EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000015486 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6028 bases
Position: chrgroupXIV:167814-173841
Accession: ZDB-GENE-041114-114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000020435	YTH	PF04146.15	2.7e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000020474	-	2178	-	ENSGACP00000020435	695 (aa)	-	G3PS49

Gene Model

Click here to download ENSGACG00000015486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000015486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000015486	ythdc1	57	63.017	ENSG00000083896	YTHDC1	63	56.452	Homo_sapiens
ENSGACG00000015486	ythdc1	94	71.364	ENSAPOG00000013997	ythdc1	93	72.727	Acanthochromis_polyacanthus
ENSGACG00000015486	ythdc1	57	62.500	ENSAMEG00000005688	YTHDC1	57	63.084	Ailuropoda_melanoleuca
ENSGACG00000015486	ythdc1	79	82.192	ENSACIG00000019728	ythdc1	87	81.944	Amphilophus_citrinellus
ENSGACG00000015486	ythdc1	94	72.126	ENSAOCG00000000239	ythdc1	94	71.571	Amphiprion_ocellaris
ENSGACG00000015486	ythdc1	86	77.521	ENSAPEG00000000618	ythdc1	90	76.623	Amphiprion_percula
ENSGACG00000015486	ythdc1	85	76.833	ENSATEG00000023007	ythdc1	92	76.885	Anabas_testudineus
ENSGACG00000015486	ythdc1	57	64.000	ENSAPLG00000009921	YTHDC1	60	63.551	Anas_platyrhynchos
ENSGACG00000015486	ythdc1	57	62.529	ENSACAG00000009697	YTHDC1	58	62.558	Anolis_carolinensis
ENSGACG00000015486	ythdc1	57	62.774	ENSANAG00000001522	YTHDC1	58	62.326	Aotus_nancymaae
ENSGACG00000015486	ythdc1	94	71.839	ENSACLG00000019371	ythdc1	94	71.552	Astatotilapia_calliptera
ENSGACG00000015486	ythdc1	94	56.815	ENSAMXG00000006978	ythdc1	100	56.950	Astyanax_mexicanus
ENSGACG00000015486	ythdc1	57	62.238	ENSBTAG00000015572	YTHDC1	57	62.150	Bos_taurus
ENSGACG00000015486	ythdc1	57	62.774	ENSCJAG00000009934	YTHDC1	57	62.383	Callithrix_jacchus
ENSGACG00000015486	ythdc1	57	62.500	ENSCAFG00000002821	YTHDC1	57	63.084	Canis_familiaris
ENSGACG00000015486	ythdc1	57	62.500	ENSCAFG00020027112	YTHDC1	57	63.084	Canis_lupus_dingo
ENSGACG00000015486	ythdc1	57	57.248	ENSCHIG00000004810	YTHDC1	54	57.816	Capra_hircus
ENSGACG00000015486	ythdc1	57	62.774	ENSTSYG00000011668	YTHDC1	57	62.383	Carlito_syrichta
ENSGACG00000015486	ythdc1	57	55.916	ENSCPOG00000010929	YTHDC1	54	56.075	Cavia_porcellus
ENSGACG00000015486	ythdc1	57	62.774	ENSCCAG00000035754	YTHDC1	57	62.383	Cebus_capucinus
ENSGACG00000015486	ythdc1	57	63.017	ENSCATG00000036320	YTHDC1	57	62.326	Cercocebus_atys
ENSGACG00000015486	ythdc1	58	61.985	ENSCLAG00000005482	YTHDC1	58	62.093	Chinchilla_lanigera
