EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000015476 (Gene tree)
Gene ID: -
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: PRP4 pre-mRNA processing factor 4 homolog (yeast)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5926 bases
Position: chrgroupXIV:119877-125802
Accession: ZDB-GENE-030131-5143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000020420	PRP4	PF08799.11	1.2e-14	1	1
ENSGACP00000020419	PRP4	PF08799.11	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000020458	-	1605	-	ENSGACP00000020419	503 (aa)	-	G3PS33
ENSGACT00000020459	-	1591	-	ENSGACP00000020420	501 (aa)	-	G3PS34

Gene Model

Click here to download ENSGACG00000015476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000015476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000015476	prpf4	57	33.333	ENSGACG00000018182	wdr5	91	33.333
ENSGACG00000015476	prpf4	59	32.394	ENSGACG00000011960	tbl3	85	32.394
ENSGACG00000015476	prpf4	56	35.625	ENSGACG00000007015	poc1a	69	35.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000015476	prpf4	99	69.246	ENSG00000136875	PRPF4	96	70.040	Homo_sapiens
ENSGACG00000015476	prpf4	99	81.856	ENSAPOG00000014132	prpf4	99	81.856	Acanthochromis_polyacanthus
ENSGACG00000015476	prpf4	99	68.849	ENSAMEG00000013048	PRPF4	94	69.643	Ailuropoda_melanoleuca
ENSGACG00000015476	prpf4	100	80.664	ENSACIG00000005579	prpf4	100	80.859	Amphilophus_citrinellus
ENSGACG00000015476	prpf4	100	81.641	ENSAOCG00000005457	prpf4	100	81.836	Amphiprion_ocellaris
ENSGACG00000015476	prpf4	100	81.445	ENSAPEG00000000776	prpf4	100	81.641	Amphiprion_percula
ENSGACG00000015476	prpf4	100	82.227	ENSATEG00000023013	prpf4	100	82.422	Anabas_testudineus
ENSGACG00000015476	prpf4	99	69.488	ENSAPLG00000006534	PRPF4	94	69.488	Anas_platyrhynchos
ENSGACG00000015476	prpf4	99	69.066	ENSACAG00000015110	PRPF4	98	69.066	Anolis_carolinensis
ENSGACG00000015476	prpf4	99	68.849	ENSANAG00000022464	PRPF4	92	69.643	Aotus_nancymaae
ENSGACG00000015476	prpf4	100	81.250	ENSACLG00000019031	prpf4	100	81.445	Astatotilapia_calliptera
ENSGACG00000015476	prpf4	100	59.231	ENSAMXG00000006756	prpf4	100	65.882	Astyanax_mexicanus
ENSGACG00000015476	prpf4	99	68.849	ENSBTAG00000004571	PRPF4	96	69.643	Bos_taurus
ENSGACG00000015476	prpf4	93	41.509	WBGene00007972	prp-4	95	41.719	Caenorhabditis_elegans
ENSGACG00000015476	prpf4	99	68.849	ENSCJAG00000017856	PRPF4	96	69.643	Callithrix_jacchus
ENSGACG00000015476	prpf4	99	68.849	ENSCAFG00000003224	PRPF4	93	69.643	Canis_familiaris
ENSGACG00000015476	prpf4	99	68.849	ENSCAFG00020022637	PRPF4	97	69.643	Canis_lupus_dingo
ENSGACG00000015476	prpf4	99	68.849	ENSCHIG00000024648	-	96	69.643	Capra_hircus
