EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000015206 (Gene tree)
Gene ID: -
Gene Symbol: cirbpa
Alias: cirbp|wu:fb12c11|wu:fi20g12|zgc:136559
Full Name: cold inducible RNA binding protein a
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2906 bases
Position: chrgroupIII:7217340-7220245
Accession: ZDB-GENE-050417-329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000020054	RRM_1	PF00076.22	3.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000020093	-	1132	-	ENSGACP00000020054	190 (aa)	-	G3PR19

Gene Model

Click here to download ENSGACG00000015206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000015206's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000015206	cirbpa	55	38.889	ENSGACG00000013329	-	62	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000015206	cirbpa	100	61.856	ENSACIG00000016116	cirbpa	100	62.694	Amphilophus_citrinellus
ENSGACG00000015206	cirbpa	100	61.579	ENSAOCG00000016212	cirbpa	100	60.302	Amphiprion_ocellaris
ENSGACG00000015206	cirbpa	100	62.632	ENSAPEG00000011989	cirbpa	100	61.307	Amphiprion_percula
ENSGACG00000015206	cirbpa	100	70.000	ENSATEG00000014985	cirbpa	100	66.667	Anabas_testudineus
ENSGACG00000015206	cirbpa	100	61.856	ENSACLG00000002094	-	100	63.212	Astatotilapia_calliptera
ENSGACG00000015206	cirbpa	100	50.971	ENSAMXG00000015612	cirbpb	84	57.212	Astyanax_mexicanus
ENSGACG00000015206	cirbpa	100	60.513	ENSCSEG00000014344	cirbpa	100	60.513	Cynoglossus_semilaevis
ENSGACG00000015206	cirbpa	100	70.526	ENSCVAG00000004853	cirbpa	100	64.211	Cyprinodon_variegatus
ENSGACG00000015206	cirbpa	99	68.783	ENSFHEG00000002580	cirbpa	100	65.241	Fundulus_heteroclitus
ENSGACG00000015206	cirbpa	98	53.234	ENSGMOG00000007179	cirbpb	97	51.000	Gadus_morhua
ENSGACG00000015206	cirbpa	100	58.333	ENSGMOG00000012137	cirbpa	100	60.938	Gadus_morhua
ENSGACG00000015206	cirbpa	100	71.053	ENSGAFG00000008654	cirbpa	100	70.681	Gambusia_affinis
ENSGACG00000015206	cirbpa	100	59.694	ENSHBUG00000022060	cirbpa	100	62.694	Haplochromis_burtoni
ENSGACG00000015206	cirbpa	98	65.426	ENSKMAG00000005905	cirbpa	99	62.632	Kryptolebias_marmoratus
ENSGACG00000015206	cirbpa	100	57.812	ENSLBEG00000000292	cirbpa	100	59.896	Labrus_bergylta
ENSGACG00000015206	cirbpa	100	66.842	ENSMAMG00000010168	cirbpa	100	66.492	Mastacembelus_armatus
ENSGACG00000015206	cirbpa	100	59.694	ENSMZEG00005025577	-	100	62.694	Maylandia_zebra
ENSGACG00000015206	cirbpa	100	65.263	ENSMALG00000020092	cirbpa	100	64.921	Monopterus_albus
ENSGACG00000015206	cirbpa	100	59.694	ENSNBRG00000019658	cirbpa	100	62.694	Neolamprologus_brichardi
ENSGACG00000015206	cirbpa	100	60.825	ENSONIG00000010169	cirbpa	100	62.176	Oreochromis_niloticus
ENSGACG00000015206	cirbpa	100	67.368	ENSORLG00000015433	cirbpa	100	64.767	Oryzias_latipes
ENSGACG00000015206	cirbpa	100	67.368	ENSORLG00020016909	cirbpa	100	64.767	Oryzias_latipes_hni
ENSGACG00000015206	cirbpa	100	67.368	ENSORLG00015016636	cirbpa	100	64.767	Oryzias_latipes_hsok
ENSGACG00000015206	cirbpa	100	67.895	ENSOMEG00000021469	cirbpa	73	64.737	Oryzias_melastigma
ENSGACG00000015206	cirbpa	98	65.426	ENSPMGG00000017342	cirbpa	94	62.963	Periophthalmus_magnuspinnatus
ENSGACG00000015206	cirbpa	100	71.204	ENSPFOG00000015653	cirbpa	100	68.063	Poecilia_formosa
ENSGACG00000015206	cirbpa	99	71.429	ENSPLAG00000011125	cirbpa	100	68.063	Poecilia_latipinna
ENSGACG00000015206	cirbpa	100	71.579	ENSPMEG00000013878	cirbpa	100	68.063	Poecilia_mexicana
ENSGACG00000015206	cirbpa	98	72.043	ENSPREG00000018042	cirbpa	98	68.421	Poecilia_reticulata
ENSGACG00000015206	cirbpa	100	59.694	ENSPNYG00000007198	-	100	62.694	Pundamilia_nyererei
ENSGACG00000015206	cirbpa	100	56.098	ENSPNAG00000019997	cirbpb	100	53.171	Pygocentrus_nattereri
ENSGACG00000015206	cirbpa	100	67.337	ENSSMAG00000002412	cirbpa	100	65.152	Scophthalmus_maximus
ENSGACG00000015206	cirbpa	100	54.211	ENSSDUG00000016099	cirbpa	100	55.497	Seriola_dumerili
ENSGACG00000015206	cirbpa	100	62.304	ENSSPAG00000023037	cirbpa	99	58.639	Stegastes_partitus
ENSGACG00000015206	cirbpa	100	62.632	ENSTRUG00000010187	cirbpa	100	59.375	Takifugu_rubripes
ENSGACG00000015206	cirbpa	100	63.351	ENSTNIG00000000450	cirbpa	100	64.062	Tetraodon_nigroviridis
ENSGACG00000015206	cirbpa	98	70.968	ENSXCOG00000008262	cirbpa	92	84.932	Xiphophorus_couchianus
ENSGACG00000015206	cirbpa	100	70.526	ENSXMAG00000019336	cirbpa	100	70.157	Xiphophorus_maculatus