EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000015997 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 9465 bases
Position: chrgroupII:12759974-12769438
Accession: ZDB-GENE-040426-1997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000021112	Suf	PF05843.14	3.1e-83	1	1
ENSGACP00000021114	Suf	PF05843.14	3.1e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000021152	-	2532	-	ENSGACP00000021112	716 (aa)	-	G3PU25
ENSGACT00000021154	-	2151	-	ENSGACP00000021114	716 (aa)	-	G3PU27

Gene Model

Click here to download ENSGACG00000015997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000015997's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000015997	cstf3	100	90.529	ENSG00000176102	CSTF3	100	90.529	Homo_sapiens
ENSGACG00000015997	cstf3	100	98.184	ENSAPOG00000014054	cstf3	100	98.184	Acanthochromis_polyacanthus
ENSGACG00000015997	cstf3	99	91.102	ENSAMEG00000007187	CSTF3	98	91.102	Ailuropoda_melanoleuca
ENSGACG00000015997	cstf3	87	91.814	ENSACIG00000005539	cstf3	100	91.814	Amphilophus_citrinellus
ENSGACG00000015997	cstf3	100	98.184	ENSAOCG00000010930	cstf3	100	98.184	Amphiprion_ocellaris
ENSGACG00000015997	cstf3	100	98.184	ENSAPEG00000007903	cstf3	100	98.184	Amphiprion_percula
ENSGACG00000015997	cstf3	100	97.626	ENSATEG00000000190	cstf3	100	97.626	Anabas_testudineus
ENSGACG00000015997	cstf3	99	91.243	ENSAPLG00000007217	CSTF3	100	91.243	Anas_platyrhynchos
ENSGACG00000015997	cstf3	100	90.947	ENSACAG00000002823	CSTF3	100	90.947	Anolis_carolinensis
ENSGACG00000015997	cstf3	100	90.529	ENSANAG00000020699	CSTF3	100	90.560	Aotus_nancymaae
ENSGACG00000015997	cstf3	100	96.508	ENSACLG00000007820	cstf3	100	96.508	Astatotilapia_calliptera
ENSGACG00000015997	cstf3	100	92.479	ENSAMXG00000014198	cstf3	100	92.758	Astyanax_mexicanus
ENSGACG00000015997	cstf3	100	90.529	ENSBTAG00000008617	CSTF3	100	90.950	Bos_taurus
ENSGACG00000015997	cstf3	97	47.517	WBGene00006307	suf-1	99	47.517	Caenorhabditis_elegans
ENSGACG00000015997	cstf3	100	90.529	ENSCJAG00000005533	CSTF3	100	90.560	Callithrix_jacchus
ENSGACG00000015997	cstf3	100	90.529	ENSCAFG00000007264	CSTF3	100	90.529	Canis_familiaris
ENSGACG00000015997	cstf3	99	91.243	ENSCAFG00020002715	CSTF3	98	91.243	Canis_lupus_dingo
ENSGACG00000015997	cstf3	98	89.758	ENSCHIG00000016418	CSTF3	100	90.560	Capra_hircus
ENSGACG00000015997	cstf3	99	91.525	ENSTSYG00000000451	CSTF3	99	96.214	Carlito_syrichta
ENSGACG00000015997	cstf3	83	88.152	ENSCAPG00000010958	CSTF3	98	88.152	Cavia_aperea
ENSGACG00000015997	cstf3	100	90.529	ENSCPOG00000005545	CSTF3	100	90.756	Cavia_porcellus
ENSGACG00000015997	cstf3	100	90.529	ENSCCAG00000024790	CSTF3	96	96.214	Cebus_capucinus
ENSGACG00000015997	cstf3	100	90.529	ENSCATG00000007080	CSTF3	100	90.560	Cercocebus_atys
