EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000015334 (Gene tree)
Gene ID: -
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1 ribosome biogenesis factor
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 10766 bases
Position: chrscaffold_48:1209476-1220241
Accession: ZDB-GENE-060720-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000020230	AARP2CN	PF08142.12	5.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000020269	-	3965	-	ENSGACP00000020230	1281 (aa)	-	G3PRJ4

Gene Model

Click here to download ENSGACG00000015334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000015334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000015334	bms1	88	66.290	ENSG00000165733	BMS1	99	59.784	Homo_sapiens
ENSGACG00000015334	bms1	79	83.866	ENSAPOG00000002296	bms1	100	84.185	Acanthochromis_polyacanthus
ENSGACG00000015334	bms1	89	66.080	ENSAMEG00000016834	BMS1	99	59.373	Ailuropoda_melanoleuca
ENSGACG00000015334	bms1	100	72.162	ENSACIG00000002588	bms1	99	80.635	Amphilophus_citrinellus
ENSGACG00000015334	bms1	89	83.758	ENSAOCG00000018088	bms1	99	84.076	Amphiprion_ocellaris
ENSGACG00000015334	bms1	89	83.706	ENSAPEG00000014673	bms1	100	84.026	Amphiprion_percula
ENSGACG00000015334	bms1	89	83.121	ENSATEG00000023465	bms1	100	83.599	Anabas_testudineus
ENSGACG00000015334	bms1	89	68.293	ENSAPLG00000003759	BMS1	99	60.526	Anas_platyrhynchos
ENSGACG00000015334	bms1	88	65.920	ENSACAG00000004537	-	99	57.788	Anolis_carolinensis
ENSGACG00000015334	bms1	89	65.329	ENSANAG00000023432	BMS1	99	59.923	Aotus_nancymaae
ENSGACG00000015334	bms1	89	80.128	ENSACLG00000001294	bms1	99	80.128	Astatotilapia_calliptera
ENSGACG00000015334	bms1	88	76.115	ENSAMXG00000011236	bms1	92	76.471	Astyanax_mexicanus
ENSGACG00000015334	bms1	99	60.321	ENSBTAG00000012878	BMS1	99	59.653	Bos_taurus
ENSGACG00000015334	bms1	79	51.358	WBGene00022021	Y61A9LA.10	96	50.118	Caenorhabditis_elegans
ENSGACG00000015334	bms1	88	66.129	ENSCJAG00000021705	BMS1	99	60.262	Callithrix_jacchus
ENSGACG00000015334	bms1	89	65.966	ENSCAFG00000007114	BMS1	99	58.465	Canis_familiaris
ENSGACG00000015334	bms1	89	65.966	ENSCAFG00020025282	BMS1	99	58.465	Canis_lupus_dingo
ENSGACG00000015334	bms1	99	59.304	ENSCHIG00000023251	BMS1	99	59.276	Capra_hircus
ENSGACG00000015334	bms1	99	56.802	ENSCAPG00000008652	BMS1	99	57.088	Cavia_aperea
ENSGACG00000015334	bms1	99	60.108	ENSCPOG00000000502	BMS1	99	60.169	Cavia_porcellus
ENSGACG00000015334	bms1	88	57.143	ENSCCAG00000024969	-	99	50.310	Cebus_capucinus
ENSGACG00000015334	bms1	69	54.741	ENSCATG00000008695	-	73	55.603	Cercocebus_atys
ENSGACG00000015334	bms1	88	65.806	ENSCATG00000030625	-	99	59.784	Cercocebus_atys
ENSGACG00000015334	bms1	89	65.209	ENSCLAG00000002446	BMS1	89	65.293	Chinchilla_lanigera
ENSGACG00000015334	bms1	88	65.645	ENSCSAG00000011118	BMS1	99	59.892	Chlorocebus_sabaeus
ENSGACG00000015334	bms1	99	59.157	ENSCHOG00000011055	BMS1	99	59.325	Choloepus_hoffmanni
ENSGACG00000015334	bms1	90	66.351	ENSCPBG00000025581	BMS1	87	66.193	Chrysemys_picta_bellii
