EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSGACG00000015674 (Gene tree)
Gene ID: -
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: growth factor independent 1A transcription repressor a
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2283 bases
Position: chrgroupIII:8866707-8868989
Accession: ZDB-GENE-050522-534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000020686	zf-C2H2	PF00096.26	2.8e-26	1	5
ENSGACP00000020686	zf-C2H2	PF00096.26	2.8e-26	2	5
ENSGACP00000020686	zf-C2H2	PF00096.26	2.8e-26	3	5
ENSGACP00000020686	zf-C2H2	PF00096.26	2.8e-26	4	5
ENSGACP00000020686	zf-C2H2	PF00096.26	2.8e-26	5	5
ENSGACP00000020685	zf-C2H2	PF00096.26	8.8e-26	1	5
ENSGACP00000020685	zf-C2H2	PF00096.26	8.8e-26	2	5
ENSGACP00000020685	zf-C2H2	PF00096.26	8.8e-26	3	5
ENSGACP00000020685	zf-C2H2	PF00096.26	8.8e-26	4	5
ENSGACP00000020685	zf-C2H2	PF00096.26	8.8e-26	5	5
ENSGACP00000020686	zf-met	PF12874.7	9.3e-08	1	2
ENSGACP00000020686	zf-met	PF12874.7	9.3e-08	2	2
ENSGACP00000020685	zf-met	PF12874.7	2.8e-07	1	2
ENSGACP00000020685	zf-met	PF12874.7	2.8e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000020724	-	1194	-	ENSGACP00000020685	397 (aa)	-	G3PSU9
ENSGACT00000020725	-	990	-	ENSGACP00000020686	329 (aa)	-	G3PSV0

Gene Model

Click here to download ENSGACG00000015674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000015674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000015674	gfi1aa	100	60.902	ENSGACG00000004257	gfi1ab	97	59.900
ENSGACG00000015674	gfi1aa	65	50.000	ENSGACG00000013660	-	99	50.000
ENSGACG00000015674	gfi1aa	57	43.421	ENSGACG00000014395	-	100	43.421
ENSGACG00000015674	gfi1aa	55	37.079	ENSGACG00000003372	zbtb47b	54	37.079
ENSGACG00000015674	gfi1aa	63	39.286	ENSGACG00000018088	si:dkey-7i4.5	100	39.286
ENSGACG00000015674	gfi1aa	56	38.922	ENSGACG00000011187	zbtb48	60	38.922
ENSGACG00000015674	gfi1aa	56	45.732	ENSGACG00000001358	-	99	45.732
ENSGACG00000015674	gfi1aa	71	41.615	ENSGACG00000018816	-	100	41.615
ENSGACG00000015674	gfi1aa	100	53.631	ENSGACG00000018134	gfi1b	100	53.631
ENSGACG00000015674	gfi1aa	51	42.105	ENSGACG00000008982	scrt1b	53	42.105
ENSGACG00000015674	gfi1aa	58	33.696	ENSGACG00000001166	-	98	34.507
ENSGACG00000015674	gfi1aa	51	44.000	ENSGACG00000016248	-	100	44.000
ENSGACG00000015674	gfi1aa	52	39.735	ENSGACG00000012611	-	90	39.735
ENSGACG00000015674	gfi1aa	74	41.071	ENSGACG00000018415	-	99	41.071
ENSGACG00000015674	gfi1aa	55	40.000	ENSGACG00000002626	si:ch211-216l23.1	54	39.623
ENSGACG00000015674	gfi1aa	78	46.914	ENSGACG00000010393	-	100	46.914
ENSGACG00000015674	gfi1aa	56	41.727	ENSGACG00000003258	znf319b	88	41.727
ENSGACG00000015674	gfi1aa	59	36.250	ENSGACG00000008733	znf646	78	36.250
ENSGACG00000015674	gfi1aa	57	41.096	ENSGACG00000001371	-	99	41.667
ENSGACG00000015674	gfi1aa	59	44.056	ENSGACG00000005239	-	88	44.056
ENSGACG00000015674	gfi1aa	99	43.452	ENSGACG00000004549	-	99	46.154
ENSGACG00000015674	gfi1aa	53	46.479	ENSGACG00000010051	-	82	46.479
ENSGACG00000015674	gfi1aa	51	37.037	ENSGACG00000001618	-	52	37.313
ENSGACG00000015674	gfi1aa	53	41.818	ENSGACG00000012415	GZF1	100	41.818
ENSGACG00000015674	gfi1aa	55	47.619	ENSGACG00000013652	-	100	48.466
ENSGACG00000015674	gfi1aa	51	45.833	ENSGACG00000013659	-	95	41.463
ENSGACG00000015674	gfi1aa	57	39.474	ENSGACG00000015729	-	98	39.474
ENSGACG00000015674	gfi1aa	62	41.667	ENSGACG00000019550	-	96	41.667
ENSGACG00000015674	gfi1aa	53	48.026	ENSGACG00000004478	-	100	48.026
ENSGACG00000015674	gfi1aa	53	40.964	ENSGACG00000001523	-	96	40.964
ENSGACG00000015674	gfi1aa	51	46.528	ENSGACG00000004765	-	100	46.528
ENSGACG00000015674	gfi1aa	53	31.875	ENSGACG00000014840	maza	87	31.875
ENSGACG00000015674	gfi1aa	51	44.853	ENSGACG00000006283	-	89	39.894
ENSGACG00000015674	gfi1aa	53	38.182	ENSGACG00000017935	snai2	98	35.833
ENSGACG00000015674	gfi1aa	54	44.521	ENSGACG00000012517	-	100	41.566
ENSGACG00000015674	gfi1aa	51	45.038	ENSGACG00000010515	ZNF628	99	45.038
ENSGACG00000015674	gfi1aa	51	39.450	ENSGACG00000014714	si:dkey-89b17.4	57	39.450
ENSGACG00000015674	gfi1aa	54	45.062	ENSGACG00000010352	si:ch211-207i20.2	63	45.062
ENSGACG00000015674	gfi1aa	51	40.397	ENSGACG00000005742	-	53	40.397
ENSGACG00000015674	gfi1aa	68	45.652	ENSGACG00000005553	znf236	99	38.095
ENSGACG00000015674	gfi1aa	58	39.521	ENSGACG00000001377	-	93	39.521
ENSGACG00000015674	gfi1aa	53	45.098	ENSGACG00000019863	-	99	38.690
ENSGACG00000015674	gfi1aa	51	48.246	ENSGACG00000004761	-	100	48.246
ENSGACG00000015674	gfi1aa	59	40.426	ENSGACG00000009449	znf526	64	40.426
ENSGACG00000015674	gfi1aa	58	43.269	ENSGACG00000010384	-	99	43.269