EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000015428 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3172 bases
Position: chrgroupII:8332065-8335236
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000020351	RRM_1	PF00076.22	2.1e-15	1	1
ENSGACP00000020349	RRM_1	PF00076.22	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000020388	PABPN1L-201	1313	-	ENSGACP00000020349	269 (aa)	-	G3PRW3
ENSGACT00000020390	PABPN1L-202	1290	-	ENSGACP00000020351	267 (aa)	-	G3PRW5

Gene Model

Click here to download ENSGACG00000015428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000015428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000015428	PABPN1L	71	54.315	ENSGACG00000002167	pabpn1	59	61.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000015428	PABPN1L	72	50.732	ENSG00000205022	PABPN1L	58	51.497	Homo_sapiens
ENSGACG00000015428	PABPN1L	91	86.475	ENSAPOG00000000685	PABPN1L	78	85.246	Acanthochromis_polyacanthus
ENSGACG00000015428	PABPN1L	91	81.070	ENSACIG00000021400	PABPN1L	98	81.893	Amphilophus_citrinellus
ENSGACG00000015428	PABPN1L	100	87.640	ENSAOCG00000019844	PABPN1L	100	87.640	Amphiprion_ocellaris
ENSGACG00000015428	PABPN1L	100	87.266	ENSAPEG00000019534	PABPN1L	100	87.266	Amphiprion_percula
ENSGACG00000015428	PABPN1L	93	83.871	ENSATEG00000011646	PABPN1L	95	86.008	Anabas_testudineus
ENSGACG00000015428	PABPN1L	66	56.983	ENSACAG00000013250	PABPN1L	74	60.403	Anolis_carolinensis
ENSGACG00000015428	PABPN1L	72	52.451	ENSANAG00000038178	PABPN1L	61	53.179	Aotus_nancymaae
ENSGACG00000015428	PABPN1L	100	85.393	ENSACLG00000025147	PABPN1L	100	85.393	Astatotilapia_calliptera
ENSGACG00000015428	PABPN1L	56	69.799	ENSAMXG00000010873	PABPN1L	55	68.456	Astyanax_mexicanus
ENSGACG00000015428	PABPN1L	72	52.709	ENSCJAG00000045284	PABPN1L	55	56.688	Callithrix_jacchus
ENSGACG00000015428	PABPN1L	67	47.568	ENSCAPG00000007240	PABPN1L	64	47.486	Cavia_aperea
ENSGACG00000015428	PABPN1L	59	50.311	ENSCPOG00000025951	PABPN1L	55	50.323	Cavia_porcellus
ENSGACG00000015428	PABPN1L	72	53.922	ENSCCAG00000027631	PABPN1L	58	55.758	Cebus_capucinus
ENSGACG00000015428	PABPN1L	72	51.220	ENSCATG00000031060	PABPN1L	59	52.096	Cercocebus_atys
ENSGACG00000015428	PABPN1L	66	46.154	ENSCLAG00000000704	PABPN1L	64	45.856	Chinchilla_lanigera
ENSGACG00000015428	PABPN1L	100	78.731	ENSCSEG00000001142	pabpn1l	100	77.122	Cynoglossus_semilaevis
ENSGACG00000015428	PABPN1L	100	83.895	ENSCVAG00000015547	PABPN1L	100	83.895	Cyprinodon_variegatus
ENSGACG00000015428	PABPN1L	69	48.925	ENSDNOG00000034677	PABPN1L	57	50.318	Dasypus_novemcinctus
ENSGACG00000015428	PABPN1L	64	50.282	ENSEASG00005000777	PABPN1L	61	49.080	Equus_asinus_asinus
ENSGACG00000015428	PABPN1L	96	64.729	ENSELUG00000018385	PABPN1L	96	62.357	Esox_lucius
ENSGACG00000015428	PABPN1L	64	52.542	ENSFCAG00000010465	PABPN1L	59	50.877	Felis_catus
ENSGACG00000015428	PABPN1L	60	57.233	ENSFALG00000003319	PABPN1L	59	55.263	Ficedula_albicollis
