EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000014915 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: si:dkey-16l2.16
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3298 bases
Position: chrgroupXI:16290190-16293487
Accession: ZDB-GENE-141219-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000019689	MMR_HSR1	PF01926.23	4e-07	1	1
ENSGACP00000019690	MMR_HSR1	PF01926.23	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000019727	-	675	-	ENSGACP00000019689	225 (aa)	-	G3PQ04
ENSGACT00000019728	-	645	-	ENSGACP00000019690	214 (aa)	-	G3PQ05

Gene Model

Click here to download ENSGACG00000014915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000014915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000014915	si:dkey-16l2.16	74	31.013	ENSGACG00000012474	rabl2	74	30.120
ENSGACG00000014915	si:dkey-16l2.16	93	37.811	ENSGACG00000008659	rab5c	89	36.548
ENSGACG00000014915	si:dkey-16l2.16	57	30.147	ENSGACG00000011497	arfrp1	65	30.147
ENSGACG00000014915	si:dkey-16l2.16	96	38.462	ENSGACG00000013259	rab11al	74	45.912
ENSGACG00000014915	si:dkey-16l2.16	71	33.974	ENSGACG00000007818	si:ch73-116o1.2	81	32.515
ENSGACG00000014915	si:dkey-16l2.16	96	35.047	ENSGACG00000014678	rab36	79	33.810
ENSGACG00000014915	si:dkey-16l2.16	75	37.791	ENSGACG00000003726	rab6ba	75	37.888
ENSGACG00000014915	si:dkey-16l2.16	96	42.254	ENSGACG00000007722	rab15	99	44.382
ENSGACG00000014915	si:dkey-16l2.16	76	39.881	ENSGACG00000009647	RAB7A	81	39.881
ENSGACG00000014915	si:dkey-16l2.16	76	39.881	ENSGACG00000000807	-	82	39.881
ENSGACG00000014915	si:dkey-16l2.16	94	34.123	ENSGACG00000020514	rab34b	66	36.095
ENSGACG00000014915	si:dkey-16l2.16	86	32.000	ENSGACG00000003972	rab9a	96	32.000
ENSGACG00000014915	si:dkey-16l2.16	89	40.838	ENSGACG00000004997	rab5aa	89	40.102
ENSGACG00000014915	si:dkey-16l2.16	87	34.466	ENSGACG00000010473	RAB29	97	34.466
ENSGACG00000014915	si:dkey-16l2.16	80	46.328	ENSGACG00000018847	-	79	46.328
ENSGACG00000014915	si:dkey-16l2.16	81	35.519	ENSGACG00000013611	-	86	35.519
ENSGACG00000014915	si:dkey-16l2.16	93	30.085	ENSGACG00000003527	rab20	86	31.068
ENSGACG00000014915	si:dkey-16l2.16	93	52.133	ENSGACG00000000789	rab1ba	99	52.133
ENSGACG00000014915	si:dkey-16l2.16	79	34.503	ENSGACG00000011340	hrasb	90	34.483
ENSGACG00000014915	si:dkey-16l2.16	76	41.718	ENSGACG00000016799	-	96	40.964
ENSGACG00000014915	si:dkey-16l2.16	94	37.156	ENSGACG00000006162	-	96	37.156
ENSGACG00000014915	si:dkey-16l2.16	71	39.610	ENSGACG00000017153	rab41	73	39.610
ENSGACG00000014915	si:dkey-16l2.16	89	54.688	ENSGACG00000019642	-	92	55.615
ENSGACG00000014915	si:dkey-16l2.16	54	30.508	ENSGACG00000012810	arl4aa	59	30.508
ENSGACG00000014915	si:dkey-16l2.16	81	32.609	ENSGACG00000018711	rasl11a	73	31.868
