EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000015224 (Gene tree)
Gene ID: -
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 8869 bases
Position: chrscaffold_68:795022-803890
Accession: ZDB-GENE-030131-5923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000020075	RRM_1	PF00076.22	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000020114	-	618	-	ENSGACP00000020075	205 (aa)	-	G3PR40

Gene Model

Click here to download ENSGACG00000015224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000015224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000015224	rbm38	89	61.809	ENSGACG00000008472	rbm24b	91	63.462
ENSGACG00000015224	rbm38	51	36.047	ENSGACG00000008259	dazap1	51	36.047
ENSGACG00000015224	rbm38	77	67.073	ENSGACG00000005383	rbm24a	100	60.889
ENSGACG00000015224	rbm38	99	68.349	ENSGACG00000009873	-	100	68.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000015224	rbm38	98	62.736	ENSG00000132819	RBM38	94	81.197	Homo_sapiens
ENSGACG00000015224	rbm38	100	71.226	ENSAPOG00000009939	-	94	71.226	Acanthochromis_polyacanthus
ENSGACG00000015224	rbm38	100	81.466	ENSAPOG00000003301	rbm38	93	81.466	Acanthochromis_polyacanthus
ENSGACG00000015224	rbm38	100	68.950	ENSACIG00000012502	-	100	83.761	Amphilophus_citrinellus
ENSGACG00000015224	rbm38	100	78.970	ENSACIG00000000010	rbm38	93	78.970	Amphilophus_citrinellus
ENSGACG00000015224	rbm38	100	81.897	ENSAOCG00000013497	-	93	81.897	Amphiprion_ocellaris
ENSGACG00000015224	rbm38	99	70.142	ENSAOCG00000012559	RBM38	90	71.090	Amphiprion_ocellaris
ENSGACG00000015224	rbm38	100	65.517	ENSAPEG00000023581	-	95	66.379	Amphiprion_percula
ENSGACG00000015224	rbm38	100	87.204	ENSAPEG00000013137	rbm38	90	87.204	Amphiprion_percula
ENSGACG00000015224	rbm38	100	83.105	ENSATEG00000016366	rbm38	94	83.105	Anabas_testudineus
ENSGACG00000015224	rbm38	100	66.810	ENSATEG00000016710	-	95	66.810	Anabas_testudineus
ENSGACG00000015224	rbm38	100	61.468	ENSACAG00000016238	RBM38	90	60.909	Anolis_carolinensis
ENSGACG00000015224	rbm38	98	63.679	ENSANAG00000031959	RBM38	80	85.714	Aotus_nancymaae
ENSGACG00000015224	rbm38	100	65.948	ENSACLG00000019514	-	95	65.948	Astatotilapia_calliptera
ENSGACG00000015224	rbm38	98	59.535	ENSAMXG00000038120	rbm38	92	59.535	Astyanax_mexicanus
ENSGACG00000015224	rbm38	87	74.033	ENSAMXG00000015601	-	94	65.179	Astyanax_mexicanus
ENSGACG00000015224	rbm38	98	63.208	ENSBTAG00000008105	RBM38	89	63.208	Bos_taurus
ENSGACG00000015224	rbm38	82	50.521	WBGene00006321	sup-12	68	71.569	Caenorhabditis_elegans
ENSGACG00000015224	rbm38	98	62.736	ENSCJAG00000019139	RBM38	80	85.714	Callithrix_jacchus
