EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000014944 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1 associated protein 1b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 5303 bases
Position: chrgroupIII:6298634-6303936
Accession: ZDB-GENE-040426-2386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000019717	RRM_1	PF00076.22	1e-28	1	2
ENSGACP00000019717	RRM_1	PF00076.22	1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000019755	-	1760	-	ENSGACP00000019717	331 (aa)	-	G3PQ32

Gene Model

Click here to download ENSGACG00000014944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000014944's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000014944	trnau1apb	96	46.106	ENSGACG00000001443	trnau1apa	94	43.925
ENSGACG00000014944	trnau1apb	51	31.098	ENSGACG00000013294	-	78	31.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000014944	trnau1apb	100	73.235	ENSAPOG00000010086	trnau1apb	100	73.235	Acanthochromis_polyacanthus
ENSGACG00000014944	trnau1apb	100	80.363	ENSACIG00000001863	trnau1apb	100	79.819	Amphilophus_citrinellus
ENSGACG00000014944	trnau1apb	100	82.991	ENSAOCG00000011891	trnau1apb	100	81.765	Amphiprion_ocellaris
ENSGACG00000014944	trnau1apb	100	82.440	ENSAPEG00000008029	trnau1apb	100	82.738	Amphiprion_percula
ENSGACG00000014944	trnau1apb	100	83.529	ENSATEG00000002196	trnau1apb	100	82.647	Anabas_testudineus
ENSGACG00000014944	trnau1apb	100	80.539	ENSACLG00000003016	trnau1apb	100	80.000	Astatotilapia_calliptera
ENSGACG00000014944	trnau1apb	99	68.373	ENSAMXG00000001805	trnau1apb	99	69.301	Astyanax_mexicanus
ENSGACG00000014944	trnau1apb	99	78.171	ENSCSEG00000018215	trnau1apb	99	78.761	Cynoglossus_semilaevis
ENSGACG00000014944	trnau1apb	95	73.636	ENSCVAG00000017866	trnau1apb	100	73.636	Cyprinodon_variegatus
ENSGACG00000014944	trnau1apb	100	64.072	ENSDARG00000056475	trnau1apb	98	66.565	Danio_rerio
ENSGACG00000014944	trnau1apb	100	63.964	ENSELUG00000016683	trnau1apb	99	64.970	Esox_lucius
ENSGACG00000014944	trnau1apb	100	78.386	ENSFHEG00000001267	trnau1apb	100	75.455	Fundulus_heteroclitus
ENSGACG00000014944	trnau1apb	100	72.126	ENSGMOG00000001160	trnau1apb	100	73.669	Gadus_morhua
ENSGACG00000014944	trnau1apb	53	94.350	ENSGAFG00000006770	trnau1apb	100	68.060	Gambusia_affinis
ENSGACG00000014944	trnau1apb	70	41.949	ENSGAGG00000022384	-	78	40.254	Gopherus_agassizii
ENSGACG00000014944	trnau1apb	100	82.647	ENSHBUG00000018944	trnau1apb	99	81.765	Haplochromis_burtoni
ENSGACG00000014944	trnau1apb	70	83.117	ENSHCOG00000011350	trnau1apb	73	83.117	Hippocampus_comes
ENSGACG00000014944	trnau1apb	99	63.798	ENSIPUG00000008843	tsp1l	99	66.261	Ictalurus_punctatus
ENSGACG00000014944	trnau1apb	66	88.584	ENSKMAG00000010082	trnau1apb	99	77.259	Kryptolebias_marmoratus
ENSGACG00000014944	trnau1apb	100	83.582	ENSLBEG00000020480	trnau1apb	100	83.582	Labrus_bergylta
ENSGACG00000014944	trnau1apb	100	53.529	ENSLOCG00000013175	trnau1apb	99	53.293	Lepisosteus_oculatus