ENSGACG00000014915	si:dkey-16l2.16	86	46.196	ENSGACG00000011925	rab13	93	44.681
ENSGACG00000014915	si:dkey-16l2.16	75	39.634	ENSGACG00000020356	rab6a	74	39.610
ENSGACG00000014915	si:dkey-16l2.16	80	42.781	ENSGACG00000019540	rab33ba	85	42.781
ENSGACG00000014915	si:dkey-16l2.16	79	30.726	ENSGACG00000004844	rras	91	30.636
ENSGACG00000014915	si:dkey-16l2.16	96	40.476	ENSGACG00000015479	rab11bb	73	46.541
ENSGACG00000014915	si:dkey-16l2.16	53	30.172	ENSGACG00000003070	arl3	60	31.356
ENSGACG00000014915	si:dkey-16l2.16	51	30.769	ENSGACG00000004052	arl8	64	30.000
ENSGACG00000014915	si:dkey-16l2.16	88	54.545	ENSGACG00000013401	zgc:171927	89	58.757
ENSGACG00000014915	si:dkey-16l2.16	97	33.333	ENSGACG00000018291	rab9b	88	35.556
ENSGACG00000014915	si:dkey-16l2.16	85	44.149	ENSGACG00000018745	rab33a	70	46.951
ENSGACG00000014915	si:dkey-16l2.16	96	40.476	ENSGACG00000013297	-	72	46.541
ENSGACG00000014915	si:dkey-16l2.16	73	47.826	ENSGACG00000001950	RAB39B	75	47.826
ENSGACG00000014915	si:dkey-16l2.16	71	30.968	ENSGACG00000019357	rasd4	74	30.968
ENSGACG00000014915	si:dkey-16l2.16	88	43.005	ENSGACG00000001725	zgc:101559	77	45.251
ENSGACG00000014915	si:dkey-16l2.16	86	37.949	ENSGACG00000005608	rab22a	97	37.949
ENSGACG00000014915	si:dkey-16l2.16	51	31.304	ENSGACG00000001204	arl5a	54	31.304
ENSGACG00000014915	si:dkey-16l2.16	97	68.599	ENSGACG00000013548	rab35b	86	77.457
ENSGACG00000014915	si:dkey-16l2.16	75	47.853	ENSGACG00000001694	rab18a	78	47.853
ENSGACG00000014915	si:dkey-16l2.16	74	47.170	ENSGACG00000014905	rab2a	77	46.667
ENSGACG00000014915	si:dkey-16l2.16	72	34.161	ENSGACG00000015457	dnajc27	74	32.919
ENSGACG00000014915	si:dkey-16l2.16	79	36.842	ENSGACG00000005397	si:ch211-247i17.1	92	37.037
ENSGACG00000014915	si:dkey-16l2.16	77	35.503	ENSGACG00000016680	rheb	95	34.444
ENSGACG00000014915	si:dkey-16l2.16	90	41.346	ENSGACG00000013249	rab25b	99	41.346
ENSGACG00000014915	si:dkey-16l2.16	80	34.659	ENSGACG00000019134	si:cabz01085950.1	73	36.054
ENSGACG00000014915	si:dkey-16l2.16	96	40.097	ENSGACG00000004965	rab25a	96	39.906
ENSGACG00000014915	si:dkey-16l2.16	55	31.405	ENSGACG00000003710	arl4d	61	31.405
ENSGACG00000014915	si:dkey-16l2.16	82	32.222	ENSGACG00000000729	rhebl1	91	34.104
ENSGACG00000014915	si:dkey-16l2.16	77	40.588	ENSGACG00000014578	RAB9A	85	40.588
ENSGACG00000014915	si:dkey-16l2.16	77	36.628	ENSGACG00000011607	rab32b	77	36.628
ENSGACG00000014915	si:dkey-16l2.16	79	30.000	ENSGACG00000015645	rras2	84	34.109
ENSGACG00000014915	si:dkey-16l2.16	78	38.596	ENSGACG00000013721	rab6bb	80	38.596
ENSGACG00000014915	si:dkey-16l2.16	77	36.970	ENSGACG00000019767	-	87	37.572
ENSGACG00000014915	si:dkey-16l2.16	80	40.000	ENSGACG00000016164	rab4a	84	40.000
ENSGACG00000014915	si:dkey-16l2.16	72	33.766	ENSGACG00000006151	rab23	74	33.143