ENSGACG00000015428	PABPN1L	59	52.761	ENSFDAG00000021067	PABPN1L	60	49.112	Fukomys_damarensis
ENSGACG00000015428	PABPN1L	100	83.895	ENSFHEG00000018295	PABPN1L	100	83.895	Fundulus_heteroclitus
ENSGACG00000015428	PABPN1L	100	72.491	ENSGMOG00000001475	PABPN1L	100	71.004	Gadus_morhua
ENSGACG00000015428	PABPN1L	55	59.333	ENSGALG00000006242	PABPN1L	73	60.000	Gallus_gallus
ENSGACG00000015428	PABPN1L	100	83.521	ENSGAFG00000012565	PABPN1L	100	83.521	Gambusia_affinis
ENSGACG00000015428	PABPN1L	72	49.761	ENSGGOG00000012670	PABPN1L	59	51.497	Gorilla_gorilla
ENSGACG00000015428	PABPN1L	100	85.768	ENSHBUG00000002388	PABPN1L	100	85.768	Haplochromis_burtoni
ENSGACG00000015428	PABPN1L	100	79.044	ENSHCOG00000004151	PABPN1L	99	79.412	Hippocampus_comes
ENSGACG00000015428	PABPN1L	73	47.317	ENSJJAG00000006433	Pabpn1l	58	50.307	Jaculus_jaculus
ENSGACG00000015428	PABPN1L	82	83.105	ENSKMAG00000001112	PABPN1L	96	82.805	Kryptolebias_marmoratus
ENSGACG00000015428	PABPN1L	100	81.784	ENSLBEG00000011647	PABPN1L	97	84.015	Labrus_bergylta
ENSGACG00000015428	PABPN1L	72	51.220	ENSMFAG00000002924	PABPN1L	59	52.096	Macaca_fascicularis
ENSGACG00000015428	PABPN1L	72	51.471	ENSMMUG00000012438	PABPN1L	59	51.807	Macaca_mulatta
ENSGACG00000015428	PABPN1L	72	51.220	ENSMNEG00000044808	PABPN1L	59	52.096	Macaca_nemestrina
ENSGACG00000015428	PABPN1L	72	50.732	ENSMLEG00000032667	PABPN1L	59	51.497	Mandrillus_leucophaeus
ENSGACG00000015428	PABPN1L	100	85.393	ENSMZEG00005002186	PABPN1L	100	85.393	Maylandia_zebra
ENSGACG00000015428	PABPN1L	75	90.500	ENSMMOG00000017714	PABPN1L	87	90.500	Mola_mola
ENSGACG00000015428	PABPN1L	70	51.515	ENSMODG00000003873	-	61	50.562	Monodelphis_domestica
ENSGACG00000015428	PABPN1L	100	82.772	ENSMALG00000016926	PABPN1L	100	82.772	Monopterus_albus
ENSGACG00000015428	PABPN1L	63	52.299	MGP_CAROLIEiJ_G0031670	Pabpn1l	59	51.479	Mus_caroli
ENSGACG00000015428	PABPN1L	66	51.337	MGP_PahariEiJ_G0023268	Pabpn1l	64	50.549	Mus_pahari
ENSGACG00000015428	PABPN1L	70	45.161	ENSNGAG00000023992	Pabpn1l	68	47.120	Nannospalax_galili
ENSGACG00000015428	PABPN1L	91	86.364	ENSNBRG00000017078	PABPN1L	100	86.364	Neolamprologus_brichardi
ENSGACG00000015428	PABPN1L	67	49.490	ENSOPRG00000005597	PABPN1L	61	48.256	Ochotona_princeps
ENSGACG00000015428	PABPN1L	63	50.867	ENSODEG00000004649	PABPN1L	59	49.701	Octodon_degus
ENSGACG00000015428	PABPN1L	61	57.927	ENSOANG00000013901	PABPN1L	54	55.333	Ornithorhynchus_anatinus
ENSGACG00000015428	PABPN1L	100	77.154	ENSORLG00000026560	PABPN1L	100	77.154	Oryzias_latipes
ENSGACG00000015428	PABPN1L	100	76.779	ENSORLG00020015068	PABPN1L	100	76.779	Oryzias_latipes_hni
ENSGACG00000015428	PABPN1L	100	77.154	ENSORLG00015000397	PABPN1L	100	77.154	Oryzias_latipes_hsok
ENSGACG00000015428	PABPN1L	100	75.836	ENSOMEG00000017896	PABPN1L	72	75.836	Oryzias_melastigma
ENSGACG00000015428	PABPN1L	72	51.220	ENSPPAG00000028866	PABPN1L	58	52.096	Pan_paniscus