ENSGACG00000015486	ythdc1	57	62.731	ENSCSAG00000005252	YTHDC1	57	62.383	Chlorocebus_sabaeus
ENSGACG00000015486	ythdc1	57	66.833	ENSCPBG00000021965	YTHDC1	62	63.318	Chrysemys_picta_bellii
ENSGACG00000015486	ythdc1	57	62.774	ENSCANG00000004769	YTHDC1	58	62.326	Colobus_angolensis_palliatus
ENSGACG00000015486	ythdc1	57	62.530	ENSCGRG00001000816	Ythdc1	57	62.093	Cricetulus_griseus_chok1gshd
ENSGACG00000015486	ythdc1	57	62.774	ENSCGRG00000009807	Ythdc1	57	62.150	Cricetulus_griseus_crigri
ENSGACG00000015486	ythdc1	94	66.908	ENSCSEG00000020404	ythdc1	94	67.341	Cynoglossus_semilaevis
ENSGACG00000015486	ythdc1	57	70.805	ENSCVAG00000022349	ythdc1	94	67.143	Cyprinodon_variegatus
ENSGACG00000015486	ythdc1	94	56.348	ENSDARG00000051953	ythdc1	92	57.143	Danio_rerio
ENSGACG00000015486	ythdc1	58	61.785	ENSDNOG00000004949	YTHDC1	57	62.617	Dasypus_novemcinctus
ENSGACG00000015486	ythdc1	57	62.774	ENSDORG00000013045	Ythdc1	58	62.383	Dipodomys_ordii
ENSGACG00000015486	ythdc1	54	73.016	ENSETEG00000001878	YTHDC1	51	73.016	Echinops_telfairi
ENSGACG00000015486	ythdc1	57	62.500	ENSEASG00005018383	YTHDC1	61	63.084	Equus_asinus_asinus
ENSGACG00000015486	ythdc1	52	68.378	ENSECAG00000018303	YTHDC1	61	63.084	Equus_caballus
ENSGACG00000015486	ythdc1	57	62.238	ENSEEUG00000015466	YTHDC1	57	62.850	Erinaceus_europaeus
ENSGACG00000015486	ythdc1	57	64.120	ENSELUG00000014029	ythdc1	52	68.508	Esox_lucius
ENSGACG00000015486	ythdc1	57	62.774	ENSFCAG00000026791	YTHDC1	57	63.084	Felis_catus
ENSGACG00000015486	ythdc1	76	60.938	ENSFALG00000006581	YTHDC1	87	63.882	Ficedula_albicollis
ENSGACG00000015486	ythdc1	57	62.439	ENSFDAG00000018560	YTHDC1	58	62.383	Fukomys_damarensis
ENSGACG00000015486	ythdc1	79	70.149	ENSFHEG00000001286	ythdc1	77	70.149	Fundulus_heteroclitus
ENSGACG00000015486	ythdc1	62	79.828	ENSGMOG00000018815	ythdc1	79	79.828	Gadus_morhua
ENSGACG00000015486	ythdc1	57	64.619	ENSGALG00000035906	YTHDC1	55	63.318	Gallus_gallus
ENSGACG00000015486	ythdc1	57	67.082	ENSGAGG00000007108	YTHDC1	57	67.830	Gopherus_agassizii
ENSGACG00000015486	ythdc1	57	63.017	ENSGGOG00000021958	YTHDC1	58	62.326	Gorilla_gorilla
ENSGACG00000015486	ythdc1	94	71.839	ENSHBUG00000019288	ythdc1	94	71.552	Haplochromis_burtoni
ENSGACG00000015486	ythdc1	57	62.439	ENSHGLG00000006319	-	58	62.326	Heterocephalus_glaber_female
ENSGACG00000015486	ythdc1	71	49.485	ENSHGLG00000003239	-	68	55.128	Heterocephalus_glaber_female
ENSGACG00000015486	ythdc1	71	49.485	ENSHGLG00100008060	-	68	55.128	Heterocephalus_glaber_male
ENSGACG00000015486	ythdc1	57	61.111	ENSHGLG00100001556	-	58	61.163	Heterocephalus_glaber_male
