	ENSSFOG00015014870	SMARCA2	97	83.181	Scleropages_formosus
ENSGACG00000014488	SMARCA2	99	87.312	ENSSMAG00000013707	SMARCA2	99	88.442	Scophthalmus_maximus
ENSGACG00000014488	SMARCA2	99	87.515	ENSSDUG00000008852	-	99	87.948	Seriola_dumerili
ENSGACG00000014488	SMARCA2	99	85.053	ENSSLDG00000025449	SMARCA2	98	85.303	Seriola_lalandi_dorsalis
ENSGACG00000014488	SMARCA2	93	75.460	ENSSARG00000007888	SMARCA2	93	80.132	Sorex_araneus
ENSGACG00000014488	SMARCA2	95	76.184	ENSSPUG00000001629	SMARCA2	96	76.651	Sphenodon_punctatus
ENSGACG00000014488	SMARCA2	99	88.966	ENSSPAG00000020091	-	99	89.727	Stegastes_partitus
ENSGACG00000014488	SMARCA2	97	79.053	ENSSSCG00000005232	SMARCA2	99	79.682	Sus_scrofa
ENSGACG00000014488	SMARCA2	97	78.474	ENSTGUG00000005460	SMARCA2	99	78.901	Taeniopygia_guttata
ENSGACG00000014488	SMARCA2	99	86.859	ENSTRUG00000015619	SMARCA2	99	88.079	Takifugu_rubripes
ENSGACG00000014488	SMARCA2	62	95.238	ENSTBEG00000008767	SMARCA2	68	95.238	Tupaia_belangeri
ENSGACG00000014488	SMARCA2	94	78.576	ENSTTRG00000002033	SMARCA2	95	79.202	Tursiops_truncatus
ENSGACG00000014488	SMARCA2	88	77.697	ENSUAMG00000024701	SMARCA2	99	78.184	Ursus_americanus
ENSGACG00000014488	SMARCA2	85	77.732	ENSVPAG00000001204	SMARCA2	98	72.414	Vicugna_pacos
ENSGACG00000014488	SMARCA2	74	84.075	ENSVVUG00000004598	SMARCA2	96	84.247	Vulpes_vulpes
ENSGACG00000014488	SMARCA2	100	74.707	ENSXETG00000015299	smarca2	99	74.200	Xenopus_tropicalis
ENSGACG00000014488	SMARCA2	90	83.941	ENSXCOG00000011073	SMARCA2	99	84.723	Xiphophorus_couchianus
ENSGACG00000014488	SMARCA2	99	86.036	ENSXMAG00000015611	SMARCA2	99	86.537	Xiphophorus_maculatus