ENSGACG00000014915	si:dkey-16l2.16	73	36.076	ENSGACG00000011661	kras	85	34.731
ENSGACG00000014915	si:dkey-16l2.16	79	37.640	ENSGACG00000011190	rab34a	64	38.462
ENSGACG00000014915	si:dkey-16l2.16	83	47.191	ENSGACG00000012006	rab30	96	44.271
ENSGACG00000014915	si:dkey-16l2.16	80	58.333	ENSGACG00000003864	rab1ab	88	58.659
ENSGACG00000014915	si:dkey-16l2.16	79	44.624	ENSGACG00000020437	-	91	44.624
ENSGACG00000014915	si:dkey-16l2.16	79	47.368	ENSGACG00000005979	RAB15	84	46.552
ENSGACG00000014915	si:dkey-16l2.16	93	42.786	ENSGACG00000016395	rab18b	79	48.466
ENSGACG00000014915	si:dkey-16l2.16	80	40.462	ENSGACG00000016639	rab12	88	38.743

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000014915	si:dkey-16l2.16	98	94.737	ENSAPOG00000008263	si:dkey-16l2.16	100	94.737	Acanthochromis_polyacanthus
ENSGACG00000014915	si:dkey-16l2.16	98	95.215	ENSAOCG00000016825	si:dkey-16l2.16	100	95.215	Amphiprion_ocellaris
ENSGACG00000014915	si:dkey-16l2.16	98	95.215	ENSAPEG00000006500	si:dkey-16l2.16	100	95.215	Amphiprion_percula
ENSGACG00000014915	si:dkey-16l2.16	98	93.780	ENSATEG00000019238	si:dkey-16l2.16	100	93.780	Anabas_testudineus
ENSGACG00000014915	si:dkey-16l2.16	98	94.737	ENSACLG00000018721	si:dkey-16l2.16	100	94.737	Astatotilapia_calliptera
ENSGACG00000014915	si:dkey-16l2.16	98	94.258	ENSAMXG00000038243	si:dkey-16l2.16	100	94.258	Astyanax_mexicanus
ENSGACG00000014915	si:dkey-16l2.16	55	96.610	ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	Cynoglossus_semilaevis
ENSGACG00000014915	si:dkey-16l2.16	98	92.344	ENSCVAG00000003537	si:dkey-16l2.16	100	92.344	Cyprinodon_variegatus
ENSGACG00000014915	si:dkey-16l2.16	98	92.344	ENSDARG00000037967	si:dkey-16l2.16	99	97.458	Danio_rerio
ENSGACG00000014915	si:dkey-16l2.16	97	86.473	ENSELUG00000023247	si:dkey-16l2.16	98	85.024	Esox_lucius
ENSGACG00000014915	si:dkey-16l2.16	57	93.388	ENSFHEG00000000767	si:dkey-16l2.16	78	93.388	Fundulus_heteroclitus
ENSGACG00000014915	si:dkey-16l2.16	75	83.951	ENSGMOG00000015174	si:dkey-16l2.16	99	84.568	Gadus_morhua
ENSGACG00000014915	si:dkey-16l2.16	98	86.124	ENSGAFG00000005388	si:dkey-16l2.16	100	86.124	Gambusia_affinis
ENSGACG00000014915	si:dkey-16l2.16	98	95.215	ENSHBUG00000019261	si:dkey-16l2.16	100	95.215	Haplochromis_burtoni
ENSGACG00000014915	si:dkey-16l2.16	98	93.780	ENSHCOG00000006538	si:dkey-16l2.16	100	93.780	Hippocampus_comes
ENSGACG00000014915	si:dkey-16l2.16	98	90.909	ENSKMAG00000003494	si:dkey-16l2.16	100	90.909	Kryptolebias_marmoratus
ENSGACG00000014915	si:dkey-16l2.16	98	96.172	ENSLBEG00000007681	si:dkey-16l2.16	100	96.172	Labrus_bergylta
ENSGACG00000014915	si:dkey-16l2.16	98	92.823	ENSMAMG00000019230	si:dkey-16l2.16	100	92.823	Mastacembelus_armatus
ENSGACG00000014915	si:dkey-16l2.16	98	94.737	ENSMZEG00005002081	si:dkey-16l2.16	100	94.737	Maylandia_zebra