ENSGACG00000015428	PABPN1L	64	52.542	ENSPPRG00000015106	PABPN1L	59	50.877	Panthera_pardus
ENSGACG00000015428	PABPN1L	68	48.168	ENSPTIG00000015606	PABPN1L	61	47.239	Panthera_tigris_altaica
ENSGACG00000015428	PABPN1L	72	51.220	ENSPTRG00000031120	PABPN1L	58	52.096	Pan_troglodytes
ENSGACG00000015428	PABPN1L	72	49.515	ENSPANG00000026039	PABPN1L	55	52.903	Papio_anubis
ENSGACG00000015428	PABPN1L	62	61.905	ENSPSIG00000003404	PABPN1L	76	59.873	Pelodiscus_sinensis
ENSGACG00000015428	PABPN1L	81	84.186	ENSPMGG00000013927	PABPN1L	96	83.258	Periophthalmus_magnuspinnatus
ENSGACG00000015428	PABPN1L	70	46.575	ENSPEMG00000016624	Pabpn1l	65	47.778	Peromyscus_maniculatus_bairdii
ENSGACG00000015428	PABPN1L	100	83.895	ENSPFOG00000007001	PABPN1L	100	83.895	Poecilia_formosa
ENSGACG00000015428	PABPN1L	100	83.895	ENSPLAG00000018431	PABPN1L	100	83.895	Poecilia_latipinna
ENSGACG00000015428	PABPN1L	100	83.895	ENSPMEG00000009108	PABPN1L	100	83.895	Poecilia_mexicana
ENSGACG00000015428	PABPN1L	67	81.522	ENSPMEG00000000169	-	91	81.522	Poecilia_mexicana
ENSGACG00000015428	PABPN1L	83	85.586	ENSPREG00000022533	PABPN1L	94	86.364	Poecilia_reticulata
ENSGACG00000015428	PABPN1L	72	51.220	ENSPPYG00000007655	PABPN1L	58	51.497	Pongo_abelii
ENSGACG00000015428	PABPN1L	72	49.756	ENSPVAG00000002716	PABPN1L	58	51.479	Pteropus_vampyrus
ENSGACG00000015428	PABPN1L	100	85.393	ENSPNYG00000004803	PABPN1L	100	85.393	Pundamilia_nyererei
ENSGACG00000015428	PABPN1L	72	50.244	ENSRBIG00000030740	PABPN1L	59	52.096	Rhinopithecus_bieti
ENSGACG00000015428	PABPN1L	72	50.244	ENSRROG00000032240	-	59	52.096	Rhinopithecus_roxellana
ENSGACG00000015428	PABPN1L	72	51.707	ENSRROG00000035483	-	59	52.695	Rhinopithecus_roxellana
ENSGACG00000015428	PABPN1L	72	51.456	ENSSBOG00000018410	PABPN1L	58	53.939	Saimiri_boliviensis_boliviensis
ENSGACG00000015428	PABPN1L	71	51.000	ENSSHAG00000010001	-	62	50.838	Sarcophilus_harrisii
ENSGACG00000015428	PABPN1L	100	82.418	ENSSMAG00000021348	PABPN1L	100	80.586	Scophthalmus_maximus
ENSGACG00000015428	PABPN1L	100	86.517	ENSSDUG00000006986	PABPN1L	100	86.517	Seriola_dumerili
ENSGACG00000015428	PABPN1L	100	86.517	ENSSLDG00000021845	PABPN1L	100	86.517	Seriola_lalandi_dorsalis
ENSGACG00000015428	PABPN1L	58	59.615	ENSSPUG00000007031	PABPN1L	70	52.632	Sphenodon_punctatus
ENSGACG00000015428	PABPN1L	100	86.517	ENSSPAG00000017978	PABPN1L	100	86.517	Stegastes_partitus
ENSGACG00000015428	PABPN1L	79	43.379	ENSSSCG00000036367	PABPN1L	63	51.397	Sus_scrofa
ENSGACG00000015428	PABPN1L	100	74.906	ENSTRUG00000024725	PABPN1L	100	74.906	Takifugu_rubripes
ENSGACG00000015428	PABPN1L	72	90.104	ENSTNIG00000009416	PABPN1L	100	90.104	Tetraodon_nigroviridis
ENSGACG00000015428	PABPN1L	57	56.250	ENSXETG00000011258	pabpn1l	72	55.696	Xenopus_tropicalis
ENSGACG00000015428	PABPN1L	79	87.204	ENSXCOG00000003254	PABPN1L	94	85.973	Xiphophorus_couchianus
ENSGACG00000015428	PABPN1L	73	89.340	ENSXMAG00000029090	PABPN1L	96	82.805	Xiphophorus_maculatus