ENSGACG00000015334	bms1	79	58.273	ENSCING00000003181	-	96	58.753	Ciona_intestinalis
ENSGACG00000015334	bms1	75	52.804	ENSCSAVG00000004113	-	89	53.653	Ciona_savignyi
ENSGACG00000015334	bms1	88	66.290	ENSCANG00000011609	BMS1	99	60.015	Colobus_angolensis_palliatus
ENSGACG00000015334	bms1	88	65.605	ENSCGRG00001019461	Bms1	91	64.218	Cricetulus_griseus_chok1gshd
ENSGACG00000015334	bms1	88	65.605	ENSCGRG00000009016	Bms1	91	64.218	Cricetulus_griseus_crigri
ENSGACG00000015334	bms1	90	80.288	ENSCSEG00000002469	bms1	97	80.288	Cynoglossus_semilaevis
ENSGACG00000015334	bms1	89	81.731	ENSCVAG00000008371	bms1	97	82.212	Cyprinodon_variegatus
ENSGACG00000015334	bms1	88	74.051	ENSDARG00000054154	bms1	93	75.000	Danio_rerio
ENSGACG00000015334	bms1	89	65.815	ENSDNOG00000015761	BMS1	99	58.327	Dasypus_novemcinctus
ENSGACG00000015334	bms1	99	59.737	ENSDORG00000002982	Bms1	99	60.046	Dipodomys_ordii
ENSGACG00000015334	bms1	78	59.951	FBgn0036686	CG7728	94	56.404	Drosophila_melanogaster
ENSGACG00000015334	bms1	74	63.393	ENSETEG00000009554	BMS1	91	63.393	Echinops_telfairi
ENSGACG00000015334	bms1	89	66.346	ENSEASG00005006894	BMS1	99	59.847	Equus_asinus_asinus
ENSGACG00000015334	bms1	89	66.186	ENSECAG00000001358	BMS1	99	59.618	Equus_caballus
ENSGACG00000015334	bms1	89	75.000	ENSELUG00000001756	bms1	98	75.633	Esox_lucius
ENSGACG00000015334	bms1	89	66.132	ENSFCAG00000011220	BMS1	99	59.784	Felis_catus
ENSGACG00000015334	bms1	93	66.190	ENSFALG00000006882	BMS1	99	60.121	Ficedula_albicollis
ENSGACG00000015334	bms1	99	58.352	ENSFDAG00000001422	BMS1	89	65.974	Fukomys_damarensis
ENSGACG00000015334	bms1	89	80.990	ENSFHEG00000003367	bms1	97	82.097	Fundulus_heteroclitus
ENSGACG00000015334	bms1	89	75.962	ENSGMOG00000000718	bms1	98	75.962	Gadus_morhua
ENSGACG00000015334	bms1	89	67.305	ENSGALG00000002624	BMS1	88	67.197	Gallus_gallus
ENSGACG00000015334	bms1	91	67.147	ENSGAGG00000003467	BMS1	99	60.324	Gopherus_agassizii
ENSGACG00000015334	bms1	89	80.128	ENSHBUG00000022628	bms1	99	80.128	Haplochromis_burtoni
ENSGACG00000015334	bms1	92	65.176	ENSHGLG00000000477	BMS1	89	65.974	Heterocephalus_glaber_female
ENSGACG00000015334	bms1	92	65.176	ENSHGLG00100002176	BMS1	89	65.974	Heterocephalus_glaber_male
ENSGACG00000015334	bms1	89	79.903	ENSHCOG00000017604	bms1	99	79.903	Hippocampus_comes
ENSGACG00000015334	bms1	88	77.229	ENSIPUG00000017855	bms1	100	67.070	Ictalurus_punctatus
ENSGACG00000015334	bms1	89	65.920	ENSSTOG00000015063	BMS1	99	59.547	Ictidomys_tridecemlineatus
ENSGACG00000015334	bms1	89	66.132	ENSJJAG00000017328	Bms1	99	60.170	Jaculus_jaculus
ENSGACG00000015334	bms1	56	76.155	ENSKMAG00000021982	bms1	95	75.046	Kryptolebias_marmoratus
ENSGACG00000015334	bms1	89	80.159	ENSLBEG00000028208	bms1	100	81.775	Labrus_bergylta
ENSGACG00000015334	bms1	89	63.327	ENSLACG00000001600	BMS1	91	63.327	Latimeria_chalumnae
ENSGACG00000015334	bms1	82	79.384	ENSLOCG00000012914	bms1	94	75.196	Lepisosteus_oculatus
ENSGACG00000015334	bms1	91	65.064	ENSLAFG00000006250	BMS1	89	65.385	Loxodonta_africana