ENSGACG00000015476	prpf4	99	69.048	ENSTSYG00000010366	PRPF4	96	69.841	Carlito_syrichta
ENSGACG00000015476	prpf4	91	59.857	ENSCAPG00000008935	PRPF4	97	60.808	Cavia_aperea
ENSGACG00000015476	prpf4	99	68.452	ENSCPOG00000010747	-	96	69.246	Cavia_porcellus
ENSGACG00000015476	prpf4	99	63.889	ENSCPOG00000014729	-	96	64.484	Cavia_porcellus
ENSGACG00000015476	prpf4	99	68.651	ENSCCAG00000028990	PRPF4	96	69.444	Cebus_capucinus
ENSGACG00000015476	prpf4	99	68.849	ENSCATG00000021552	PRPF4	96	69.643	Cercocebus_atys
ENSGACG00000015476	prpf4	99	68.849	ENSCLAG00000013448	PRPF4	96	69.643	Chinchilla_lanigera
ENSGACG00000015476	prpf4	89	69.604	ENSCHOG00000007233	PRPF4	100	70.044	Choloepus_hoffmanni
ENSGACG00000015476	prpf4	99	68.555	ENSCPBG00000019136	PRPF4	73	68.945	Chrysemys_picta_bellii
ENSGACG00000015476	prpf4	100	56.178	ENSCING00000001299	-	100	56.178	Ciona_intestinalis
ENSGACG00000015476	prpf4	99	55.078	ENSCSAVG00000009178	-	99	55.292	Ciona_savignyi
ENSGACG00000015476	prpf4	99	68.849	ENSCANG00000003246	PRPF4	96	69.643	Colobus_angolensis_palliatus
ENSGACG00000015476	prpf4	99	69.048	ENSCGRG00001016992	Prpf4	96	69.841	Cricetulus_griseus_chok1gshd
ENSGACG00000015476	prpf4	99	69.048	ENSCGRG00000017560	Prpf4	96	69.841	Cricetulus_griseus_crigri
ENSGACG00000015476	prpf4	100	78.937	ENSCSEG00000020451	prpf4	100	79.134	Cynoglossus_semilaevis
ENSGACG00000015476	prpf4	100	72.549	ENSDARG00000067639	prpf4	100	72.745	Danio_rerio
ENSGACG00000015476	prpf4	99	68.651	ENSDNOG00000013203	PRPF4	96	69.444	Dasypus_novemcinctus
ENSGACG00000015476	prpf4	99	69.246	ENSDORG00000026275	Prpf4	96	70.040	Dipodomys_ordii
ENSGACG00000015476	prpf4	99	46.812	FBgn0036733	U4-U6-60K	99	47.177	Drosophila_melanogaster
ENSGACG00000015476	prpf4	99	69.444	ENSETEG00000020389	PRPF4	96	70.238	Echinops_telfairi
ENSGACG00000015476	prpf4	99	63.039	ENSEBUG00000015229	prpf4	88	63.039	Eptatretus_burgeri
ENSGACG00000015476	prpf4	99	68.849	ENSEASG00005022678	PRPF4	96	69.643	Equus_asinus_asinus
ENSGACG00000015476	prpf4	99	68.849	ENSECAG00000007072	PRPF4	96	69.643	Equus_caballus
ENSGACG00000015476	prpf4	83	72.083	ENSEEUG00000007480	PRPF4	95	55.455	Erinaceus_europaeus
ENSGACG00000015476	prpf4	100	73.281	ENSELUG00000007510	prpf4	100	73.281	Esox_lucius
ENSGACG00000015476	prpf4	99	68.849	ENSFCAG00000005514	PRPF4	96	69.643	Felis_catus
ENSGACG00000015476	prpf4	99	67.793	ENSFALG00000005423	PRPF4	85	68.243	Ficedula_albicollis
ENSGACG00000015476	prpf4	99	68.849	ENSFDAG00000005839	PRPF4	96	69.643	Fukomys_damarensis
ENSGACG00000015476	prpf4	100	80.664	ENSFHEG00000001300	prpf4	100	80.859	Fundulus_heteroclitus
ENSGACG00000015476	prpf4	99	69.685	ENSGALG00000008857	PRPF4	94	69.685	Gallus_gallus
ENSGACG00000015476	prpf4	94	73.795	ENSGAFG00000012164	prpf4	71	73.653	Gambusia_affinis