ENSGACG00000015224	rbm38	98	63.679	ENSCAFG00020021943	RBM38	89	63.679	Canis_lupus_dingo
ENSGACG00000015224	rbm38	98	62.264	ENSCHIG00000002609	RBM38	89	62.264	Capra_hircus
ENSGACG00000015224	rbm38	98	63.208	ENSCPOG00000012781	RBM38	89	63.208	Cavia_porcellus
ENSGACG00000015224	rbm38	98	62.736	ENSCCAG00000036872	RBM38	80	85.714	Cebus_capucinus
ENSGACG00000015224	rbm38	98	63.333	ENSCATG00000032133	RBM38	80	85.714	Cercocebus_atys
ENSGACG00000015224	rbm38	98	62.736	ENSCLAG00000005906	RBM38	92	62.736	Chinchilla_lanigera
ENSGACG00000015224	rbm38	98	63.333	ENSCSAG00000015503	RBM38	89	63.333	Chlorocebus_sabaeus
ENSGACG00000015224	rbm38	100	61.751	ENSCPBG00000024059	RBM38	100	61.751	Chrysemys_picta_bellii
ENSGACG00000015224	rbm38	72	61.039	ENSCSAVG00000001132	-	58	61.039	Ciona_savignyi
ENSGACG00000015224	rbm38	98	49.515	ENSCANG00000030105	-	78	49.515	Colobus_angolensis_palliatus
ENSGACG00000015224	rbm38	98	61.792	ENSCGRG00001012928	Rbm38	89	62.736	Cricetulus_griseus_chok1gshd
ENSGACG00000015224	rbm38	99	70.561	ENSCSEG00000004701	-	93	70.561	Cynoglossus_semilaevis
ENSGACG00000015224	rbm38	87	70.109	ENSCSEG00000020943	rbm38	61	70.652	Cynoglossus_semilaevis
ENSGACG00000015224	rbm38	100	73.820	ENSCVAG00000015952	rbm38	93	73.820	Cyprinodon_variegatus
ENSGACG00000015224	rbm38	100	64.655	ENSCVAG00000005472	-	95	64.655	Cyprinodon_variegatus
ENSGACG00000015224	rbm38	87	74.444	ENSDARG00000058818	rbm38	76	74.444	Danio_rerio
ENSGACG00000015224	rbm38	98	63.592	ENSDNOG00000032004	RBM38	98	63.592	Dasypus_novemcinctus
ENSGACG00000015224	rbm38	98	63.679	ENSECAG00000007700	RBM38	89	63.679	Equus_caballus
ENSGACG00000015224	rbm38	97	62.911	ENSEEUG00000013489	RBM38	89	62.736	Erinaceus_europaeus
ENSGACG00000015224	rbm38	100	66.234	ENSELUG00000005849	-	95	66.234	Esox_lucius
ENSGACG00000015224	rbm38	98	66.960	ENSELUG00000000585	-	100	66.960	Esox_lucius
ENSGACG00000015224	rbm38	98	60.092	ENSFCAG00000042916	RBM38	80	84.694	Felis_catus
ENSGACG00000015224	rbm38	83	70.690	ENSFALG00000010805	RBM38	90	70.690	Ficedula_albicollis
ENSGACG00000015224	rbm38	100	68.396	ENSFHEG00000006160	-	94	68.396	Fundulus_heteroclitus
ENSGACG00000015224	rbm38	100	74.359	ENSFHEG00000017748	rbm38	93	74.359	Fundulus_heteroclitus
ENSGACG00000015224	rbm38	87	71.196	ENSGMOG00000016655	-	98	76.087	Gadus_morhua
ENSGACG00000015224	rbm38	87	68.306	ENSGALG00000026081	RBM38	100	63.594	Gallus_gallus
ENSGACG00000015224	rbm38	100	61.290	ENSGAGG00000001187	RBM38	100	61.290	Gopherus_agassizii
ENSGACG00000015224	rbm38	100	82.110	ENSHBUG00000012058	rbm38	92	82.110	Haplochromis_burtoni
