EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000014955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 7367 bases
Position: chrscaffold_74:250410-257776
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000019731	KH_1	PF00013.29	1.8e-54	1	3
ENSGACP00000019731	KH_1	PF00013.29	1.8e-54	2	3
ENSGACP00000019731	KH_1	PF00013.29	1.8e-54	3	3
ENSGACP00000019731	KH_2	PF07650.17	5.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000019769	-	1089	-	ENSGACP00000019731	363 (aa)	-	G3PQ46

Gene Model

Click here to download ENSGACG00000014955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000014955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000014955	-	95	65.130	ENSGACG00000003044	zgc:110045	95	65.130
ENSGACG00000014955	-	95	65.988	ENSGACG00000003197	pcbp2	95	65.988
ENSGACG00000014955	-	95	66.570	ENSGACG00000006681	PCBP2	98	64.266
ENSGACG00000014955	-	58	37.879	ENSGACG00000012422	KHSRP	55	37.879
ENSGACG00000014955	-	97	81.690	ENSGACG00000002266	-	96	81.690
ENSGACG00000014955	-	95	57.670	ENSGACG00000002664	-	73	57.670
ENSGACG00000014955	-	58	36.923	ENSGACG00000016704	fubp3	54	36.923
ENSGACG00000014955	-	66	55.556	ENSGACG00000007581	hnrnpk	55	52.113
ENSGACG00000014955	-	94	33.750	ENSGACG00000005991	igf2bp2b	64	33.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000014955	-	99	78.889	ENSAPOG00000020003	pcbp3	88	78.889	Acanthochromis_polyacanthus
ENSGACG00000014955	-	97	81.586	ENSAPOG00000016582	-	100	77.747	Acanthochromis_polyacanthus
ENSGACG00000014955	-	98	80.392	ENSAMEG00000001697	-	99	77.236	Ailuropoda_melanoleuca
ENSGACG00000014955	-	100	77.747	ENSACIG00000002739	-	100	77.747	Amphilophus_citrinellus
ENSGACG00000014955	-	97	81.586	ENSACIG00000010933	pcbp3	95	81.586	Amphilophus_citrinellus
ENSGACG00000014955	-	97	82.436	ENSAOCG00000008592	-	98	82.436	Amphiprion_ocellaris
ENSGACG00000014955	-	96	78.947	ENSAOCG00000007806	-	100	78.947	Amphiprion_ocellaris
ENSGACG00000014955	-	100	78.022	ENSAPEG00000005209	-	100	78.022	Amphiprion_percula
ENSGACG00000014955	-	97	83.853	ENSAPEG00000008011	pcbp3	95	83.853	Amphiprion_percula
ENSGACG00000014955	-	97	81.870	ENSATEG00000015787	-	100	81.870	Anabas_testudineus
ENSGACG00000014955	-	100	77.747	ENSATEG00000009833	-	100	77.747	Anabas_testudineus
ENSGACG00000014955	-	98	79.109	ENSAPLG00000002975	-	98	79.109	Anas_platyrhynchos
ENSGACG00000014955	-	95	70.541	ENSAPLG00000008951	-	78	70.541	Anas_platyrhynchos
ENSGACG00000014955	-	98	80.392	ENSACAG00000004607	-	99	80.392	Anolis_carolinensis
ENSGACG00000014955	-	98	74.438	ENSACAG00000009819	-	98	74.438	Anolis_carolinensis
ENSGACG00000014955	-	96	76.071	ENSANAG00000030702	-	100	76.071	Aotus_nancymaae
ENSGACG00000014955	-	97	84.136	ENSACLG00000011835	pcbp3	95	84.136	Astatotilapia_calliptera
ENSGACG00000014955	-	100	79.396	ENSACLG00000003801	-	100	79.396	Astatotilapia_calliptera
ENSGACG00000014955	-	95	57.923	ENSAMXG00000001760	zgc:110045	72	57.923	Astyanax_mexicanus
ENSGACG00000014955	-	97	83.003	ENSAMXG00000003440	pcbp3	95	83.003	Astyanax_mexicanus
ENSGACG00000014955	-	97	76.989	ENSAMXG00000013588	-	100	76.989	Astyanax_mexicanus
