EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000014987 (Gene tree)
Gene ID: -
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: TSEN54 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3792 bases
Position: chrgroupXI:16469732-16473523
Accession: ZDB-GENE-050522-454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000019771	tRNA_int_end_N2	PF12928.7	1.2e-19	1	1
ENSGACP00000019773	tRNA_int_end_N2	PF12928.7	1.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000019811	-	1592	-	ENSGACP00000019773	464 (aa)	-	G3PQ88
ENSGACT00000019809	-	1616	-	ENSGACP00000019771	468 (aa)	-	G3PQ86

Gene Model

Click here to download ENSGACG00000014987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000014987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000014987	tsen54	99	44.788	ENSG00000182173	TSEN54	99	52.632	Homo_sapiens
ENSGACG00000014987	tsen54	100	68.347	ENSAPOG00000009659	tsen54	100	64.649	Acanthochromis_polyacanthus
ENSGACG00000014987	tsen54	99	43.822	ENSAMEG00000009414	TSEN54	96	45.681	Ailuropoda_melanoleuca
ENSGACG00000014987	tsen54	100	67.944	ENSAOCG00000000152	tsen54	95	67.944	Amphiprion_ocellaris
ENSGACG00000014987	tsen54	100	67.540	ENSAPEG00000018931	tsen54	94	67.540	Amphiprion_percula
ENSGACG00000014987	tsen54	100	63.443	ENSATEG00000019860	tsen54	97	63.830	Anabas_testudineus
ENSGACG00000014987	tsen54	88	44.469	ENSAPLG00000009419	TSEN54	99	44.252	Anas_platyrhynchos
ENSGACG00000014987	tsen54	100	45.857	ENSACAG00000006714	TSEN54	97	46.435	Anolis_carolinensis
ENSGACG00000014987	tsen54	99	43.822	ENSANAG00000024061	TSEN54	95	45.873	Aotus_nancymaae
ENSGACG00000014987	tsen54	100	64.811	ENSACLG00000019800	tsen54	96	65.408	Astatotilapia_calliptera
ENSGACG00000014987	tsen54	99	52.988	ENSAMXG00000006546	tsen54	96	53.507	Astyanax_mexicanus
ENSGACG00000014987	tsen54	84	57.714	ENSBTAG00000000824	TSEN54	96	44.402	Bos_taurus
ENSGACG00000014987	tsen54	99	43.822	ENSCJAG00000014278	TSEN54	95	45.489	Callithrix_jacchus
ENSGACG00000014987	tsen54	99	42.967	ENSCAFG00000004798	TSEN54	96	44.338	Canis_familiaris
ENSGACG00000014987	tsen54	99	42.967	ENSCAFG00020000312	TSEN54	96	44.338	Canis_lupus_dingo
ENSGACG00000014987	tsen54	99	44.118	ENSCHIG00000019908	TSEN54	96	44.706	Capra_hircus
ENSGACG00000014987	tsen54	88	40.948	ENSTSYG00000037439	TSEN54	99	42.026	Carlito_syrichta
ENSGACG00000014987	tsen54	99	44.914	ENSCCAG00000036624	TSEN54	95	45.298	Cebus_capucinus
ENSGACG00000014987	tsen54	99	44.914	ENSCATG00000042877	TSEN54	95	44.530	Cercocebus_atys
ENSGACG00000014987	tsen54	99	44.423	ENSCLAG00000002924	TSEN54	96	44.423	Chinchilla_lanigera
ENSGACG00000014987	tsen54	99	44.595	ENSCSAG00000004809	TSEN54	96	44.208	Chlorocebus_sabaeus
ENSGACG00000014987	tsen54	99	45.507	ENSCPBG00000028071	TSEN54	97	45.315	Chrysemys_picta_bellii
ENSGACG00000014987	tsen54	99	44.722	ENSCANG00000028053	TSEN54	96	44.530	Colobus_angolensis_palliatus
ENSGACG00000014987	tsen54	99	43.495	ENSCGRG00001020029	Tsen54	96	43.495	Cricetulus_griseus_chok1gshd
ENSGACG00000014987	tsen54	86	41.556	ENSCGRG00000016289	Tsen54	99	41.556	Cricetulus_griseus_crigri