ENSGACG00000015486	ythdc1	66	64.929	ENSHCOG00000001520	ythdc1	93	66.492	Hippocampus_comes
ENSGACG00000015486	ythdc1	100	53.662	ENSIPUG00000018136	ythdc1	100	54.843	Ictalurus_punctatus
ENSGACG00000015486	ythdc1	57	62.712	ENSSTOG00000013652	YTHDC1	57	62.326	Ictidomys_tridecemlineatus
ENSGACG00000015486	ythdc1	57	62.530	ENSJJAG00000010268	Ythdc1	58	62.093	Jaculus_jaculus
ENSGACG00000015486	ythdc1	57	70.694	ENSKMAG00000006483	ythdc1	85	74.201	Kryptolebias_marmoratus
ENSGACG00000015486	ythdc1	81	91.111	ENSLBEG00000020831	ythdc1	89	91.111	Labrus_bergylta
ENSGACG00000015486	ythdc1	56	64.394	ENSLACG00000004893	YTHDC1	61	62.731	Latimeria_chalumnae
ENSGACG00000015486	ythdc1	94	49.931	ENSLOCG00000003045	ythdc1	92	52.899	Lepisosteus_oculatus
ENSGACG00000015486	ythdc1	83	50.162	ENSLAFG00000021592	YTHDC1	58	63.488	Loxodonta_africana
ENSGACG00000015486	ythdc1	57	62.774	ENSMFAG00000031927	YTHDC1	58	62.326	Macaca_fascicularis
ENSGACG00000015486	ythdc1	57	62.774	ENSMMUG00000002265	YTHDC1	58	62.326	Macaca_mulatta
ENSGACG00000015486	ythdc1	57	62.774	ENSMNEG00000033751	YTHDC1	58	62.326	Macaca_nemestrina
ENSGACG00000015486	ythdc1	57	63.017	ENSMLEG00000042147	YTHDC1	58	62.326	Mandrillus_leucophaeus
ENSGACG00000015486	ythdc1	57	76.037	ENSMAMG00000013122	ythdc1	92	69.559	Mastacembelus_armatus
ENSGACG00000015486	ythdc1	94	71.839	ENSMZEG00005023173	ythdc1	94	71.552	Maylandia_zebra
ENSGACG00000015486	ythdc1	57	63.765	ENSMGAG00000010391	YTHDC1	59	63.615	Meleagris_gallopavo
ENSGACG00000015486	ythdc1	57	62.530	ENSMAUG00000001286	Ythdc1	57	62.093	Mesocricetus_auratus
ENSGACG00000015486	ythdc1	58	63.221	ENSMICG00000034640	YTHDC1	57	62.791	Microcebus_murinus
ENSGACG00000015486	ythdc1	57	62.530	ENSMOCG00000020201	Ythdc1	58	62.093	Microtus_ochrogaster
ENSGACG00000015486	ythdc1	54	49.223	ENSMODG00000009173	-	74	50.689	Monodelphis_domestica
ENSGACG00000015486	ythdc1	95	37.413	ENSMODG00000010076	-	50	51.240	Monodelphis_domestica
ENSGACG00000015486	ythdc1	62	51.654	ENSMODG00000014337	-	66	54.494	Monodelphis_domestica
ENSGACG00000015486	ythdc1	86	77.190	ENSMALG00000013412	ythdc1	94	77.190	Monopterus_albus
ENSGACG00000015486	ythdc1	57	62.530	MGP_CAROLIEiJ_G0027347	Ythdc1	57	62.150	Mus_caroli
ENSGACG00000015486	ythdc1	58	62.260	ENSMUSG00000035851	Ythdc1	57	62.150	Mus_musculus
ENSGACG00000015486	ythdc1	58	62.260	MGP_PahariEiJ_G0017126	Ythdc1	57	62.150	Mus_pahari
ENSGACG00000015486	ythdc1	58	62.260	MGP_SPRETEiJ_G0028339	Ythdc1	57	62.150	Mus_spretus
ENSGACG00000015486	ythdc1	68	64.925	ENSMPUG00000001743	YTHDC1	65	64.179	Mustela_putorius_furo