ENSGACG00000015476	prpf4	99	68.750	ENSGAGG00000025029	PRPF4	94	68.945	Gopherus_agassizii
ENSGACG00000015476	prpf4	99	69.246	ENSGGOG00000006943	PRPF4	96	70.040	Gorilla_gorilla
ENSGACG00000015476	prpf4	100	81.250	ENSHBUG00000000562	prpf4	100	81.445	Haplochromis_burtoni
ENSGACG00000015476	prpf4	99	55.754	ENSHGLG00000003838	-	96	56.151	Heterocephalus_glaber_female
ENSGACG00000015476	prpf4	95	60.532	ENSHGLG00000016628	-	95	60.532	Heterocephalus_glaber_female
ENSGACG00000015476	prpf4	99	68.849	ENSHGLG00000015191	PRPF4	96	69.643	Heterocephalus_glaber_female
ENSGACG00000015476	prpf4	99	55.754	ENSHGLG00100005571	-	96	56.151	Heterocephalus_glaber_male
ENSGACG00000015476	prpf4	100	70.980	ENSIPUG00000017956	PRPF4	100	71.373	Ictalurus_punctatus
ENSGACG00000015476	prpf4	99	69.048	ENSSTOG00000027833	PRPF4	96	69.841	Ictidomys_tridecemlineatus
ENSGACG00000015476	prpf4	99	68.849	ENSJJAG00000008838	Prpf4	96	69.643	Jaculus_jaculus
ENSGACG00000015476	prpf4	100	80.078	ENSKMAG00000013236	prpf4	100	80.469	Kryptolebias_marmoratus
ENSGACG00000015476	prpf4	100	83.137	ENSLBEG00000020611	prpf4	100	83.333	Labrus_bergylta
ENSGACG00000015476	prpf4	100	65.107	ENSLACG00000016317	PRPF4	98	65.953	Latimeria_chalumnae
ENSGACG00000015476	prpf4	100	72.353	ENSLOCG00000000581	prpf4	100	72.745	Lepisosteus_oculatus
ENSGACG00000015476	prpf4	99	68.849	ENSLAFG00000018225	PRPF4	96	69.643	Loxodonta_africana
ENSGACG00000015476	prpf4	99	68.651	ENSMFAG00000039397	PRPF4	96	69.444	Macaca_fascicularis
ENSGACG00000015476	prpf4	99	68.849	ENSMMUG00000005844	PRPF4	96	69.643	Macaca_mulatta
ENSGACG00000015476	prpf4	99	63.454	ENSMNEG00000033737	PRPF4	96	64.257	Macaca_nemestrina
ENSGACG00000015476	prpf4	99	68.849	ENSMLEG00000040284	PRPF4	96	69.643	Mandrillus_leucophaeus
ENSGACG00000015476	prpf4	100	81.250	ENSMAMG00000020141	prpf4	100	81.445	Mastacembelus_armatus
ENSGACG00000015476	prpf4	100	81.250	ENSMZEG00005023205	prpf4	100	81.445	Maylandia_zebra
ENSGACG00000015476	prpf4	99	69.094	ENSMGAG00000001796	PRPF4	94	69.094	Meleagris_gallopavo
ENSGACG00000015476	prpf4	99	69.048	ENSMAUG00000018022	Prpf4	96	69.841	Mesocricetus_auratus
ENSGACG00000015476	prpf4	99	68.627	ENSMICG00000015022	PRPF4	96	69.643	Microcebus_murinus
ENSGACG00000015476	prpf4	99	69.048	ENSMOCG00000018273	Prpf4	96	69.841	Microtus_ochrogaster
ENSGACG00000015476	prpf4	100	80.709	ENSMMOG00000021177	prpf4	100	80.906	Mola_mola
ENSGACG00000015476	prpf4	99	68.235	ENSMODG00000025096	-	94	68.898	Monodelphis_domestica
ENSGACG00000015476	prpf4	99	68.627	ENSMODG00000004444	-	97	69.291	Monodelphis_domestica
ENSGACG00000015476	prpf4	100	83.008	ENSMALG00000013624	prpf4	100	83.203	Monopterus_albus