ENSGACG00000015224	rbm38	100	69.863	ENSHBUG00000011778	-	94	69.863	Haplochromis_burtoni
ENSGACG00000015224	rbm38	98	64.319	ENSHGLG00000015077	RBM38	89	64.151	Heterocephalus_glaber_female
ENSGACG00000015224	rbm38	87	74.317	ENSHCOG00000005622	-	52	75.410	Hippocampus_comes
ENSGACG00000015224	rbm38	84	67.241	ENSHCOG00000019040	rbm38	69	67.241	Hippocampus_comes
ENSGACG00000015224	rbm38	97	67.500	ENSIPUG00000019349	-	83	67.500	Ictalurus_punctatus
ENSGACG00000015224	rbm38	98	66.228	ENSKMAG00000012402	rbm38	99	67.105	Kryptolebias_marmoratus
ENSGACG00000015224	rbm38	100	80.687	ENSLBEG00000018878	rbm38	93	80.687	Labrus_bergylta
ENSGACG00000015224	rbm38	100	71.233	ENSLBEG00000016163	RBM38	94	71.233	Labrus_bergylta
ENSGACG00000015224	rbm38	100	68.182	ENSLOCG00000003456	rbm38	94	68.182	Lepisosteus_oculatus
ENSGACG00000015224	rbm38	98	63.333	ENSMFAG00000043808	RBM38	80	85.714	Macaca_fascicularis
ENSGACG00000015224	rbm38	98	63.333	ENSMMUG00000031391	RBM38	80	85.714	Macaca_mulatta
ENSGACG00000015224	rbm38	98	63.333	ENSMNEG00000034683	RBM38	80	85.714	Macaca_nemestrina
ENSGACG00000015224	rbm38	54	67.568	ENSMLEG00000043261	-	90	67.568	Mandrillus_leucophaeus
ENSGACG00000015224	rbm38	100	81.116	ENSMAMG00000024135	rbm38	93	81.116	Mastacembelus_armatus
ENSGACG00000015224	rbm38	100	67.965	ENSMAMG00000020499	RBM38	95	67.965	Mastacembelus_armatus
ENSGACG00000015224	rbm38	100	69.863	ENSMZEG00005000849	-	94	69.863	Maylandia_zebra
ENSGACG00000015224	rbm38	100	79.399	ENSMZEG00005026036	rbm38	93	79.399	Maylandia_zebra
ENSGACG00000015224	rbm38	98	62.736	ENSMAUG00000021211	Rbm38	89	63.679	Mesocricetus_auratus
ENSGACG00000015224	rbm38	98	63.208	ENSMICG00000038011	RBM38	98	63.208	Microcebus_murinus
ENSGACG00000015224	rbm38	98	62.736	ENSMOCG00000008715	Rbm38	89	63.679	Microtus_ochrogaster
ENSGACG00000015224	rbm38	100	71.698	ENSMMOG00000020051	-	93	71.698	Mola_mola
ENSGACG00000015224	rbm38	100	62.673	ENSMODG00000016458	RBM38	92	62.673	Monodelphis_domestica
ENSGACG00000015224	rbm38	87	77.049	ENSMALG00000004680	RBM38	69	77.049	Monopterus_albus
ENSGACG00000015224	rbm38	100	73.611	ENSMALG00000022327	rbm38	93	72.973	Monopterus_albus
ENSGACG00000015224	rbm38	98	62.911	MGP_CAROLIEiJ_G0024745	Rbm38	89	62.736	Mus_caroli
ENSGACG00000015224	rbm38	98	62.911	ENSMUSG00000027510	Rbm38	89	62.736	Mus_musculus
ENSGACG00000015224	rbm38	98	63.380	MGP_PahariEiJ_G0026186	Rbm38	89	62.736	Mus_pahari
ENSGACG00000015224	rbm38	98	63.380	MGP_SPRETEiJ_G0025665	Rbm38	89	62.736	Mus_spretus
ENSGACG00000015224	rbm38	85	66.667	ENSMPUG00000006518	RBM38	96	64.767	Mustela_putorius_furo