ENSGACG00000014955	-	85	83.529	ENSCAFG00020019472	-	83	83.529	Canis_lupus_dingo
ENSGACG00000014955	-	98	78.992	ENSCSAG00000007440	-	89	78.992	Chlorocebus_sabaeus
ENSGACG00000014955	-	95	80.097	ENSCPBG00000000733	-	68	80.097	Chrysemys_picta_bellii
ENSGACG00000014955	-	98	78.992	ENSCPBG00000012151	-	99	78.992	Chrysemys_picta_bellii
ENSGACG00000014955	-	97	78.470	ENSCSEG00000000822	pcbp3	99	78.470	Cynoglossus_semilaevis
ENSGACG00000014955	-	100	68.108	ENSCSEG00000016984	-	100	68.108	Cynoglossus_semilaevis
ENSGACG00000014955	-	100	79.396	ENSCVAG00000005262	-	100	79.396	Cyprinodon_variegatus
ENSGACG00000014955	-	97	84.659	ENSCVAG00000014482	pcbp3	95	84.659	Cyprinodon_variegatus
ENSGACG00000014955	-	100	81.593	ENSDARG00000054378	pcbp3	100	81.593	Danio_rerio
ENSGACG00000014955	-	98	66.667	ENSETEG00000015988	-	98	66.667	Echinops_telfairi
ENSGACG00000014955	-	96	58.125	ENSEBUG00000016192	pcbp3	99	59.547	Eptatretus_burgeri
ENSGACG00000014955	-	71	62.357	ENSEBUG00000005495	pcbp3	71	62.357	Eptatretus_burgeri
ENSGACG00000014955	-	98	66.852	ENSEBUG00000007485	-	92	69.835	Eptatretus_burgeri
ENSGACG00000014955	-	97	82.254	ENSELUG00000003521	pcbp3	95	82.254	Esox_lucius
ENSGACG00000014955	-	97	81.303	ENSELUG00000001560	-	97	80.000	Esox_lucius
ENSGACG00000014955	-	97	79.545	ENSFALG00000003949	-	97	79.545	Ficedula_albicollis
ENSGACG00000014955	-	95	70.541	ENSFALG00000004411	-	74	70.541	Ficedula_albicollis
ENSGACG00000014955	-	100	77.473	ENSFHEG00000006539	-	100	77.473	Fundulus_heteroclitus
ENSGACG00000014955	-	97	80.398	ENSFHEG00000016615	pcbp3	95	80.398	Fundulus_heteroclitus
ENSGACG00000014955	-	96	66.856	ENSGMOG00000008611	-	100	66.856	Gadus_morhua
ENSGACG00000014955	-	100	79.946	ENSGMOG00000011992	pcbp3	100	79.946	Gadus_morhua
ENSGACG00000014955	-	98	78.652	ENSGALG00000004394	-	99	78.652	Gallus_gallus
ENSGACG00000014955	-	96	75.575	ENSGALG00000013155	-	98	73.410	Gallus_gallus
ENSGACG00000014955	-	100	78.571	ENSGAFG00000011430	pcbp3	99	78.571	Gambusia_affinis
ENSGACG00000014955	-	97	81.303	ENSGAFG00000010274	-	95	81.303	Gambusia_affinis
ENSGACG00000014955	-	79	72.766	ENSGAGG00000006956	-	93	72.766	Gopherus_agassizii
ENSGACG00000014955	-	92	72.168	ENSGAGG00000000271	-	100	72.168	Gopherus_agassizii
ENSGACG00000014955	-	97	84.375	ENSHBUG00000010697	pcbp3	95	84.375	Haplochromis_burtoni
ENSGACG00000014955	-	100	79.396	ENSHBUG00000021782	-	100	79.396	Haplochromis_burtoni
ENSGACG00000014955	-	97	84.091	ENSHCOG00000017868	pcbp3	95	84.091	Hippocampus_comes
ENSGACG00000014955	-	100	75.207	ENSHCOG00000006067	-	100	75.207	Hippocampus_comes
ENSGACG00000014955	-	100	80.769	ENSIPUG00000006238	pcbp3	100	80.769	Ictalurus_punctatus
ENSGACG00000014955	-	97	80.737	ENSKMAG00000018530	-	95	80.737	Kryptolebias_marmoratus
ENSGACG00000014955	-	97	83.569	ENSKMAG00000003046	pcbp3	95	83.569	Kryptolebias_marmoratus
ENSGACG00000014955	-	100	67.493	ENSLBEG00000006542	-	100	68.320	Labrus_bergylta
ENSGACG00000014955	-	97	79.887	ENSLBEG00000006201	pcbp3	95	79.887	Labrus_bergylta