ENSGACG00000014987	tsen54	82	53.222	ENSCSEG00000020586	tsen54	99	53.222	Cynoglossus_semilaevis
ENSGACG00000014987	tsen54	82	52.709	ENSDARG00000036844	tsen54	100	52.956	Danio_rerio
ENSGACG00000014987	tsen54	99	43.212	ENSDNOG00000018452	TSEN54	96	45.124	Dasypus_novemcinctus
ENSGACG00000014987	tsen54	99	44.123	ENSDORG00000004073	Tsen54	96	44.123	Dipodomys_ordii
ENSGACG00000014987	tsen54	71	52.336	ENSEBUG00000005203	TSEN54	61	52.336	Eptatretus_burgeri
ENSGACG00000014987	tsen54	99	45.174	ENSEASG00005000579	TSEN54	96	44.316	Equus_asinus_asinus
ENSGACG00000014987	tsen54	99	44.828	ENSECAG00000004924	TSEN54	96	43.931	Equus_caballus
ENSGACG00000014987	tsen54	88	40.851	ENSEEUG00000008467	TSEN54	99	42.735	Erinaceus_europaeus
ENSGACG00000014987	tsen54	99	55.133	ENSELUG00000017703	tsen54	89	55.598	Esox_lucius
ENSGACG00000014987	tsen54	99	44.316	ENSFCAG00000023712	TSEN54	97	44.722	Felis_catus
ENSGACG00000014987	tsen54	96	44.399	ENSFALG00000001119	TSEN54	92	44.196	Ficedula_albicollis
ENSGACG00000014987	tsen54	88	43.319	ENSFDAG00000019090	TSEN54	99	43.319	Fukomys_damarensis
ENSGACG00000014987	tsen54	100	65.650	ENSFHEG00000005470	tsen54	96	65.854	Fundulus_heteroclitus
ENSGACG00000014987	tsen54	99	49.677	ENSGMOG00000013146	tsen54	99	48.817	Gadus_morhua
ENSGACG00000014987	tsen54	96	41.617	ENSGALG00000047163	TSEN54	96	41.420	Gallus_gallus
ENSGACG00000014987	tsen54	100	64.490	ENSGAFG00000005111	tsen54	96	64.694	Gambusia_affinis
ENSGACG00000014987	tsen54	99	46.228	ENSGAGG00000006825	TSEN54	96	45.648	Gopherus_agassizii
ENSGACG00000014987	tsen54	99	44.788	ENSGGOG00000009417	TSEN54	99	44.402	Gorilla_gorilla
ENSGACG00000014987	tsen54	89	63.135	ENSHBUG00000018296	tsen54	99	54.798	Haplochromis_burtoni
ENSGACG00000014987	tsen54	99	45.594	ENSHGLG00000007979	TSEN54	96	45.594	Heterocephalus_glaber_female
ENSGACG00000014987	tsen54	99	44.828	ENSHGLG00100005497	TSEN54	96	44.828	Heterocephalus_glaber_male
ENSGACG00000014987	tsen54	82	60.048	ENSHCOG00000007481	tsen54	100	60.775	Hippocampus_comes
ENSGACG00000014987	tsen54	99	51.020	ENSIPUG00000000590	tsen54	96	50.816	Ictalurus_punctatus
ENSGACG00000014987	tsen54	99	44.681	ENSSTOG00000012883	TSEN54	96	44.487	Ictidomys_tridecemlineatus
ENSGACG00000014987	tsen54	99	43.243	ENSJJAG00000007365	Tsen54	96	43.050	Jaculus_jaculus
ENSGACG00000014987	tsen54	100	62.768	ENSKMAG00000006944	tsen54	97	62.818	Kryptolebias_marmoratus
ENSGACG00000014987	tsen54	100	62.846	ENSLBEG00000004199	tsen54	97	63.386	Labrus_bergylta
ENSGACG00000014987	tsen54	99	39.539	ENSLACG00000009497	TSEN54	99	39.231	Latimeria_chalumnae
ENSGACG00000014987	tsen54	99	51.737	ENSLOCG00000011191	tsen54	96	52.427	Lepisosteus_oculatus
ENSGACG00000014987	tsen54	80	56.209	ENSLAFG00000011655	TSEN54	92	43.992	Loxodonta_africana
ENSGACG00000014987	tsen54	99	44.595	ENSMFAG00000000712	TSEN54	96	44.208	Macaca_fascicularis
ENSGACG00000014987	tsen54	99	44.595	ENSMNEG00000029199	TSEN54	96	44.208	Macaca_nemestrina
ENSGACG00000014987	tsen54	88	43.074	ENSMLEG00000044168	TSEN54	88	42.641	Mandrillus_leucophaeus
ENSGACG00000014987	tsen54	100	67.273	ENSMAMG00000019773	tsen54	97	67.475	Mastacembelus_armatus