ENSGACG00000015224	rbm38	98	62.264	ENSMLUG00000011140	RBM38	98	62.264	Myotis_lucifugus
ENSGACG00000015224	rbm38	100	83.105	ENSNBRG00000022685	rbm38	91	83.105	Neolamprologus_brichardi
ENSGACG00000015224	rbm38	100	65.948	ENSNBRG00000022545	-	95	65.948	Neolamprologus_brichardi
ENSGACG00000015224	rbm38	57	72.414	ENSMEUG00000005475	-	86	72.414	Notamacropus_eugenii
ENSGACG00000015224	rbm38	98	63.679	ENSODEG00000007980	RBM38	89	63.679	Octodon_degus
ENSGACG00000015224	rbm38	99	79.741	ENSONIG00000017073	rbm38	95	79.741	Oreochromis_niloticus
ENSGACG00000015224	rbm38	99	65.801	ENSONIG00000020324	-	95	65.801	Oreochromis_niloticus
ENSGACG00000015224	rbm38	97	62.500	ENSOANG00000009259	RBM38	81	62.500	Ornithorhynchus_anatinus
ENSGACG00000015224	rbm38	100	63.248	ENSORLG00000027180	-	95	63.675	Oryzias_latipes
ENSGACG00000015224	rbm38	100	71.795	ENSORLG00000012154	rbm38	93	71.795	Oryzias_latipes
ENSGACG00000015224	rbm38	100	72.222	ENSORLG00020017871	rbm38	93	72.222	Oryzias_latipes_hni
ENSGACG00000015224	rbm38	100	63.248	ENSORLG00020020751	-	95	63.675	Oryzias_latipes_hni
ENSGACG00000015224	rbm38	100	63.519	ENSORLG00015017040	-	95	63.948	Oryzias_latipes_hsok
ENSGACG00000015224	rbm38	100	72.222	ENSORLG00015012606	rbm38	93	72.222	Oryzias_latipes_hsok
ENSGACG00000015224	rbm38	100	63.793	ENSOMEG00000023912	-	95	64.224	Oryzias_melastigma
ENSGACG00000015224	rbm38	100	70.940	ENSOMEG00000006805	rbm38	93	70.940	Oryzias_melastigma
ENSGACG00000015224	rbm38	98	63.208	ENSOGAG00000029136	RBM38	88	63.208	Otolemur_garnettii
ENSGACG00000015224	rbm38	98	60.092	ENSPPRG00000009507	RBM38	80	84.694	Panthera_pardus
ENSGACG00000015224	rbm38	85	67.222	ENSPTRG00000013661	RBM38	80	85.714	Pan_troglodytes
ENSGACG00000015224	rbm38	74	68.627	ENSPTRG00000045845	-	82	68.627	Pan_troglodytes
ENSGACG00000015224	rbm38	98	63.333	ENSPANG00000020919	-	80	85.714	Papio_anubis
ENSGACG00000015224	rbm38	99	50.000	ENSPANG00000033127	-	92	50.000	Papio_anubis
ENSGACG00000015224	rbm38	87	71.892	ENSPKIG00000025417	rbm38	76	71.892	Paramormyrops_kingsleyae
ENSGACG00000015224	rbm38	99	65.000	ENSPKIG00000018122	-	100	80.342	Paramormyrops_kingsleyae
ENSGACG00000015224	rbm38	100	60.829	ENSPSIG00000011649	RBM38	92	60.829	Pelodiscus_sinensis
ENSGACG00000015224	rbm38	100	63.248	ENSPMGG00000017094	-	95	63.248	Periophthalmus_magnuspinnatus
ENSGACG00000015224	rbm38	100	67.811	ENSPMGG00000011343	rbm38	94	71.245	Periophthalmus_magnuspinnatus
ENSGACG00000015224	rbm38	100	62.673	ENSPCIG00000013648	RBM38	92	62.673	Phascolarctos_cinereus
ENSGACG00000015224	rbm38	100	74.262	ENSPFOG00000011658	rbm38	93	74.262	Poecilia_formosa