ENSGACG00000014955	-	95	70.572	ENSLACG00000010804	zgc:110045	73	70.572	Latimeria_chalumnae
ENSGACG00000014955	-	98	75.000	ENSLACG00000010386	pcbp3	76	75.000	Latimeria_chalumnae
ENSGACG00000014955	-	98	80.672	ENSLOCG00000009369	pcbp3	99	80.672	Lepisosteus_oculatus
ENSGACG00000014955	-	95	75.291	ENSLOCG00000005058	zgc:110045	79	75.581	Lepisosteus_oculatus
ENSGACG00000014955	-	100	76.648	ENSMAMG00000011620	-	100	76.648	Mastacembelus_armatus
ENSGACG00000014955	-	97	80.398	ENSMAMG00000022336	pcbp3	93	80.398	Mastacembelus_armatus
ENSGACG00000014955	-	100	75.749	ENSMZEG00005014882	-	100	75.749	Maylandia_zebra
ENSGACG00000014955	-	99	80.447	ENSMZEG00005008993	pcbp3	100	80.447	Maylandia_zebra
ENSGACG00000014955	-	95	70.811	ENSMGAG00000006794	-	74	70.811	Meleagris_gallopavo
ENSGACG00000014955	-	98	74.317	ENSMGAG00000001883	-	98	74.324	Meleagris_gallopavo
ENSGACG00000014955	-	100	78.082	ENSMMOG00000000730	pcbp3	91	78.082	Mola_mola
ENSGACG00000014955	-	99	77.778	ENSMMOG00000005216	-	99	77.778	Mola_mola
ENSGACG00000014955	-	74	73.364	ENSMODG00000027884	-	93	73.364	Monodelphis_domestica
ENSGACG00000014955	-	97	81.073	ENSMALG00000000691	pcbp3	96	81.073	Monopterus_albus
ENSGACG00000014955	-	98	73.278	ENSMPUG00000001779	-	90	73.278	Mustela_putorius_furo
ENSGACG00000014955	-	97	77.839	ENSNBRG00000016714	-	99	75.346	Neolamprologus_brichardi
ENSGACG00000014955	-	97	81.818	ENSNBRG00000016409	-	95	81.818	Neolamprologus_brichardi
ENSGACG00000014955	-	95	80.233	ENSOPRG00000003431	-	99	80.233	Ochotona_princeps
ENSGACG00000014955	-	100	79.515	ENSONIG00000004611	-	100	79.515	Oreochromis_niloticus
ENSGACG00000014955	-	97	83.944	ENSONIG00000012122	-	98	83.944	Oreochromis_niloticus
ENSGACG00000014955	-	98	78.933	ENSOCUG00000002696	-	89	78.933	Oryctolagus_cuniculus
ENSGACG00000014955	-	100	79.670	ENSORLG00000022739	-	100	79.670	Oryzias_latipes
ENSGACG00000014955	-	97	82.436	ENSORLG00000000059	pcbp3	100	82.436	Oryzias_latipes
ENSGACG00000014955	-	100	79.396	ENSORLG00020006124	-	100	79.396	Oryzias_latipes_hni
ENSGACG00000014955	-	97	82.203	ENSORLG00020012671	pcbp3	98	82.203	Oryzias_latipes_hni
ENSGACG00000014955	-	97	81.303	ENSORLG00015008051	-	95	81.303	Oryzias_latipes_hsok
ENSGACG00000014955	-	97	82.203	ENSORLG00015000429	pcbp3	98	82.203	Oryzias_latipes_hsok
ENSGACG00000014955	-	100	79.396	ENSOMEG00000020162	-	100	79.396	Oryzias_melastigma
ENSGACG00000014955	-	93	79.385	ENSOMEG00000020811	pcbp3	98	79.385	Oryzias_melastigma
ENSGACG00000014955	-	98	78.947	ENSOGAG00000008044	-	99	78.947	Otolemur_garnettii
ENSGACG00000014955	-	72	74.146	ENSPKIG00000020913	-	88	74.146	Paramormyrops_kingsleyae
ENSGACG00000014955	-	97	81.250	ENSPKIG00000019329	pcbp3	100	77.747	Paramormyrops_kingsleyae
ENSGACG00000014955	-	91	70.722	ENSPSIG00000008350	-	67	70.722	Pelodiscus_sinensis
ENSGACG00000014955	-	98	70.604	ENSPSIG00000014970	-	98	70.604	Pelodiscus_sinensis
ENSGACG00000014955	-	97	83.898	ENSPMGG00000022383	pcbp3	96	83.898	Periophthalmus_magnuspinnatus
ENSGACG00000014955	-	95	62.069	ENSPMAG00000004551	pcbp3	88	62.069	Petromyzon_marinus
ENSGACG00000014955	-	67	84.043	ENSPMAG00000004637	-	97	84.043	Petromyzon_marinus