ENSGACG00000015486	ythdc1	57	62.269	ENSMLUG00000016300	YTHDC1	58	62.850	Myotis_lucifugus
ENSGACG00000015486	ythdc1	71	77.295	ENSNBRG00000007663	ythdc1	87	77.859	Neolamprologus_brichardi
ENSGACG00000015486	ythdc1	57	61.521	ENSNLEG00000009202	YTHDC1	57	61.395	Nomascus_leucogenys
ENSGACG00000015486	ythdc1	54	66.452	ENSOPRG00000008986	YTHDC1	52	65.472	Ochotona_princeps
ENSGACG00000015486	ythdc1	57	61.951	ENSODEG00000001715	YTHDC1	58	61.860	Octodon_degus
ENSGACG00000015486	ythdc1	94	93.182	ENSONIG00000012651	ythdc1	90	93.333	Oreochromis_niloticus
ENSGACG00000015486	ythdc1	52	68.280	ENSOANG00000014398	YTHDC1	51	68.011	Ornithorhynchus_anatinus
ENSGACG00000015486	ythdc1	64	67.460	ENSOCUG00000015886	YTHDC1	63	67.568	Oryctolagus_cuniculus
ENSGACG00000015486	ythdc1	94	66.040	ENSORLG00000030544	ythdc1	95	65.942	Oryzias_latipes
ENSGACG00000015486	ythdc1	94	64.957	ENSORLG00020019316	ythdc1	95	66.136	Oryzias_latipes_hni
ENSGACG00000015486	ythdc1	94	65.896	ENSOMEG00000000551	ythdc1	95	66.327	Oryzias_melastigma
ENSGACG00000015486	ythdc1	57	62.963	ENSOGAG00000003362	YTHDC1	57	62.850	Otolemur_garnettii
ENSGACG00000015486	ythdc1	57	62.238	ENSOARG00000008633	YTHDC1	57	62.150	Ovis_aries
ENSGACG00000015486	ythdc1	57	63.017	ENSPPAG00000041315	YTHDC1	58	62.326	Pan_paniscus
ENSGACG00000015486	ythdc1	57	62.774	ENSPPRG00000011979	YTHDC1	57	63.023	Panthera_pardus
ENSGACG00000015486	ythdc1	57	62.287	ENSPTIG00000015527	YTHDC1	58	62.558	Panthera_tigris_altaica
ENSGACG00000015486	ythdc1	57	63.017	ENSPTRG00000016105	YTHDC1	58	62.326	Pan_troglodytes
ENSGACG00000015486	ythdc1	57	63.017	ENSPANG00000021590	YTHDC1	57	62.326	Papio_anubis
ENSGACG00000015486	ythdc1	93	51.891	ENSPKIG00000018497	ythdc1	92	53.143	Paramormyrops_kingsleyae
ENSGACG00000015486	ythdc1	57	63.059	ENSPSIG00000002782	YTHDC1	60	63.084	Pelodiscus_sinensis
ENSGACG00000015486	ythdc1	57	70.882	ENSPMGG00000000970	-	77	69.461	Periophthalmus_magnuspinnatus
ENSGACG00000015486	ythdc1	57	62.530	ENSPEMG00000013850	Ythdc1	58	62.150	Peromyscus_maniculatus_bairdii
ENSGACG00000015486	ythdc1	57	71.396	ENSPFOG00000013404	ythdc1	94	67.004	Poecilia_formosa
ENSGACG00000015486	ythdc1	57	71.396	ENSPLAG00000011079	ythdc1	86	72.998	Poecilia_latipinna
ENSGACG00000015486	ythdc1	57	71.396	ENSPMEG00000009238	ythdc1	94	67.294	Poecilia_mexicana
ENSGACG00000015486	ythdc1	57	73.697	ENSPREG00000016973	ythdc1	93	67.629	Poecilia_reticulata
ENSGACG00000015486	ythdc1	57	63.084	ENSPPYG00000014726	YTHDC1	65	62.383	Pongo_abelii
ENSGACG00000015486	ythdc1	58	58.293	ENSPCOG00000019105	YTHDC1	54	58.354	Propithecus_coquereli