ENSGACG00000015224	rbm38	100	63.675	ENSPLAG00000002500	-	95	63.675	Poecilia_latipinna
ENSGACG00000015224	rbm38	100	73.840	ENSPLAG00000005218	rbm38	93	73.840	Poecilia_latipinna
ENSGACG00000015224	rbm38	100	74.262	ENSPMEG00000015770	rbm38	93	74.262	Poecilia_mexicana
ENSGACG00000015224	rbm38	100	73.840	ENSPREG00000007398	rbm38	93	73.840	Poecilia_reticulata
ENSGACG00000015224	rbm38	98	63.208	ENSPCOG00000026201	RBM38	80	84.848	Propithecus_coquereli
ENSGACG00000015224	rbm38	54	88.462	ENSPVAG00000006457	RBM38	62	88.462	Pteropus_vampyrus
ENSGACG00000015224	rbm38	100	69.863	ENSPNYG00000019727	-	100	83.761	Pundamilia_nyererei
ENSGACG00000015224	rbm38	100	81.019	ENSPNYG00000021373	rbm38	92	82.870	Pundamilia_nyererei
ENSGACG00000015224	rbm38	87	74.586	ENSPNAG00000015123	-	92	80.672	Pygocentrus_nattereri
ENSGACG00000015224	rbm38	86	72.881	ENSPNAG00000010596	rbm38	76	72.881	Pygocentrus_nattereri
ENSGACG00000015224	rbm38	98	62.736	ENSRNOG00000006420	Rbm38	89	62.736	Rattus_norvegicus
ENSGACG00000015224	rbm38	98	54.106	ENSRROG00000036388	-	88	54.106	Rhinopithecus_roxellana
ENSGACG00000015224	rbm38	98	62.736	ENSSBOG00000031053	RBM38	92	84.848	Saimiri_boliviensis_boliviensis
ENSGACG00000015224	rbm38	100	61.947	ENSSFOG00015004453	rbm38	94	64.602	Scleropages_formosus
ENSGACG00000015224	rbm38	100	83.262	ENSSDUG00000022611	rbm38	93	83.262	Seriola_dumerili
ENSGACG00000015224	rbm38	100	66.379	ENSSDUG00000021082	RBM38	95	66.379	Seriola_dumerili
ENSGACG00000015224	rbm38	100	87.678	ENSSLDG00000010845	rbm38	92	87.678	Seriola_lalandi_dorsalis
ENSGACG00000015224	rbm38	100	67.241	ENSSLDG00000011778	RBM38	95	67.241	Seriola_lalandi_dorsalis
ENSGACG00000015224	rbm38	100	81.974	ENSSPAG00000011113	rbm38	93	81.974	Stegastes_partitus
ENSGACG00000015224	rbm38	100	70.813	ENSSPAG00000020989	RBM38	94	72.381	Stegastes_partitus
ENSGACG00000015224	rbm38	98	62.736	ENSSSCG00000007504	RBM38	89	62.736	Sus_scrofa
ENSGACG00000015224	rbm38	100	77.293	ENSTRUG00000024954	rbm38	93	77.293	Takifugu_rubripes
ENSGACG00000015224	rbm38	100	64.807	ENSTRUG00000019869	-	95	64.807	Takifugu_rubripes
ENSGACG00000015224	rbm38	100	68.919	ENSTNIG00000007093	-	100	68.919	Tetraodon_nigroviridis
ENSGACG00000015224	rbm38	98	60.550	ENSUAMG00000019780	RBM38	89	62.736	Ursus_americanus
ENSGACG00000015224	rbm38	98	63.679	ENSVVUG00000017246	RBM38	89	63.679	Vulpes_vulpes
ENSGACG00000015224	rbm38	87	68.852	ENSXETG00000011268	rbm38	99	61.538	Xenopus_tropicalis
ENSGACG00000015224	rbm38	77	65.644	ENSXCOG00000017324	-	67	65.644	Xiphophorus_couchianus
ENSGACG00000015224	rbm38	100	75.536	ENSXMAG00000023662	rbm38	93	75.536	Xiphophorus_maculatus