ENSGACG00000014944	trnau1apb	100	82.301	ENSMAMG00000012192	trnau1apb	100	82.891	Mastacembelus_armatus
ENSGACG00000014944	trnau1apb	100	82.647	ENSMZEG00005014852	trnau1apb	99	81.765	Maylandia_zebra
ENSGACG00000014944	trnau1apb	70	39.831	ENSMGAG00000003234	-	98	40.928	Meleagris_gallopavo
ENSGACG00000014944	trnau1apb	97	74.709	ENSMMOG00000021521	trnau1apb	100	71.221	Mola_mola
ENSGACG00000014944	trnau1apb	100	71.299	ENSMALG00000003772	trnau1apb	100	71.299	Monopterus_albus
ENSGACG00000014944	trnau1apb	97	79.938	ENSNBRG00000000751	trnau1apb	99	79.385	Neolamprologus_brichardi
ENSGACG00000014944	trnau1apb	99	78.963	ENSONIG00000016639	trnau1apb	100	77.576	Oreochromis_niloticus
ENSGACG00000014944	trnau1apb	68	88.839	ENSORLG00000013265	trnau1apb	99	76.453	Oryzias_latipes
ENSGACG00000014944	trnau1apb	100	76.901	ENSORLG00020004464	trnau1apb	99	76.608	Oryzias_latipes_hni
ENSGACG00000014944	trnau1apb	100	76.901	ENSORLG00015021098	trnau1apb	99	76.608	Oryzias_latipes_hsok
ENSGACG00000014944	trnau1apb	68	88.393	ENSOMEG00000016531	trnau1apb	99	77.035	Oryzias_melastigma
ENSGACG00000014944	trnau1apb	100	60.360	ENSPKIG00000007995	trnau1apb	99	63.235	Paramormyrops_kingsleyae
ENSGACG00000014944	trnau1apb	70	43.220	ENSPSIG00000004189	-	78	40.084	Pelodiscus_sinensis
ENSGACG00000014944	trnau1apb	81	78.333	ENSPMGG00000018509	trnau1apb	99	64.638	Periophthalmus_magnuspinnatus
ENSGACG00000014944	trnau1apb	100	76.577	ENSPFOG00000003938	trnau1apb	100	75.529	Poecilia_formosa
ENSGACG00000014944	trnau1apb	100	75.434	ENSPLAG00000015480	trnau1apb	99	74.566	Poecilia_latipinna
ENSGACG00000014944	trnau1apb	100	75.434	ENSPMEG00000012743	trnau1apb	99	74.566	Poecilia_mexicana
ENSGACG00000014944	trnau1apb	100	74.277	ENSPREG00000015035	trnau1apb	99	73.699	Poecilia_reticulata
ENSGACG00000014944	trnau1apb	100	77.844	ENSPNYG00000012127	trnau1apb	100	77.313	Pundamilia_nyererei
ENSGACG00000014944	trnau1apb	99	64.970	ENSPNAG00000019138	trnau1apb	98	67.173	Pygocentrus_nattereri
ENSGACG00000014944	trnau1apb	99	63.063	ENSSFOG00015014158	trnau1apb	99	65.282	Scleropages_formosus
ENSGACG00000014944	trnau1apb	99	80.415	ENSSMAG00000001745	trnau1apb	99	80.415	Scophthalmus_maximus
ENSGACG00000014944	trnau1apb	99	83.186	ENSSDUG00000011109	trnau1apb	99	82.301	Seriola_dumerili
ENSGACG00000014944	trnau1apb	99	83.186	ENSSLDG00000012947	trnau1apb	99	82.301	Seriola_lalandi_dorsalis
ENSGACG00000014944	trnau1apb	70	36.923	ENSSPUG00000016701	-	82	36.015	Sphenodon_punctatus
ENSGACG00000014944	trnau1apb	100	82.941	ENSSPAG00000006917	trnau1apb	100	82.353	Stegastes_partitus
ENSGACG00000014944	trnau1apb	100	75.660	ENSTRUG00000008608	trnau1apb	99	74.780	Takifugu_rubripes
ENSGACG00000014944	trnau1apb	99	70.122	ENSTNIG00000000916	trnau1apb	100	68.902	Tetraodon_nigroviridis
ENSGACG00000014944	trnau1apb	94	69.231	ENSXCOG00000007974	trnau1apb	94	66.564	Xiphophorus_couchianus
ENSGACG00000014944	trnau1apb	100	75.434	ENSXMAG00000029918	trnau1apb	99	74.855	Xiphophorus_maculatus