EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000015258 (Gene tree)
Gene ID: -
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 9418 bases
Position: chrscaffold_48:722811-732228
Accession: ZDB-GENE-050327-81
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000020125	KH_1	PF00013.29	3.3e-15	1	1
ENSGACP00000020125	TUDOR	PF00567.24	4.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000020164	-	2200	-	ENSGACP00000020125	572 (aa)	-	G3PR90

Gene Model

Click here to download ENSGACG00000015258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000015258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000015258	tdrkh	100	74.242	ENSAPOG00000012653	tdrkh	99	75.758	Acanthochromis_polyacanthus
ENSGACG00000015258	tdrkh	91	70.632	ENSACIG00000010318	tdrkh	98	70.632	Amphilophus_citrinellus
ENSGACG00000015258	tdrkh	97	75.045	ENSAOCG00000020623	tdrkh	100	74.377	Amphiprion_ocellaris
ENSGACG00000015258	tdrkh	94	73.488	ENSAPEG00000018388	tdrkh	100	74.555	Amphiprion_percula
ENSGACG00000015258	tdrkh	100	74.112	ENSATEG00000023809	tdrkh	100	74.112	Anabas_testudineus
ENSGACG00000015258	tdrkh	94	69.534	ENSACLG00000003017	tdrkh	100	69.713	Astatotilapia_calliptera
ENSGACG00000015258	tdrkh	99	62.261	ENSAMXG00000011664	tdrkh	99	62.045	Astyanax_mexicanus
ENSGACG00000015258	tdrkh	95	65.432	ENSCSEG00000002894	tdrkh	100	66.607	Cynoglossus_semilaevis
ENSGACG00000015258	tdrkh	58	77.114	ENSCVAG00000020347	tdrkh	78	77.114	Cyprinodon_variegatus
ENSGACG00000015258	tdrkh	99	61.034	ENSDARG00000053474	tdrkh	99	61.034	Danio_rerio
ENSGACG00000015258	tdrkh	100	63.495	ENSELUG00000024537	tdrkh	100	63.495	Esox_lucius
ENSGACG00000015258	tdrkh	94	69.675	ENSFHEG00000003544	tdrkh	100	69.675	Fundulus_heteroclitus
ENSGACG00000015258	tdrkh	100	65.972	ENSGMOG00000009304	tdrkh	100	65.972	Gadus_morhua
ENSGACG00000015258	tdrkh	94	67.568	ENSGAFG00000010754	tdrkh	100	67.568	Gambusia_affinis
ENSGACG00000015258	tdrkh	94	69.713	ENSHBUG00000017609	tdrkh	100	69.713	Haplochromis_burtoni
ENSGACG00000015258	tdrkh	94	60.507	ENSIPUG00000009673	tdrkh	99	60.507	Ictalurus_punctatus
ENSGACG00000015258	tdrkh	95	68.728	ENSKMAG00000016638	tdrkh	94	68.905	Kryptolebias_marmoratus
ENSGACG00000015258	tdrkh	96	72.456	ENSLBEG00000027323	tdrkh	99	72.456	Labrus_bergylta
ENSGACG00000015258	tdrkh	99	50.683	ENSLOCG00000011381	tdrkh	99	51.075	Lepisosteus_oculatus
ENSGACG00000015258	tdrkh	94	72.093	ENSMAMG00000020343	tdrkh	100	72.093	Mastacembelus_armatus
ENSGACG00000015258	tdrkh	94	69.534	ENSMZEG00005006755	tdrkh	100	69.713	Maylandia_zebra
ENSGACG00000015258	tdrkh	97	70.383	ENSMMOG00000020663	tdrkh	95	70.035	Mola_mola
ENSGACG00000015258	tdrkh	94	71.480	ENSMALG00000015401	tdrkh	100	71.480	Monopterus_albus
ENSGACG00000015258	tdrkh	94	67.204	ENSNBRG00000023815	tdrkh	100	67.204	Neolamprologus_brichardi
ENSGACG00000015258	tdrkh	94	70.182	ENSORLG00000029204	tdrkh	99	70.182	Oryzias_latipes
ENSGACG00000015258	tdrkh	90	68.311	ENSORLG00020016168	tdrkh	99	68.311	Oryzias_latipes_hni
ENSGACG00000015258	tdrkh	94	66.667	ENSORLG00015014094	tdrkh	99	66.667	Oryzias_latipes_hsok
ENSGACG00000015258	tdrkh	97	69.558	ENSOMEG00000015063	tdrkh	94	69.558	Oryzias_melastigma
ENSGACG00000015258	tdrkh	98	53.584	ENSPKIG00000017597	tdrkh	100	58.018	Paramormyrops_kingsleyae
ENSGACG00000015258	tdrkh	94	66.727	ENSPMGG00000019362	tdrkh	100	66.906	Periophthalmus_magnuspinnatus
ENSGACG00000015258	tdrkh	100	67.517	ENSPFOG00000013032	tdrkh	100	66.951	Poecilia_formosa
ENSGACG00000015258	tdrkh	94	68.165	ENSPLAG00000004193	tdrkh	100	67.568	Poecilia_latipinna
ENSGACG00000015258	tdrkh	94	67.986	ENSPMEG00000016502	tdrkh	100	67.387	Poecilia_mexicana
ENSGACG00000015258	tdrkh	100	65.758	ENSPREG00000004213	tdrkh	100	65.758	Poecilia_reticulata
ENSGACG00000015258	tdrkh	91	68.889	ENSPNYG00000022818	tdrkh	97	69.074	Pundamilia_nyererei
ENSGACG00000015258	tdrkh	99	60.137	ENSPNAG00000008783	tdrkh	99	60.137	Pygocentrus_nattereri
ENSGACG00000015258	tdrkh	94	57.942	ENSSFOG00015001048	tdrkh	100	58.303	Scleropages_formosus
ENSGACG00000015258	tdrkh	97	74.327	ENSSMAG00000001532	tdrkh	100	74.286	Scophthalmus_maximus
ENSGACG00000015258	tdrkh	94	73.592	ENSSDUG00000013393	tdrkh	100	73.592	Seriola_dumerili
ENSGACG00000015258	tdrkh	100	74.043	ENSSLDG00000017418	tdrkh	100	73.239	Seriola_lalandi_dorsalis
ENSGACG00000015258	tdrkh	100	75.253	ENSSPAG00000006435	tdrkh	100	76.263	Stegastes_partitus
ENSGACG00000015258	tdrkh	91	68.715	ENSTRUG00000006644	tdrkh	97	68.715	Takifugu_rubripes
ENSGACG00000015258	tdrkh	94	65.000	ENSTNIG00000003157	tdrkh	99	63.958	Tetraodon_nigroviridis
ENSGACG00000015258	tdrkh	87	73.973	ENSXCOG00000016972	tdrkh	99	73.973	Xiphophorus_couchianus
ENSGACG00000015258	tdrkh	94	66.187	ENSXMAG00000014756	tdrkh	100	66.187	Xiphophorus_maculatus