ENSGACG00000014987	tsen54	100	65.010	ENSMZEG00005000884	tsen54	96	65.606	Maylandia_zebra
ENSGACG00000014987	tsen54	96	42.829	ENSMGAG00000009556	TSEN54	92	42.972	Meleagris_gallopavo
ENSGACG00000014987	tsen54	99	43.615	ENSMAUG00000016838	Tsen54	96	43.359	Mesocricetus_auratus
ENSGACG00000014987	tsen54	99	45.618	ENSMICG00000044012	TSEN54	96	46.032	Microcebus_murinus
ENSGACG00000014987	tsen54	99	44.466	ENSMOCG00000021585	Tsen54	96	43.883	Microtus_ochrogaster
ENSGACG00000014987	tsen54	99	64.482	ENSMMOG00000020189	tsen54	99	65.539	Mola_mola
ENSGACG00000014987	tsen54	99	43.396	ENSMODG00000007438	TSEN54	95	43.208	Monodelphis_domestica
ENSGACG00000014987	tsen54	99	65.619	ENSMALG00000020573	tsen54	96	65.941	Monopterus_albus
ENSGACG00000014987	tsen54	99	43.798	MGP_CAROLIEiJ_G0017417	Tsen54	96	43.798	Mus_caroli
ENSGACG00000014987	tsen54	99	43.992	ENSMUSG00000020781	Tsen54	96	43.992	Mus_musculus
ENSGACG00000014987	tsen54	99	44.788	MGP_PahariEiJ_G0018547	Tsen54	96	44.788	Mus_pahari
ENSGACG00000014987	tsen54	99	44.208	MGP_SPRETEiJ_G0018262	Tsen54	96	44.208	Mus_spretus
ENSGACG00000014987	tsen54	99	42.885	ENSMPUG00000013870	TSEN54	96	43.243	Mustela_putorius_furo
ENSGACG00000014987	tsen54	99	43.086	ENSMLUG00000015298	TSEN54	96	44.088	Myotis_lucifugus
ENSGACG00000014987	tsen54	99	44.706	ENSNGAG00000015673	Tsen54	96	44.706	Nannospalax_galili
ENSGACG00000014987	tsen54	91	42.161	ENSMEUG00000011908	TSEN54	99	42.161	Notamacropus_eugenii
ENSGACG00000014987	tsen54	99	43.426	ENSOPRG00000012513	TSEN54	96	43.513	Ochotona_princeps
ENSGACG00000014987	tsen54	100	65.743	ENSONIG00000009543	tsen54	96	65.743	Oreochromis_niloticus
ENSGACG00000014987	tsen54	99	42.085	ENSOCUG00000009875	TSEN54	96	42.035	Oryctolagus_cuniculus
ENSGACG00000014987	tsen54	100	60.619	ENSORLG00000000852	tsen54	97	60.663	Oryzias_latipes
ENSGACG00000014987	tsen54	100	61.031	ENSORLG00020018221	tsen54	97	61.077	Oryzias_latipes_hni
ENSGACG00000014987	tsen54	100	60.825	ENSORLG00015009413	tsen54	98	60.870	Oryzias_latipes_hsok
ENSGACG00000014987	tsen54	100	61.491	ENSOMEG00000014402	tsen54	94	61.491	Oryzias_melastigma
ENSGACG00000014987	tsen54	99	44.814	ENSOGAG00000001442	TSEN54	96	44.618	Otolemur_garnettii
ENSGACG00000014987	tsen54	73	53.782	ENSOARG00000010361	TSEN54	99	40.909	Ovis_aries
ENSGACG00000014987	tsen54	97	44.071	ENSPPAG00000043519	TSEN54	99	45.347	Pan_paniscus
ENSGACG00000014987	tsen54	99	44.316	ENSPPRG00000009162	TSEN54	97	45.298	Panthera_pardus
ENSGACG00000014987	tsen54	88	43.107	ENSPTIG00000019312	TSEN54	96	44.227	Panthera_tigris_altaica
ENSGACG00000014987	tsen54	99	44.788	ENSPTRG00000009646	TSEN54	96	44.402	Pan_troglodytes
ENSGACG00000014987	tsen54	99	44.595	ENSPANG00000020133	TSEN54	96	44.378	Papio_anubis
ENSGACG00000014987	tsen54	99	51.963	ENSPKIG00000023018	tsen54	99	50.943	Paramormyrops_kingsleyae
ENSGACG00000014987	tsen54	82	42.558	ENSPSIG00000012807	TSEN54	100	41.860	Pelodiscus_sinensis
ENSGACG00000014987	tsen54	97	49.679	ENSPMGG00000019578	tsen54	100	49.679	Periophthalmus_magnuspinnatus
ENSGACG00000014987	tsen54	99	44.272	ENSPEMG00000014857	Tsen54	96	44.272	Peromyscus_maniculatus_bairdii
