EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000014978 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 571 bases
Position: chrgroupII:5679658-5680228
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000019756	RRM_1	PF00076.22	4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000019794	-	507	-	ENSGACP00000019756	168 (aa)	-	G3PQ71

Gene Model

Click here to download ENSGACG00000014978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000014978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000014978	-	58	46.479	ENSGACG00000004477	hnrnpa3	50	44.737
ENSGACG00000014978	-	51	34.091	ENSGACG00000001473	-	56	33.784
ENSGACG00000014978	-	66	34.722	ENSGACG00000013329	-	62	41.333
ENSGACG00000014978	-	60	34.409	ENSGACG00000019028	rbm14b	61	35.000
ENSGACG00000014978	-	51	36.620	ENSGACG00000003274	celf3a	50	37.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000014978	-	51	88.372	ENSACIG00000016116	cirbpa	100	58.152	Amphilophus_citrinellus
ENSGACG00000014978	-	100	61.202	ENSATEG00000014985	cirbpa	100	61.749	Anabas_testudineus
ENSGACG00000014978	-	100	59.686	ENSCVAG00000004853	cirbpa	100	59.459	Cyprinodon_variegatus
ENSGACG00000014978	-	100	60.116	ENSELUG00000009891	cirbpa	90	60.116	Esox_lucius
ENSGACG00000014978	-	98	63.253	ENSFHEG00000002580	cirbpa	100	63.253	Fundulus_heteroclitus
ENSGACG00000014978	-	100	62.162	ENSGAFG00000008654	cirbpa	98	63.587	Gambusia_affinis
ENSGACG00000014978	-	100	57.143	ENSLBEG00000000292	cirbpa	100	60.819	Labrus_bergylta
ENSGACG00000014978	-	51	82.558	ENSMAMG00000010168	cirbpa	100	59.890	Mastacembelus_armatus
ENSGACG00000014978	-	100	63.218	ENSORLG00000015433	cirbpa	100	63.793	Oryzias_latipes
ENSGACG00000014978	-	100	63.218	ENSORLG00020016909	cirbpa	100	63.793	Oryzias_latipes_hni
ENSGACG00000014978	-	100	63.218	ENSORLG00015016636	cirbpa	100	63.793	Oryzias_latipes_hsok
ENSGACG00000014978	-	58	82.178	ENSPMGG00000017342	cirbpa	93	57.377	Periophthalmus_magnuspinnatus
ENSGACG00000014978	-	99	63.736	ENSPREG00000018042	cirbpa	98	64.835	Poecilia_reticulata
ENSGACG00000014978	-	100	64.286	ENSSPAG00000023037	cirbpa	99	61.310	Stegastes_partitus
ENSGACG00000014978	-	100	49.462	ENSTRUG00000010187	cirbpa	61	79.518	Takifugu_rubripes
ENSGACG00000014978	-	99	63.187	ENSXCOG00000008262	cirbpa	92	83.562	Xiphophorus_couchianus
ENSGACG00000014978	-	100	62.842	ENSXMAG00000019336	cirbpa	100	63.934	Xiphophorus_maculatus