ENSGACG00000014915	si:dkey-16l2.16	96	94.660	ENSMMOG00000020140	si:dkey-16l2.16	97	94.660	Mola_mola
ENSGACG00000014915	si:dkey-16l2.16	98	92.381	ENSMALG00000014727	si:dkey-16l2.16	99	92.381	Monopterus_albus
ENSGACG00000014915	si:dkey-16l2.16	98	94.258	ENSNBRG00000008930	si:dkey-16l2.16	100	94.258	Neolamprologus_brichardi
ENSGACG00000014915	si:dkey-16l2.16	98	95.694	ENSONIG00000009443	si:dkey-16l2.16	100	95.694	Oreochromis_niloticus
ENSGACG00000014915	si:dkey-16l2.16	98	89.048	ENSORLG00000001098	si:dkey-16l2.16	99	89.048	Oryzias_latipes
ENSGACG00000014915	si:dkey-16l2.16	98	89.048	ENSORLG00020000867	si:dkey-16l2.16	99	89.048	Oryzias_latipes_hni
ENSGACG00000014915	si:dkey-16l2.16	98	86.603	ENSOMEG00000015474	si:dkey-16l2.16	100	86.603	Oryzias_melastigma
ENSGACG00000014915	si:dkey-16l2.16	98	79.426	ENSPKIG00000018888	si:dkey-16l2.16	94	82.653	Paramormyrops_kingsleyae
ENSGACG00000014915	si:dkey-16l2.16	98	91.388	ENSPKIG00000005686	-	100	91.388	Paramormyrops_kingsleyae
ENSGACG00000014915	si:dkey-16l2.16	98	92.823	ENSPMGG00000000751	si:dkey-16l2.16	100	92.823	Periophthalmus_magnuspinnatus
ENSGACG00000014915	si:dkey-16l2.16	98	87.081	ENSPFOG00000004746	si:dkey-16l2.16	100	87.081	Poecilia_formosa
ENSGACG00000014915	si:dkey-16l2.16	98	86.603	ENSPLAG00000021043	si:dkey-16l2.16	100	86.603	Poecilia_latipinna
ENSGACG00000014915	si:dkey-16l2.16	98	87.081	ENSPMEG00000007165	si:dkey-16l2.16	100	87.081	Poecilia_mexicana
ENSGACG00000014915	si:dkey-16l2.16	98	86.603	ENSPREG00000005323	si:dkey-16l2.16	100	86.603	Poecilia_reticulata
ENSGACG00000014915	si:dkey-16l2.16	98	95.215	ENSPNYG00000009490	si:dkey-16l2.16	100	95.215	Pundamilia_nyererei
ENSGACG00000014915	si:dkey-16l2.16	98	94.737	ENSPNAG00000018986	si:dkey-16l2.16	100	94.737	Pygocentrus_nattereri
ENSGACG00000014915	si:dkey-16l2.16	97	78.846	ENSSFOG00015006414	-	85	83.051	Scleropages_formosus
ENSGACG00000014915	si:dkey-16l2.16	98	92.344	ENSSFOG00015021448	-	100	92.344	Scleropages_formosus
ENSGACG00000014915	si:dkey-16l2.16	98	90.000	ENSSMAG00000011769	si:dkey-16l2.16	94	90.000	Scophthalmus_maximus
ENSGACG00000014915	si:dkey-16l2.16	98	94.737	ENSSDUG00000005719	si:dkey-16l2.16	100	94.737	Seriola_dumerili
ENSGACG00000014915	si:dkey-16l2.16	98	94.737	ENSSLDG00000003631	si:dkey-16l2.16	100	94.737	Seriola_lalandi_dorsalis
ENSGACG00000014915	si:dkey-16l2.16	98	95.215	ENSSPAG00000006302	si:dkey-16l2.16	100	95.215	Stegastes_partitus
ENSGACG00000014915	si:dkey-16l2.16	98	93.301	ENSTRUG00000025076	si:dkey-16l2.16	100	93.301	Takifugu_rubripes
ENSGACG00000014915	si:dkey-16l2.16	98	92.344	ENSTNIG00000011300	si:dkey-16l2.16	100	92.344	Tetraodon_nigroviridis
ENSGACG00000014915	si:dkey-16l2.16	98	86.603	ENSXMAG00000021767	si:dkey-16l2.16	100	86.603	Xiphophorus_maculatus