ENSGACG00000015476	prpf4	99	69.048	MGP_CAROLIEiJ_G0026078	Prpf4	96	69.841	Mus_caroli
ENSGACG00000015476	prpf4	99	69.048	ENSMUSG00000066148	Prpf4	96	69.841	Mus_musculus
ENSGACG00000015476	prpf4	99	69.246	MGP_PahariEiJ_G0028413	Prpf4	96	70.040	Mus_pahari
ENSGACG00000015476	prpf4	99	69.048	MGP_SPRETEiJ_G0027042	Prpf4	96	69.841	Mus_spretus
ENSGACG00000015476	prpf4	99	68.849	ENSMPUG00000007883	PRPF4	96	69.643	Mustela_putorius_furo
ENSGACG00000015476	prpf4	99	68.849	ENSMLUG00000015309	-	93	69.643	Myotis_lucifugus
ENSGACG00000015476	prpf4	99	68.254	ENSMLUG00000008626	-	94	68.849	Myotis_lucifugus
ENSGACG00000015476	prpf4	99	63.889	ENSNGAG00000000468	Prpf4	96	64.683	Nannospalax_galili
ENSGACG00000015476	prpf4	100	81.250	ENSNBRG00000007972	prpf4	100	81.445	Neolamprologus_brichardi
ENSGACG00000015476	prpf4	99	68.849	ENSNLEG00000016647	PRPF4	96	69.643	Nomascus_leucogenys
ENSGACG00000015476	prpf4	99	68.431	ENSMEUG00000013256	PRPF4	98	69.094	Notamacropus_eugenii
ENSGACG00000015476	prpf4	99	68.849	ENSOPRG00000005302	PRPF4	96	69.643	Ochotona_princeps
ENSGACG00000015476	prpf4	99	68.849	ENSODEG00000018147	PRPF4	96	69.643	Octodon_degus
ENSGACG00000015476	prpf4	100	81.055	ENSONIG00000012671	prpf4	100	81.250	Oreochromis_niloticus
ENSGACG00000015476	prpf4	99	69.048	ENSOCUG00000005046	PRPF4	96	69.841	Oryctolagus_cuniculus
ENSGACG00000015476	prpf4	100	79.882	ENSORLG00000019641	prpf4	100	80.079	Oryzias_latipes
ENSGACG00000015476	prpf4	100	79.882	ENSORLG00020019438	prpf4	100	80.079	Oryzias_latipes_hni
ENSGACG00000015476	prpf4	100	79.684	ENSOMEG00000020941	prpf4	100	79.882	Oryzias_melastigma
ENSGACG00000015476	prpf4	99	65.079	ENSOGAG00000007802	PRPF4	94	65.873	Otolemur_garnettii
ENSGACG00000015476	prpf4	99	68.849	ENSOARG00000006319	PRPF4	93	69.643	Ovis_aries
ENSGACG00000015476	prpf4	99	69.246	ENSPPAG00000041797	PRPF4	96	70.040	Pan_paniscus
ENSGACG00000015476	prpf4	99	68.849	ENSPPRG00000014360	PRPF4	96	69.643	Panthera_pardus
ENSGACG00000015476	prpf4	99	68.849	ENSPTIG00000009574	PRPF4	96	69.643	Panthera_tigris_altaica
ENSGACG00000015476	prpf4	99	69.246	ENSPTRG00000021274	PRPF4	96	70.040	Pan_troglodytes
ENSGACG00000015476	prpf4	99	69.048	ENSPANG00000025776	PRPF4	92	69.841	Papio_anubis
ENSGACG00000015476	prpf4	100	73.281	ENSPKIG00000017259	prpf4	100	73.477	Paramormyrops_kingsleyae
ENSGACG00000015476	prpf4	99	67.969	ENSPSIG00000010713	PRPF4	89	68.359	Pelodiscus_sinensis
ENSGACG00000015476	prpf4	100	56.449	ENSPMGG00000000997	prpf4	98	57.757	Periophthalmus_magnuspinnatus
ENSGACG00000015476	prpf4	99	69.048	ENSPEMG00000024115	Prpf4	96	69.841	Peromyscus_maniculatus_bairdii
ENSGACG00000015476	prpf4	99	68.627	ENSPCIG00000003821	PRPF4	98	69.291	Phascolarctos_cinereus
