EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000014682 (Gene tree)
Gene ID: -
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 7449 bases
Position: chrgroupXIII:19684305-19691753
Accession: ZDB-GENE-050306-33
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000019387	Pept_tRNA_hydro	PF01195.19	1.2e-44	1	1
ENSGACP00000019390	Pept_tRNA_hydro	PF01195.19	6.5e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000019428	-	1128	-	ENSGACP00000019390	214 (aa)	-	G3PP57
ENSGACT00000019425	-	870	-	ENSGACP00000019387	192 (aa)	-	G3PP54

Gene Model

Click here to download ENSGACG00000014682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000014682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000014682	ptrh1	90	55.233	ENSG00000187024	PTRH1	91	50.000	Homo_sapiens
ENSGACG00000014682	ptrh1	93	83.500	ENSAPOG00000003014	-	71	83.500	Acanthochromis_polyacanthus
ENSGACG00000014682	ptrh1	93	83.500	ENSAPOG00000000947	PTRH1	71	83.500	Acanthochromis_polyacanthus
ENSGACG00000014682	ptrh1	93	83.500	ENSAPOG00000010719	ptrh1	71	83.500	Acanthochromis_polyacanthus
ENSGACG00000014682	ptrh1	89	54.971	ENSAMEG00000016791	PTRH1	82	54.598	Ailuropoda_melanoleuca
ENSGACG00000014682	ptrh1	86	83.030	ENSACIG00000006734	ptrh1	70	83.537	Amphilophus_citrinellus
ENSGACG00000014682	ptrh1	93	83.000	ENSAOCG00000009725	ptrh1	71	83.000	Amphiprion_ocellaris
ENSGACG00000014682	ptrh1	93	83.000	ENSAPEG00000020993	ptrh1	71	83.000	Amphiprion_percula
ENSGACG00000014682	ptrh1	97	82.258	ENSATEG00000010003	ptrh1	72	84.000	Anabas_testudineus
ENSGACG00000014682	ptrh1	89	58.235	ENSANAG00000025547	PTRH1	83	56.742	Aotus_nancymaae
ENSGACG00000014682	ptrh1	93	81.000	ENSACLG00000025462	ptrh1	79	77.500	Astatotilapia_calliptera
ENSGACG00000014682	ptrh1	89	74.118	ENSAMXG00000034117	ptrh1	79	64.286	Astyanax_mexicanus
ENSGACG00000014682	ptrh1	94	47.826	ENSBTAG00000012736	PTRH1	68	47.826	Bos_taurus
ENSGACG00000014682	ptrh1	89	56.471	ENSCJAG00000019841	PTRH1	69	54.762	Callithrix_jacchus
ENSGACG00000014682	ptrh1	89	56.140	ENSCAFG00000020123	PTRH1	81	55.429	Canis_familiaris
ENSGACG00000014682	ptrh1	89	56.471	ENSCAFG00020015776	PTRH1	78	55.747	Canis_lupus_dingo
ENSGACG00000014682	ptrh1	89	59.412	ENSCHIG00000008188	PTRH1	83	57.865	Capra_hircus
ENSGACG00000014682	ptrh1	64	55.738	ENSCAPG00000015926	PTRH1	79	61.818	Cavia_aperea
ENSGACG00000014682	ptrh1	96	55.435	ENSCPOG00000023968	PTRH1	89	54.737	Cavia_porcellus
ENSGACG00000014682	ptrh1	89	56.471	ENSCCAG00000023134	PTRH1	83	55.056	Cebus_capucinus
ENSGACG00000014682	ptrh1	89	55.882	ENSCATG00000042852	PTRH1	83	54.494	Cercocebus_atys
ENSGACG00000014682	ptrh1	96	56.757	ENSCLAG00000011155	PTRH1	82	58.286	Chinchilla_lanigera
ENSGACG00000014682	ptrh1	89	55.882	ENSCSAG00000013748	PTRH1	82	50.505	Chlorocebus_sabaeus
ENSGACG00000014682	ptrh1	81	56.774	ENSCPBG00000025207	PTRH1	90	54.777	Chrysemys_picta_bellii
ENSGACG00000014682	ptrh1	89	55.882	ENSCANG00000039856	PTRH1	87	53.158	Colobus_angolensis_palliatus