ENSGACG00000014987	tsen54	100	64.777	ENSPFOG00000022740	tsen54	96	64.980	Poecilia_formosa
ENSGACG00000014987	tsen54	100	65.306	ENSPLAG00000014847	tsen54	96	65.510	Poecilia_latipinna
ENSGACG00000014987	tsen54	100	65.102	ENSPMEG00000022876	tsen54	96	65.306	Poecilia_mexicana
ENSGACG00000014987	tsen54	100	64.754	ENSPREG00000013090	tsen54	96	64.959	Poecilia_reticulata
ENSGACG00000014987	tsen54	94	45.934	ENSPPYG00000008629	TSEN54	99	45.610	Pongo_abelii
ENSGACG00000014987	tsen54	84	56.849	ENSPCAG00000002093	TSEN54	76	58.571	Procavia_capensis
ENSGACG00000014987	tsen54	99	44.055	ENSPCOG00000027880	TSEN54	97	45.631	Propithecus_coquereli
ENSGACG00000014987	tsen54	99	44.146	ENSPVAG00000008446	TSEN54	96	44.722	Pteropus_vampyrus
ENSGACG00000014987	tsen54	97	63.415	ENSPNYG00000010217	tsen54	100	64.024	Pundamilia_nyererei
ENSGACG00000014987	tsen54	99	51.468	ENSPNAG00000003770	tsen54	96	51.663	Pygocentrus_nattereri
ENSGACG00000014987	tsen54	99	44.338	ENSRNOG00000004598	Tsen54	96	44.338	Rattus_norvegicus
ENSGACG00000014987	tsen54	99	44.530	ENSRBIG00000043040	TSEN54	96	44.338	Rhinopithecus_bieti
ENSGACG00000014987	tsen54	99	44.530	ENSRROG00000030797	TSEN54	96	44.338	Rhinopithecus_roxellana
ENSGACG00000014987	tsen54	99	43.555	ENSSBOG00000013543	TSEN54	95	45.049	Saimiri_boliviensis_boliviensis
ENSGACG00000014987	tsen54	99	42.075	ENSSHAG00000018127	TSEN54	95	42.075	Sarcophilus_harrisii
ENSGACG00000014987	tsen54	82	49.764	ENSSFOG00015004093	tsen54	99	50.000	Scleropages_formosus
ENSGACG00000014987	tsen54	99	64.497	ENSSMAG00000012449	tsen54	97	64.892	Scophthalmus_maximus
ENSGACG00000014987	tsen54	100	68.972	ENSSDUG00000021506	tsen54	97	68.972	Seriola_dumerili
ENSGACG00000014987	tsen54	100	68.775	ENSSLDG00000016303	tsen54	97	68.775	Seriola_lalandi_dorsalis
ENSGACG00000014987	tsen54	81	43.294	ENSSPUG00000008988	TSEN54	96	42.824	Sphenodon_punctatus
ENSGACG00000014987	tsen54	97	68.288	ENSSPAG00000008098	-	100	68.288	Stegastes_partitus
ENSGACG00000014987	tsen54	82	63.409	ENSSPAG00000008047	tsen54	100	63.409	Stegastes_partitus
ENSGACG00000014987	tsen54	99	44.595	ENSSSCG00000036852	TSEN54	96	44.788	Sus_scrofa
ENSGACG00000014987	tsen54	88	43.326	ENSTGUG00000008548	TSEN54	99	43.107	Taeniopygia_guttata
ENSGACG00000014987	tsen54	100	64.033	ENSTRUG00000004230	tsen54	96	64.033	Takifugu_rubripes
ENSGACG00000014987	tsen54	100	58.835	ENSTNIG00000011281	tsen54	98	59.400	Tetraodon_nigroviridis
ENSGACG00000014987	tsen54	88	41.935	ENSTTRG00000015828	TSEN54	99	42.612	Tursiops_truncatus
ENSGACG00000014987	tsen54	82	40.319	ENSUAMG00000010045	TSEN54	99	41.230	Ursus_americanus
ENSGACG00000014987	tsen54	70	57.009	ENSUMAG00000008979	TSEN54	99	43.107	Ursus_maritimus
ENSGACG00000014987	tsen54	99	42.248	ENSVVUG00000011411	TSEN54	97	43.822	Vulpes_vulpes
ENSGACG00000014987	tsen54	100	42.970	ENSXETG00000012532	tsen54	99	60.000	Xenopus_tropicalis
ENSGACG00000014987	tsen54	100	59.414	ENSXCOG00000018245	tsen54	99	59.623	Xiphophorus_couchianus
ENSGACG00000014987	tsen54	100	64.694	ENSXMAG00000018818	tsen54	96	64.898	Xiphophorus_maculatus