ENSGACG00000015486	ythdc1	57	59.259	ENSPVAG00000015551	YTHDC1	56	59.813	Pteropus_vampyrus
ENSGACG00000015486	ythdc1	94	71.264	ENSPNYG00000011687	ythdc1	94	71.552	Pundamilia_nyererei
ENSGACG00000015486	ythdc1	94	56.714	ENSPNAG00000028365	ythdc1	100	56.091	Pygocentrus_nattereri
ENSGACG00000015486	ythdc1	57	62.212	ENSRNOG00000001996	Ythdc1	57	62.093	Rattus_norvegicus
ENSGACG00000015486	ythdc1	57	62.731	ENSRBIG00000028279	YTHDC1	58	62.617	Rhinopithecus_bieti
ENSGACG00000015486	ythdc1	57	62.774	ENSRROG00000035028	YTHDC1	58	62.326	Rhinopithecus_roxellana
ENSGACG00000015486	ythdc1	57	62.774	ENSSBOG00000022353	YTHDC1	58	62.326	Saimiri_boliviensis_boliviensis
ENSGACG00000015486	ythdc1	57	63.084	ENSSHAG00000002538	YTHDC1	65	63.084	Sarcophilus_harrisii
ENSGACG00000015486	ythdc1	94	54.779	ENSSFOG00015003298	ythdc1	78	66.522	Scleropages_formosus
ENSGACG00000015486	ythdc1	94	69.297	ENSSMAG00000009086	ythdc1	94	69.871	Scophthalmus_maximus
ENSGACG00000015486	ythdc1	94	73.104	ENSSDUG00000022008	ythdc1	94	73.820	Seriola_dumerili
ENSGACG00000015486	ythdc1	94	73.104	ENSSLDG00000007926	ythdc1	94	73.820	Seriola_lalandi_dorsalis
ENSGACG00000015486	ythdc1	57	61.806	ENSSARG00000010960	YTHDC1	72	62.383	Sorex_araneus
ENSGACG00000015486	ythdc1	57	63.081	ENSSPUG00000009357	YTHDC1	61	62.558	Sphenodon_punctatus
ENSGACG00000015486	ythdc1	94	72.532	ENSSPAG00000011449	ythdc1	94	72.103	Stegastes_partitus
ENSGACG00000015486	ythdc1	57	62.937	ENSSSCG00000035505	YTHDC1	61	63.023	Sus_scrofa
ENSGACG00000015486	ythdc1	57	63.765	ENSTGUG00000004452	-	59	63.785	Taeniopygia_guttata
ENSGACG00000015486	ythdc1	78	87.179	ENSTRUG00000010142	ythdc1	86	87.179	Takifugu_rubripes
ENSGACG00000015486	ythdc1	97	64.604	ENSTNIG00000013243	ythdc1	91	65.172	Tetraodon_nigroviridis
ENSGACG00000015486	ythdc1	57	63.294	ENSTBEG00000011546	YTHDC1	58	62.500	Tupaia_belangeri
ENSGACG00000015486	ythdc1	57	61.343	ENSTTRG00000005083	YTHDC1	57	61.916	Tursiops_truncatus
ENSGACG00000015486	ythdc1	57	62.774	ENSUAMG00000010388	YTHDC1	61	63.084	Ursus_americanus
ENSGACG00000015486	ythdc1	68	56.757	ENSUMAG00000013668	YTHDC1	72	56.757	Ursus_maritimus
ENSGACG00000015486	ythdc1	58	61.836	ENSVPAG00000009040	YTHDC1	56	62.654	Vicugna_pacos
ENSGACG00000015486	ythdc1	57	62.500	ENSVVUG00000005387	YTHDC1	61	63.084	Vulpes_vulpes
ENSGACG00000015486	ythdc1	94	50.000	ENSXETG00000017960	ythdc1	68	72.549	Xenopus_tropicalis
ENSGACG00000015486	ythdc1	52	74.312	ENSXCOG00000000530	ythdc1	84	68.908	Xiphophorus_couchianus
ENSGACG00000015486	ythdc1	94	67.873	ENSXMAG00000005196	ythdc1	94	67.873	Xiphophorus_maculatus