ENSGACG00000014682	ptrh1	96	56.989	ENSCGRG00001013108	Ptrh1	86	57.714	Cricetulus_griseus_chok1gshd
ENSGACG00000014682	ptrh1	93	57.542	ENSCGRG00000016553	Ptrh1	90	59.146	Cricetulus_griseus_crigri
ENSGACG00000014682	ptrh1	93	76.000	ENSCSEG00000010332	ptrh1	73	76.000	Cynoglossus_semilaevis
ENSGACG00000014682	ptrh1	57	82.727	ENSCVAG00000003873	-	80	83.486	Cyprinodon_variegatus
ENSGACG00000014682	ptrh1	93	83.582	ENSCVAG00000010701	ptrh1	74	83.582	Cyprinodon_variegatus
ENSGACG00000014682	ptrh1	100	61.682	ENSDARG00000098206	ptrh1	84	64.103	Danio_rerio
ENSGACG00000014682	ptrh1	95	59.239	ENSDNOG00000024194	PTRH1	83	58.427	Dasypus_novemcinctus
ENSGACG00000014682	ptrh1	95	57.065	ENSDORG00000013321	Ptrh1	79	57.988	Dipodomys_ordii
ENSGACG00000014682	ptrh1	90	57.558	ENSEASG00005020466	PTRH1	83	56.742	Equus_asinus_asinus
ENSGACG00000014682	ptrh1	93	56.425	ENSECAG00000007615	PTRH1	65	56.180	Equus_caballus
ENSGACG00000014682	ptrh1	91	78.736	ENSELUG00000015467	ptrh1	75	74.500	Esox_lucius
ENSGACG00000014682	ptrh1	81	61.935	ENSFCAG00000001483	PTRH1	83	57.627	Felis_catus
ENSGACG00000014682	ptrh1	85	54.878	ENSFALG00000001352	PTRH1	78	54.878	Ficedula_albicollis
ENSGACG00000014682	ptrh1	91	56.897	ENSFDAG00000020077	PTRH1	87	56.742	Fukomys_damarensis
ENSGACG00000014682	ptrh1	91	86.207	ENSFHEG00000010590	ptrh1	76	84.080	Fundulus_heteroclitus
ENSGACG00000014682	ptrh1	66	62.676	ENSGMOG00000009801	PTRH1	100	62.676	Gadus_morhua
ENSGACG00000014682	ptrh1	91	81.609	ENSGAFG00000016215	ptrh1	76	78.607	Gambusia_affinis
ENSGACG00000014682	ptrh1	92	59.887	ENSGAGG00000022860	PTRH1	83	56.989	Gopherus_agassizii
ENSGACG00000014682	ptrh1	90	55.233	ENSGGOG00000011033	PTRH1	83	54.494	Gorilla_gorilla
ENSGACG00000014682	ptrh1	93	80.000	ENSHBUG00000020824	ptrh1	72	80.000	Haplochromis_burtoni
ENSGACG00000014682	ptrh1	91	57.471	ENSHGLG00000019147	PTRH1	90	55.978	Heterocephalus_glaber_female
ENSGACG00000014682	ptrh1	91	53.448	ENSHGLG00100003681	PTRH1	90	53.371	Heterocephalus_glaber_male
ENSGACG00000014682	ptrh1	95	71.921	ENSHCOG00000014772	ptrh1	78	71.429	Hippocampus_comes
ENSGACG00000014682	ptrh1	97	70.430	ENSIPUG00000015364	ptrh1	80	67.647	Ictalurus_punctatus
ENSGACG00000014682	ptrh1	85	58.896	ENSSTOG00000008942	PTRH1	81	56.322	Ictidomys_tridecemlineatus
ENSGACG00000014682	ptrh1	95	57.065	ENSJJAG00000014338	Ptrh1	84	57.471	Jaculus_jaculus
ENSGACG00000014682	ptrh1	91	83.333	ENSKMAG00000003253	ptrh1	73	81.095	Kryptolebias_marmoratus
ENSGACG00000014682	ptrh1	66	85.714	ENSLBEG00000028842	ptrh1	75	85.714	Labrus_bergylta
ENSGACG00000014682	ptrh1	96	60.000	ENSLACG00000016741	PTRH1	71	61.628	Latimeria_chalumnae
ENSGACG00000014682	ptrh1	89	54.386	ENSLAFG00000021934	PTRH1	86	53.714	Loxodonta_africana
ENSGACG00000014682	ptrh1	89	55.882	ENSMFAG00000001700	PTRH1	83	54.494	Macaca_fascicularis
ENSGACG00000014682	ptrh1	89	55.882	ENSMMUG00000016424	PTRH1	83	54.494	Macaca_mulatta