ENSGACG00000014955	-	98	80.672	ENSPCIG00000028092	-	99	80.672	Phascolarctos_cinereus
ENSGACG00000014955	-	99	81.389	ENSPLAG00000011449	pcbp3	90	81.389	Poecilia_latipinna
ENSGACG00000014955	-	99	78.830	ENSPLAG00000004074	-	92	78.830	Poecilia_latipinna
ENSGACG00000014955	-	97	82.633	ENSPMEG00000021239	pcbp3	96	82.633	Poecilia_mexicana
ENSGACG00000014955	-	99	79.666	ENSPMEG00000006653	-	99	79.666	Poecilia_mexicana
ENSGACG00000014955	-	97	78.310	ENSPREG00000015736	pcbp3	99	78.310	Poecilia_reticulata
ENSGACG00000014955	-	100	77.198	ENSPREG00000020585	-	95	82.479	Poecilia_reticulata
ENSGACG00000014955	-	100	77.198	ENSPNYG00000013205	-	100	77.198	Pundamilia_nyererei
ENSGACG00000014955	-	99	78.393	ENSPNYG00000012326	pcbp3	98	78.393	Pundamilia_nyererei
ENSGACG00000014955	-	100	79.945	ENSPNAG00000015104	pcbp3	100	79.945	Pygocentrus_nattereri
ENSGACG00000014955	-	97	81.921	ENSPNAG00000008541	-	95	81.921	Pygocentrus_nattereri
ENSGACG00000014955	-	98	78.992	ENSRNOG00000001245	Pcbp3	98	78.992	Rattus_norvegicus
ENSGACG00000014955	-	98	71.196	ENSRBIG00000028177	-	99	71.196	Rhinopithecus_bieti
ENSGACG00000014955	-	98	79.494	ENSSHAG00000007890	-	99	79.494	Sarcophilus_harrisii
ENSGACG00000014955	-	97	81.818	ENSSFOG00015014706	pcbp3	95	81.818	Scleropages_formosus
ENSGACG00000014955	-	95	70.640	ENSSFOG00015007118	-	93	70.640	Scleropages_formosus
ENSGACG00000014955	-	97	81.818	ENSSFOG00015010205	pcbp3	100	81.250	Scleropages_formosus
ENSGACG00000014955	-	100	79.121	ENSSMAG00000003135	-	100	79.121	Scophthalmus_maximus
ENSGACG00000014955	-	97	80.170	ENSSMAG00000011929	pcbp3	97	80.170	Scophthalmus_maximus
ENSGACG00000014955	-	97	82.386	ENSSDUG00000011608	pcbp3	99	82.386	Seriola_dumerili
ENSGACG00000014955	-	97	77.620	ENSSDUG00000008502	-	98	74.783	Seriola_dumerili
ENSGACG00000014955	-	97	81.586	ENSSLDG00000020161	-	95	81.586	Seriola_lalandi_dorsalis
ENSGACG00000014955	-	97	82.386	ENSSLDG00000008518	pcbp3	99	82.386	Seriola_lalandi_dorsalis
ENSGACG00000014955	-	93	72.581	ENSSPUG00000013214	-	91	79.208	Sphenodon_punctatus
ENSGACG00000014955	-	97	71.105	ENSSPAG00000023341	-	95	71.105	Stegastes_partitus
ENSGACG00000014955	-	96	79.257	ENSSPAG00000004190	-	100	79.257	Stegastes_partitus
ENSGACG00000014955	-	98	73.109	ENSTGUG00000008158	-	99	73.109	Taeniopygia_guttata
ENSGACG00000014955	-	98	75.910	ENSTGUG00000003316	-	99	75.910	Taeniopygia_guttata
ENSGACG00000014955	-	97	81.020	ENSTRUG00000013604	pcbp3	100	84.649	Takifugu_rubripes
ENSGACG00000014955	-	96	77.946	ENSTRUG00000006280	-	92	77.946	Takifugu_rubripes
ENSGACG00000014955	-	98	80.056	ENSTTRG00000015075	-	99	80.056	Tursiops_truncatus
ENSGACG00000014955	-	98	76.839	ENSXETG00000011483	pcbp1	99	76.839	Xenopus_tropicalis
ENSGACG00000014955	-	91	69.492	ENSXETG00000010491	pcbp2	74	69.492	Xenopus_tropicalis
ENSGACG00000014955	-	97	82.633	ENSXCOG00000020481	pcbp3	96	82.633	Xiphophorus_couchianus
ENSGACG00000014955	-	97	83.853	ENSXMAG00000008175	pcbp3	95	83.853	Xiphophorus_maculatus
ENSGACG00000014955	-	100	79.339	ENSXMAG00000028711	-	100	79.339	Xiphophorus_maculatus