ENSGACG00000015334	bms1	82	65.201	ENSMFAG00000037771	BMS1	99	63.842	Macaca_fascicularis
ENSGACG00000015334	bms1	79	59.608	ENSMMUG00000007426	-	99	51.959	Macaca_mulatta
ENSGACG00000015334	bms1	70	54.726	ENSMLEG00000029084	-	80	55.473	Mandrillus_leucophaeus
ENSGACG00000015334	bms1	89	82.853	ENSMAMG00000020855	bms1	99	82.853	Mastacembelus_armatus
ENSGACG00000015334	bms1	89	80.128	ENSMZEG00005005663	bms1	99	80.128	Maylandia_zebra
ENSGACG00000015334	bms1	85	67.038	ENSMGAG00000001170	BMS1	88	67.197	Meleagris_gallopavo
ENSGACG00000015334	bms1	88	65.710	ENSMAUG00000002195	Bms1	91	64.218	Mesocricetus_auratus
ENSGACG00000015334	bms1	89	66.132	ENSMICG00000009977	BMS1	99	59.143	Microcebus_murinus
ENSGACG00000015334	bms1	88	66.186	ENSMOCG00000002038	Bms1	90	64.431	Microtus_ochrogaster
ENSGACG00000015334	bms1	90	81.600	ENSMMOG00000000977	bms1	98	81.600	Mola_mola
ENSGACG00000015334	bms1	89	64.976	ENSMODG00000001177	BMS1	99	59.490	Monodelphis_domestica
ENSGACG00000015334	bms1	93	81.094	ENSMALG00000009680	bms1	98	81.562	Monopterus_albus
ENSGACG00000015334	bms1	65	73.580	MGP_CAROLIEiJ_G0028785	-	78	77.872	Mus_caroli
ENSGACG00000015334	bms1	99	59.225	ENSMUSG00000030138	Bms1	99	59.059	Mus_musculus
ENSGACG00000015334	bms1	89	65.294	MGP_PahariEiJ_G0022539	Bms1	89	65.397	Mus_pahari
ENSGACG00000015334	bms1	99	59.302	MGP_SPRETEiJ_G0029816	Bms1	99	58.737	Mus_spretus
ENSGACG00000015334	bms1	89	66.720	ENSMPUG00000017276	BMS1	99	59.693	Mustela_putorius_furo
ENSGACG00000015334	bms1	99	59.509	ENSMLUG00000003260	BMS1	99	59.708	Myotis_lucifugus
ENSGACG00000015334	bms1	84	66.236	ENSNGAG00000015258	Bms1	84	66.236	Nannospalax_galili
ENSGACG00000015334	bms1	88	65.201	ENSNLEG00000015791	BMS1	99	59.045	Nomascus_leucogenys
ENSGACG00000015334	bms1	80	72.662	ENSOPRG00000005195	BMS1	80	72.662	Ochotona_princeps
ENSGACG00000015334	bms1	88	64.875	ENSODEG00000005554	BMS1	89	65.434	Octodon_degus
ENSGACG00000015334	bms1	89	80.257	ENSONIG00000007227	bms1	99	80.257	Oreochromis_niloticus
ENSGACG00000015334	bms1	89	65.506	ENSOANG00000000662	-	89	65.665	Ornithorhynchus_anatinus
ENSGACG00000015334	bms1	89	65.446	ENSOCUG00000005354	BMS1	99	59.784	Oryctolagus_cuniculus
ENSGACG00000015334	bms1	89	82.229	ENSORLG00000014655	bms1	97	82.229	Oryzias_latipes
ENSGACG00000015334	bms1	90	81.410	ENSORLG00020016246	bms1	99	71.839	Oryzias_latipes_hni
ENSGACG00000015334	bms1	91	80.346	ENSORLG00015014183	bms1	96	80.346	Oryzias_latipes_hsok
ENSGACG00000015334	bms1	89	83.360	ENSOMEG00000015042	bms1	96	83.360	Oryzias_melastigma
ENSGACG00000015334	bms1	88	65.640	ENSOGAG00000006511	BMS1	99	59.287	Otolemur_garnettii
ENSGACG00000015334	bms1	99	59.201	ENSOARG00000003900	BMS1	99	59.323	Ovis_aries
ENSGACG00000015334	bms1	88	64.559	ENSPPAG00000027837	BMS1	99	56.659	Pan_paniscus
ENSGACG00000015334	bms1	89	66.132	ENSPPRG00000001311	BMS1	99	58.660	Panthera_pardus
ENSGACG00000015334	bms1	89	65.067	ENSPTIG00000009652	BMS1	99	57.713	Panthera_tigris_altaica
ENSGACG00000015334	bms1	88	66.613	ENSPTRG00000002441	BMS1	99	59.784	Pan_troglodytes