ENSGACG00000014682	ptrh1	89	55.882	ENSMNEG00000033061	PTRH1	82	50.505	Macaca_nemestrina
ENSGACG00000014682	ptrh1	93	82.500	ENSMAMG00000017386	ptrh1	74	82.500	Mastacembelus_armatus
ENSGACG00000014682	ptrh1	90	80.925	ENSMZEG00005020001	ptrh1	79	77.000	Maylandia_zebra
ENSGACG00000014682	ptrh1	96	57.297	ENSMAUG00000006266	Ptrh1	86	57.714	Mesocricetus_auratus
ENSGACG00000014682	ptrh1	89	56.725	ENSMICG00000005611	PTRH1	84	56.044	Microcebus_murinus
ENSGACG00000014682	ptrh1	95	58.696	ENSMOCG00000013992	Ptrh1	86	58.857	Microtus_ochrogaster
ENSGACG00000014682	ptrh1	93	85.000	ENSMMOG00000014747	ptrh1	71	84.236	Mola_mola
ENSGACG00000014682	ptrh1	91	55.172	ENSMODG00000005503	PTRH1	82	54.494	Monodelphis_domestica
ENSGACG00000014682	ptrh1	69	73.485	ENSMALG00000005392	ptrh1	67	78.947	Monopterus_albus
ENSGACG00000014682	ptrh1	95	57.609	MGP_CAROLIEiJ_G0023450	Ptrh1	87	57.303	Mus_caroli
ENSGACG00000014682	ptrh1	95	57.609	ENSMUSG00000053746	Ptrh1	87	57.303	Mus_musculus
ENSGACG00000014682	ptrh1	95	57.609	MGP_PahariEiJ_G0024907	Ptrh1	87	57.303	Mus_pahari
ENSGACG00000014682	ptrh1	95	57.065	MGP_SPRETEiJ_G0024367	Ptrh1	87	56.742	Mus_spretus
ENSGACG00000014682	ptrh1	89	54.070	ENSMPUG00000013790	PTRH1	81	53.409	Mustela_putorius_furo
ENSGACG00000014682	ptrh1	89	52.747	ENSMLUG00000013454	PTRH1	84	52.432	Myotis_lucifugus
ENSGACG00000014682	ptrh1	97	54.787	ENSNGAG00000014008	Ptrh1	87	55.056	Nannospalax_galili
ENSGACG00000014682	ptrh1	93	80.500	ENSNBRG00000015590	ptrh1	72	80.500	Neolamprologus_brichardi
ENSGACG00000014682	ptrh1	89	55.294	ENSNLEG00000017468	PTRH1	83	53.933	Nomascus_leucogenys
ENSGACG00000014682	ptrh1	96	56.757	ENSODEG00000004012	PTRH1	83	58.286	Octodon_degus
ENSGACG00000014682	ptrh1	93	80.500	ENSONIG00000013912	ptrh1	77	80.500	Oreochromis_niloticus
ENSGACG00000014682	ptrh1	86	58.788	ENSOANG00000011891	PTRH1	85	53.927	Ornithorhynchus_anatinus
ENSGACG00000014682	ptrh1	89	56.725	ENSOCUG00000006894	PTRH1	77	55.618	Oryctolagus_cuniculus
ENSGACG00000014682	ptrh1	80	61.039	ENSOGAG00000008094	PTRH1	88	55.738	Otolemur_garnettii
ENSGACG00000014682	ptrh1	89	54.144	ENSOARG00000011808	PTRH1	84	52.910	Ovis_aries
ENSGACG00000014682	ptrh1	90	55.233	ENSPPAG00000041782	PTRH1	83	54.494	Pan_paniscus
ENSGACG00000014682	ptrh1	81	61.935	ENSPPRG00000007889	PTRH1	82	58.046	Panthera_pardus
ENSGACG00000014682	ptrh1	90	55.233	ENSPTRG00000021394	PTRH1	83	54.494	Pan_troglodytes
ENSGACG00000014682	ptrh1	93	42.786	ENSPANG00000031755	PTRH1	87	42.786	Papio_anubis
ENSGACG00000014682	ptrh1	91	70.690	ENSPKIG00000005449	ptrh1	65	66.162	Paramormyrops_kingsleyae
ENSGACG00000014682	ptrh1	92	56.497	ENSPSIG00000013828	PTRH1	69	52.020	Pelodiscus_sinensis
ENSGACG00000014682	ptrh1	92	66.497	ENSPMGG00000002148	ptrh1	70	67.179	Periophthalmus_magnuspinnatus
ENSGACG00000014682	ptrh1	84	62.346	ENSPEMG00000014360	Ptrh1	86	59.429	Peromyscus_maniculatus_bairdii
ENSGACG00000014682	ptrh1	91	83.333	ENSPFOG00000003715	ptrh1	76	80.597	Poecilia_formosa