ENSGACG00000015997	cstf3	100	90.529	ENSCLAG00000016179	CSTF3	100	90.529	Chinchilla_lanigera
ENSGACG00000015997	cstf3	78	97.368	ENSCHOG00000002497	CSTF3	79	97.368	Choloepus_hoffmanni
ENSGACG00000015997	cstf3	100	90.669	ENSCPBG00000006753	CSTF3	100	90.669	Chrysemys_picta_bellii
ENSGACG00000015997	cstf3	99	61.859	ENSCING00000006401	-	99	61.859	Ciona_intestinalis
ENSGACG00000015997	cstf3	98	61.322	ENSCSAVG00000004851	-	100	61.322	Ciona_savignyi
ENSGACG00000015997	cstf3	100	90.529	ENSCANG00000035468	CSTF3	100	90.560	Colobus_angolensis_palliatus
ENSGACG00000015997	cstf3	100	90.390	ENSCGRG00001014773	Cstf3	100	90.390	Cricetulus_griseus_chok1gshd
ENSGACG00000015997	cstf3	100	90.390	ENSCGRG00000004142	Cstf3	100	90.390	Cricetulus_griseus_crigri
ENSGACG00000015997	cstf3	100	96.927	ENSCSEG00000014283	cstf3	100	96.927	Cynoglossus_semilaevis
ENSGACG00000015997	cstf3	100	95.531	ENSCVAG00000019739	cstf3	100	95.531	Cyprinodon_variegatus
ENSGACG00000015997	cstf3	100	93.863	ENSDARG00000018904	cstf3	100	93.863	Danio_rerio
ENSGACG00000015997	cstf3	99	91.102	ENSDNOG00000007366	CSTF3	99	91.102	Dasypus_novemcinctus
ENSGACG00000015997	cstf3	99	83.780	ENSDORG00000005898	Cstf3	99	83.780	Dipodomys_ordii
ENSGACG00000015997	cstf3	98	56.887	FBgn0003559	su(f)	98	56.887	Drosophila_melanogaster
ENSGACG00000015997	cstf3	89	85.358	ENSETEG00000017097	CSTF3	90	85.358	Echinops_telfairi
ENSGACG00000015997	cstf3	84	74.461	ENSEBUG00000015459	cstf3	96	74.461	Eptatretus_burgeri
ENSGACG00000015997	cstf3	99	89.831	ENSEASG00005019884	CSTF3	96	96.214	Equus_asinus_asinus
ENSGACG00000015997	cstf3	99	89.831	ENSECAG00000023338	CSTF3	96	96.214	Equus_caballus
ENSGACG00000015997	cstf3	100	85.794	ENSEEUG00000015167	CSTF3	100	85.794	Erinaceus_europaeus
ENSGACG00000015997	cstf3	100	95.537	ENSELUG00000023393	cstf3	100	95.537	Esox_lucius
ENSGACG00000015997	cstf3	100	90.669	ENSFCAG00000030711	CSTF3	100	90.669	Felis_catus
ENSGACG00000015997	cstf3	93	92.922	ENSFALG00000010764	CSTF3	100	89.708	Ficedula_albicollis
ENSGACG00000015997	cstf3	100	90.669	ENSFDAG00000012082	CSTF3	100	90.669	Fukomys_damarensis
ENSGACG00000015997	cstf3	100	95.391	ENSFHEG00000020623	cstf3	100	95.391	Fundulus_heteroclitus
ENSGACG00000015997	cstf3	100	95.265	ENSGMOG00000012275	cstf3	100	95.265	Gadus_morhua
ENSGACG00000015997	cstf3	100	90.251	ENSGALG00000011685	CSTF3	100	90.251	Gallus_gallus
ENSGACG00000015997	cstf3	100	95.670	ENSGAFG00000002181	cstf3	100	95.670	Gambusia_affinis
ENSGACG00000015997	cstf3	100	90.669	ENSGAGG00000006200	CSTF3	100	90.669	Gopherus_agassizii
ENSGACG00000015997	cstf3	99	85.452	ENSGGOG00000026591	CSTF3	96	91.314	Gorilla_gorilla
ENSGACG00000015997	cstf3	100	96.648	ENSHBUG00000016656	cstf3	100	96.648	Haplochromis_burtoni
ENSGACG00000015997	cstf3	100	90.390	ENSHGLG00000017834	CSTF3	100	90.390	Heterocephalus_glaber_female