ENSGACG00000015476	prpf4	100	75.835	ENSPFOG00000013524	prpf4	100	76.031	Poecilia_formosa
ENSGACG00000015476	prpf4	93	72.256	ENSPLAG00000011620	prpf4	97	72.086	Poecilia_latipinna
ENSGACG00000015476	prpf4	98	73.684	ENSPMEG00000006813	prpf4	100	73.977	Poecilia_mexicana
ENSGACG00000015476	prpf4	99	68.849	ENSPCAG00000002561	PRPF4	97	69.643	Procavia_capensis
ENSGACG00000015476	prpf4	99	68.849	ENSPCOG00000011975	PRPF4	96	69.643	Propithecus_coquereli
ENSGACG00000015476	prpf4	99	65.873	ENSPVAG00000004708	PRPF4	96	66.667	Pteropus_vampyrus
ENSGACG00000015476	prpf4	100	81.250	ENSPNYG00000008013	prpf4	100	81.445	Pundamilia_nyererei
ENSGACG00000015476	prpf4	100	71.765	ENSPNAG00000000697	prpf4	100	72.157	Pygocentrus_nattereri
ENSGACG00000015476	prpf4	99	69.048	ENSRNOG00000014777	Prpf4	96	69.841	Rattus_norvegicus
ENSGACG00000015476	prpf4	99	68.849	ENSRBIG00000040221	PRPF4	96	69.643	Rhinopithecus_bieti
ENSGACG00000015476	prpf4	99	68.849	ENSRROG00000040240	PRPF4	96	69.643	Rhinopithecus_roxellana
ENSGACG00000015476	prpf4	99	68.627	ENSSHAG00000017658	PRPF4	97	69.291	Sarcophilus_harrisii
ENSGACG00000015476	prpf4	100	72.745	ENSSFOG00015008963	prpf4	100	72.941	Scleropages_formosus
ENSGACG00000015476	prpf4	100	81.836	ENSSMAG00000008889	prpf4	100	82.031	Scophthalmus_maximus
ENSGACG00000015476	prpf4	99	81.856	ENSSDUG00000022083	prpf4	94	82.062	Seriola_dumerili
ENSGACG00000015476	prpf4	99	82.268	ENSSLDG00000008115	prpf4	94	82.474	Seriola_lalandi_dorsalis
ENSGACG00000015476	prpf4	99	68.945	ENSSPUG00000015582	PRPF4	98	69.336	Sphenodon_punctatus
ENSGACG00000015476	prpf4	100	77.864	ENSSPAG00000011286	prpf4	100	77.864	Stegastes_partitus
ENSGACG00000015476	prpf4	99	68.849	ENSSSCG00000024648	PRPF4	96	69.643	Sus_scrofa
ENSGACG00000015476	prpf4	99	69.048	ENSTGUG00000002623	PRPF4	100	70.325	Taeniopygia_guttata
ENSGACG00000015476	prpf4	100	78.082	ENSTRUG00000008853	prpf4	100	78.278	Takifugu_rubripes
ENSGACG00000015476	prpf4	100	80.118	ENSTNIG00000013250	prpf4	100	80.315	Tetraodon_nigroviridis
ENSGACG00000015476	prpf4	99	62.698	ENSTBEG00000000821	PRPF4	96	63.492	Tupaia_belangeri
ENSGACG00000015476	prpf4	89	73.256	ENSTTRG00000003246	PRPF4	85	73.256	Tursiops_truncatus
ENSGACG00000015476	prpf4	89	59.040	ENSUAMG00000018288	PRPF4	95	59.605	Ursus_americanus
ENSGACG00000015476	prpf4	99	68.254	ENSUMAG00000019375	PRPF4	96	69.048	Ursus_maritimus
ENSGACG00000015476	prpf4	99	68.651	ENSVPAG00000005281	PRPF4	96	69.444	Vicugna_pacos
ENSGACG00000015476	prpf4	99	68.110	ENSVVUG00000002476	PRPF4	99	68.898	Vulpes_vulpes
ENSGACG00000015476	prpf4	71	58.564	ENSXCOG00000006101	prpf4	93	61.463	Xiphophorus_couchianus
ENSGACG00000015476	prpf4	91	65.812	ENSXMAG00000002750	prpf4	100	67.829	Xiphophorus_maculatus