ENSGACG00000015334	bms1	90	72.266	ENSPKIG00000008165	bms1	91	74.326	Paramormyrops_kingsleyae
ENSGACG00000015334	bms1	88	65.873	ENSPSIG00000006481	BMS1	91	66.667	Pelodiscus_sinensis
ENSGACG00000015334	bms1	89	65.243	ENSPEMG00000022467	Bms1	90	64.516	Peromyscus_maniculatus_bairdii
ENSGACG00000015334	bms1	83	71.558	ENSPCIG00000001339	BMS1	99	71.229	Phascolarctos_cinereus
ENSGACG00000015334	bms1	89	80.707	ENSPFOG00000015180	bms1	96	82.201	Poecilia_formosa
ENSGACG00000015334	bms1	89	82.334	ENSPMEG00000023176	bms1	91	82.334	Poecilia_mexicana
ENSGACG00000015334	bms1	89	81.745	ENSPREG00000002695	bms1	96	82.068	Poecilia_reticulata
ENSGACG00000015334	bms1	68	71.333	ENSPCAG00000014528	BMS1	70	69.955	Procavia_capensis
ENSGACG00000015334	bms1	84	62.578	ENSPCOG00000023834	-	94	62.179	Propithecus_coquereli
ENSGACG00000015334	bms1	89	65.378	ENSPVAG00000000725	BMS1	99	58.864	Pteropus_vampyrus
ENSGACG00000015334	bms1	90	79.715	ENSPNYG00000018866	bms1	98	79.715	Pundamilia_nyererei
ENSGACG00000015334	bms1	89	77.901	ENSPNAG00000000676	bms1	99	68.098	Pygocentrus_nattereri
ENSGACG00000015334	bms1	70	67.436	ENSRNOG00000006576	Bms1	88	64.951	Rattus_norvegicus
ENSGACG00000015334	bms1	88	65.968	ENSRROG00000040101	BMS1	99	58.475	Rhinopithecus_roxellana
ENSGACG00000015334	bms1	75	43.984	YPL217C	-	92	45.339	Saccharomyces_cerevisiae
ENSGACG00000015334	bms1	91	66.129	ENSSBOG00000035778	BMS1	99	60.092	Saimiri_boliviensis_boliviensis
ENSGACG00000015334	bms1	89	64.904	ENSSHAG00000005062	BMS1	99	59.893	Sarcophilus_harrisii
ENSGACG00000015334	bms1	90	77.724	ENSSFOG00015022313	bms1	93	77.724	Scleropages_formosus
ENSGACG00000015334	bms1	89	82.137	ENSSMAG00000019966	bms1	99	83.254	Scophthalmus_maximus
ENSGACG00000015334	bms1	89	85.691	ENSSDUG00000016875	bms1	99	86.174	Seriola_dumerili
ENSGACG00000015334	bms1	89	85.233	ENSSLDG00000015199	bms1	99	85.714	Seriola_lalandi_dorsalis
ENSGACG00000015334	bms1	89	66.506	ENSSSCG00000010198	BMS1	99	58.921	Sus_scrofa
ENSGACG00000015334	bms1	89	66.879	ENSTGUG00000006302	-	88	66.879	Taeniopygia_guttata
ENSGACG00000015334	bms1	92	74.716	ENSTRUG00000008028	bms1	99	75.566	Takifugu_rubripes
ENSGACG00000015334	bms1	99	66.795	ENSTNIG00000006216	bms1	99	67.469	Tetraodon_nigroviridis
ENSGACG00000015334	bms1	61	67.347	ENSTBEG00000001673	-	64	67.110	Tupaia_belangeri
ENSGACG00000015334	bms1	89	66.292	ENSTTRG00000007983	BMS1	99	57.943	Tursiops_truncatus
ENSGACG00000015334	bms1	89	66.399	ENSUAMG00000023996	BMS1	99	59.416	Ursus_americanus
ENSGACG00000015334	bms1	89	66.077	ENSUMAG00000016523	BMS1	99	59.262	Ursus_maritimus
ENSGACG00000015334	bms1	71	71.300	ENSVPAG00000007477	BMS1	86	61.067	Vicugna_pacos
ENSGACG00000015334	bms1	89	65.966	ENSVVUG00000021305	BMS1	99	59.737	Vulpes_vulpes
ENSGACG00000015334	bms1	86	67.333	ENSXETG00000008158	bms1	90	67.357	Xenopus_tropicalis
ENSGACG00000015334	bms1	89	81.260	ENSXCOG00000000506	bms1	96	85.749	Xiphophorus_couchianus
ENSGACG00000015334	bms1	88	81.906	ENSXMAG00000014236	bms1	97	82.229	Xiphophorus_maculatus