ENSGACG00000015997	cstf3	100	90.390	ENSHGLG00100018042	CSTF3	100	90.390	Heterocephalus_glaber_male
ENSGACG00000015997	cstf3	100	93.296	ENSHCOG00000015218	cstf3	100	93.296	Hippocampus_comes
ENSGACG00000015997	cstf3	100	92.887	ENSIPUG00000013170	CSTF3	100	92.887	Ictalurus_punctatus
ENSGACG00000015997	cstf3	100	90.529	ENSSTOG00000013306	CSTF3	100	90.529	Ictidomys_tridecemlineatus
ENSGACG00000015997	cstf3	99	80.932	ENSJJAG00000018430	Cstf3	99	80.505	Jaculus_jaculus
ENSGACG00000015997	cstf3	100	95.251	ENSKMAG00000010916	cstf3	100	95.251	Kryptolebias_marmoratus
ENSGACG00000015997	cstf3	100	98.464	ENSLBEG00000002306	cstf3	100	98.464	Labrus_bergylta
ENSGACG00000015997	cstf3	100	90.656	ENSLACG00000017296	CSTF3	100	90.656	Latimeria_chalumnae
ENSGACG00000015997	cstf3	100	93.733	ENSLOCG00000004415	cstf3	100	93.733	Lepisosteus_oculatus
ENSGACG00000015997	cstf3	99	91.139	ENSLAFG00000008712	CSTF3	99	91.139	Loxodonta_africana
ENSGACG00000015997	cstf3	100	90.529	ENSMFAG00000029516	CSTF3	100	90.560	Macaca_fascicularis
ENSGACG00000015997	cstf3	100	90.529	ENSMMUG00000002542	CSTF3	100	90.529	Macaca_mulatta
ENSGACG00000015997	cstf3	100	90.529	ENSMNEG00000021807	CSTF3	100	90.560	Macaca_nemestrina
ENSGACG00000015997	cstf3	100	90.529	ENSMLEG00000039594	CSTF3	97	93.987	Mandrillus_leucophaeus
ENSGACG00000015997	cstf3	100	97.626	ENSMAMG00000020423	cstf3	100	97.626	Mastacembelus_armatus
ENSGACG00000015997	cstf3	100	96.508	ENSMZEG00005012082	cstf3	100	96.508	Maylandia_zebra
ENSGACG00000015997	cstf3	100	90.111	ENSMGAG00000001383	CSTF3	100	90.111	Meleagris_gallopavo
ENSGACG00000015997	cstf3	100	90.390	ENSMAUG00000002487	Cstf3	100	90.390	Mesocricetus_auratus
ENSGACG00000015997	cstf3	100	90.251	ENSMICG00000004784	CSTF3	100	90.251	Microcebus_murinus
ENSGACG00000015997	cstf3	100	90.390	ENSMOCG00000017583	Cstf3	100	90.390	Microtus_ochrogaster
ENSGACG00000015997	cstf3	99	97.599	ENSMMOG00000016026	cstf3	95	97.599	Mola_mola
ENSGACG00000015997	cstf3	100	90.947	ENSMODG00000009745	-	100	90.947	Monodelphis_domestica
ENSGACG00000015997	cstf3	100	80.084	ENSMODG00000025205	-	100	80.084	Monodelphis_domestica
ENSGACG00000015997	cstf3	100	97.486	ENSMALG00000012050	cstf3	100	97.486	Monopterus_albus
ENSGACG00000015997	cstf3	100	90.390	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.390	Mus_caroli
ENSGACG00000015997	cstf3	100	90.390	ENSMUSG00000027176	Cstf3	100	90.390	Mus_musculus
ENSGACG00000015997	cstf3	100	90.390	MGP_PahariEiJ_G0025464	Cstf3	100	90.390	Mus_pahari
ENSGACG00000015997	cstf3	100	90.390	MGP_SPRETEiJ_G0024939	Cstf3	100	90.390	Mus_spretus
ENSGACG00000015997	cstf3	100	90.390	ENSMPUG00000011457	CSTF3	100	90.390	Mustela_putorius_furo
ENSGACG00000015997	cstf3	99	91.243	ENSMLUG00000003073	-	99	91.243	Myotis_lucifugus