ENSGACG00000014682	ptrh1	86	82.530	ENSPLAG00000023354	ptrh1	74	75.500	Poecilia_latipinna
ENSGACG00000014682	ptrh1	91	83.333	ENSPMEG00000000447	ptrh1	76	80.597	Poecilia_mexicana
ENSGACG00000014682	ptrh1	91	81.034	ENSPREG00000012612	ptrh1	76	78.607	Poecilia_reticulata
ENSGACG00000014682	ptrh1	89	52.941	ENSPPYG00000019628	PTRH1	77	51.685	Pongo_abelii
ENSGACG00000014682	ptrh1	90	57.558	ENSPCAG00000007016	PTRH1	80	58.480	Procavia_capensis
ENSGACG00000014682	ptrh1	90	56.395	ENSPCOG00000014541	PTRH1	85	55.738	Propithecus_coquereli
ENSGACG00000014682	ptrh1	89	58.480	ENSPVAG00000000954	PTRH1	83	57.303	Pteropus_vampyrus
ENSGACG00000014682	ptrh1	93	80.000	ENSPNYG00000007789	ptrh1	72	80.000	Pundamilia_nyererei
ENSGACG00000014682	ptrh1	97	73.262	ENSPNAG00000029930	ptrh1	77	68.293	Pygocentrus_nattereri
ENSGACG00000014682	ptrh1	95	58.696	ENSRNOG00000049034	Ptrh1	87	58.427	Rattus_norvegicus
ENSGACG00000014682	ptrh1	89	55.882	ENSRBIG00000027290	PTRH1	87	50.754	Rhinopithecus_bieti
ENSGACG00000014682	ptrh1	89	55.882	ENSRROG00000028799	PTRH1	82	50.754	Rhinopithecus_roxellana
ENSGACG00000014682	ptrh1	88	35.676	YHR189W	PTH1	93	34.637	Saccharomyces_cerevisiae
ENSGACG00000014682	ptrh1	89	55.882	ENSSBOG00000026699	PTRH1	78	54.494	Saimiri_boliviensis_boliviensis
ENSGACG00000014682	ptrh1	89	56.000	ENSSHAG00000018238	PTRH1	85	55.747	Sarcophilus_harrisii
ENSGACG00000014682	ptrh1	88	69.643	ENSSFOG00015007053	ptrh1	81	70.732	Scleropages_formosus
ENSGACG00000014682	ptrh1	86	84.337	ENSSMAG00000016747	ptrh1	70	83.030	Scophthalmus_maximus
ENSGACG00000014682	ptrh1	93	82.000	ENSSDUG00000013471	ptrh1	84	84.615	Seriola_dumerili
ENSGACG00000014682	ptrh1	85	83.030	ENSSLDG00000024662	ptrh1	73	83.030	Seriola_lalandi_dorsalis
ENSGACG00000014682	ptrh1	89	58.235	ENSSPUG00000000040	PTRH1	82	53.030	Sphenodon_punctatus
ENSGACG00000014682	ptrh1	93	81.500	ENSSPAG00000003298	ptrh1	83	83.133	Stegastes_partitus
ENSGACG00000014682	ptrh1	89	58.824	ENSSSCG00000005615	PTRH1	83	57.303	Sus_scrofa
ENSGACG00000014682	ptrh1	70	57.463	ENSTGUG00000003648	PTRH1	100	57.463	Taeniopygia_guttata
ENSGACG00000014682	ptrh1	93	82.000	ENSTRUG00000019801	PTRH1	74	78.000	Takifugu_rubripes
ENSGACG00000014682	ptrh1	91	81.034	ENSTNIG00000016735	ptrh1	84	75.661	Tetraodon_nigroviridis
ENSGACG00000014682	ptrh1	92	51.977	ENSTTRG00000016458	PTRH1	83	51.412	Tursiops_truncatus
ENSGACG00000014682	ptrh1	89	57.310	ENSUAMG00000023948	-	78	56.897	Ursus_americanus
ENSGACG00000014682	ptrh1	86	45.455	ENSVPAG00000001805	PTRH1	90	45.732	Vicugna_pacos
ENSGACG00000014682	ptrh1	89	56.471	ENSVVUG00000013198	PTRH1	78	55.747	Vulpes_vulpes
ENSGACG00000014682	ptrh1	88	60.714	ENSXETG00000009980	ptrh1	89	60.479	Xenopus_tropicalis
ENSGACG00000014682	ptrh1	88	79.882	ENSXCOG00000011498	ptrh1	72	80.357	Xiphophorus_couchianus
ENSGACG00000014682	ptrh1	91	81.609	ENSXMAG00000009256	ptrh1	76	78.607	Xiphophorus_maculatus