ENSGACG00000015997	cstf3	100	88.022	ENSMLUG00000026022	-	100	88.022	Myotis_lucifugus
ENSGACG00000015997	cstf3	100	90.251	ENSNGAG00000010677	Cstf3	100	90.251	Nannospalax_galili
ENSGACG00000015997	cstf3	87	96.950	ENSNBRG00000007345	cstf3	100	96.950	Neolamprologus_brichardi
ENSGACG00000015997	cstf3	100	90.529	ENSNLEG00000017901	CSTF3	97	93.764	Nomascus_leucogenys
ENSGACG00000015997	cstf3	73	89.675	ENSMEUG00000005640	-	100	89.675	Notamacropus_eugenii
ENSGACG00000015997	cstf3	66	92.754	ENSOPRG00000000199	-	66	92.754	Ochotona_princeps
ENSGACG00000015997	cstf3	99	91.139	ENSODEG00000016737	-	99	91.139	Octodon_degus
ENSGACG00000015997	cstf3	89	78.774	ENSODEG00000006311	-	97	78.774	Octodon_degus
ENSGACG00000015997	cstf3	100	96.508	ENSONIG00000005563	cstf3	100	96.508	Oreochromis_niloticus
ENSGACG00000015997	cstf3	90	90.000	ENSOANG00000015140	CSTF3	100	90.000	Ornithorhynchus_anatinus
ENSGACG00000015997	cstf3	99	90.858	ENSOCUG00000015417	CSTF3	99	90.858	Oryctolagus_cuniculus
ENSGACG00000015997	cstf3	100	94.693	ENSORLG00000009762	cstf3	100	94.693	Oryzias_latipes
ENSGACG00000015997	cstf3	100	94.693	ENSORLG00020005540	cstf3	100	94.693	Oryzias_latipes_hni
ENSGACG00000015997	cstf3	100	94.832	ENSORLG00015003551	cstf3	100	94.832	Oryzias_latipes_hsok
ENSGACG00000015997	cstf3	100	95.251	ENSOMEG00000003848	cstf3	100	95.251	Oryzias_melastigma
ENSGACG00000015997	cstf3	100	90.153	ENSOGAG00000010229	CSTF3	100	90.153	Otolemur_garnettii
ENSGACG00000015997	cstf3	90	90.669	ENSOARG00000017271	CSTF3	99	90.669	Ovis_aries
ENSGACG00000015997	cstf3	99	87.853	ENSPPAG00000027358	CSTF3	99	87.853	Pan_paniscus
ENSGACG00000015997	cstf3	100	90.669	ENSPPRG00000016852	CSTF3	100	90.669	Panthera_pardus
ENSGACG00000015997	cstf3	100	90.669	ENSPTIG00000008716	CSTF3	100	90.669	Panthera_tigris_altaica
ENSGACG00000015997	cstf3	100	90.529	ENSPTRG00000003485	CSTF3	100	90.529	Pan_troglodytes
ENSGACG00000015997	cstf3	100	90.529	ENSPANG00000013722	CSTF3	97	93.987	Papio_anubis
ENSGACG00000015997	cstf3	100	93.584	ENSPKIG00000023648	cstf3	100	93.584	Paramormyrops_kingsleyae
ENSGACG00000015997	cstf3	100	90.808	ENSPSIG00000009173	CSTF3	100	90.808	Pelodiscus_sinensis
ENSGACG00000015997	cstf3	77	97.810	ENSPMGG00000000164	cstf3	99	97.810	Periophthalmus_magnuspinnatus
ENSGACG00000015997	cstf3	100	90.390	ENSPEMG00000011481	Cstf3	100	90.390	Peromyscus_maniculatus_bairdii
ENSGACG00000015997	cstf3	99	79.155	ENSPMAG00000007282	cstf3	99	79.325	Petromyzon_marinus
ENSGACG00000015997	cstf3	100	76.634	ENSPCIG00000030419	-	90	76.912	Phascolarctos_cinereus
ENSGACG00000015997	cstf3	99	89.296	ENSPCIG00000026406	-	100	90.880	Phascolarctos_cinereus
ENSGACG00000015997	cstf3	100	95.950	ENSPFOG00000017239	cstf3	100	95.950	Poecilia_formosa
ENSGACG00000015997	cstf3	100	95.950	ENSPLAG00000009456	cstf3	100	95.950	Poecilia_latipinna
ENSGACG00000015997	cstf3	100	95.950	ENSPMEG00000010320	cstf3	100	95.950	Poecilia_mexicana
ENSGACG00000015997	cstf3	100	95.950	ENSPREG00000013549	cstf3	100	95.950	Poecilia_reticulata
ENSGACG00000015997	cstf3	100	90.529	ENSPPYG00000003375	CSTF3	100	90.529	Pongo_abelii
ENSGACG00000015997	cstf3	70	95.122	ENSPCAG00000008025	-	70	95.122	Procavia_capensis
ENSGACG00000015997	cstf3	100	85.237	ENSPCOG00000014417	CSTF3	100	85.237	Propithecus_coquereli
ENSGACG00000015997	cstf3	100	85.376	ENSPVAG00000002350	CSTF3	100	85.376	Pteropus_vampyrus
ENSGACG00000015997	cstf3	100	96.648	ENSPNYG00000018259	cstf3	100	96.648	Pundamilia_nyererei
ENSGACG00000015997	cstf3	100	94.700	ENSPNAG00000020182	cstf3	100	94.700	Pygocentrus_nattereri
ENSGACG00000015997	cstf3	87	90.080	ENSRNOG00000012089	Cstf3	100	90.080	Rattus_norvegicus
ENSGACG00000015997	cstf3	99	89.831	ENSRBIG00000044258	CSTF3	100	90.560	Rhinopithecus_bieti
ENSGACG00000015997	cstf3	100	90.529	ENSRROG00000043450	CSTF3	100	90.560	Rhinopithecus_roxellana
ENSGACG00000015997	cstf3	100	90.529	ENSSBOG00000024764	CSTF3	98	96.214	Saimiri_boliviensis_boliviensis
ENSGACG00000015997	cstf3	100	81.476	ENSSHAG00000003135	-	99	81.476	Sarcophilus_harrisii
ENSGACG00000015997	cstf3	99	91.525	ENSSHAG00000018128	-	99	91.525	Sarcophilus_harrisii
ENSGACG00000015997	cstf3	100	93.584	ENSSFOG00015022133	cstf3	100	93.584	Scleropages_formosus
ENSGACG00000015997	cstf3	100	97.486	ENSSMAG00000002197	cstf3	100	97.486	Scophthalmus_maximus
ENSGACG00000015997	cstf3	100	97.905	ENSSDUG00000020426	cstf3	100	97.905	Seriola_dumerili
ENSGACG00000015997	cstf3	100	97.905	ENSSLDG00000025649	cstf3	100	97.905	Seriola_lalandi_dorsalis
ENSGACG00000015997	cstf3	100	90.390	ENSSARG00000000391	CSTF3	100	90.390	Sorex_araneus
ENSGACG00000015997	cstf3	96	91.172	ENSSPUG00000010546	CSTF3	100	91.172	Sphenodon_punctatus
ENSGACG00000015997	cstf3	100	98.324	ENSSPAG00000004958	cstf3	100	98.324	Stegastes_partitus
ENSGACG00000015997	cstf3	99	90.999	ENSSSCG00000040954	CSTF3	99	90.999	Sus_scrofa
ENSGACG00000015997	cstf3	99	90.678	ENSTGUG00000005010	CSTF3	100	90.678	Taeniopygia_guttata
ENSGACG00000015997	cstf3	100	96.508	ENSTRUG00000004959	cstf3	100	96.508	Takifugu_rubripes
ENSGACG00000015997	cstf3	99	96.751	ENSTNIG00000013811	cstf3	99	96.751	Tetraodon_nigroviridis
ENSGACG00000015997	cstf3	89	87.850	ENSTBEG00000001544	CSTF3	90	87.850	Tupaia_belangeri
ENSGACG00000015997	cstf3	100	87.744	ENSTTRG00000016366	CSTF3	100	87.744	Tursiops_truncatus
ENSGACG00000015997	cstf3	99	90.960	ENSUMAG00000018971	CSTF3	100	90.240	Ursus_maritimus
ENSGACG00000015997	cstf3	100	90.390	ENSVPAG00000007800	CSTF3	100	90.390	Vicugna_pacos
ENSGACG00000015997	cstf3	99	91.243	ENSVVUG00000014938	CSTF3	100	90.560	Vulpes_vulpes
ENSGACG00000015997	cstf3	88	75.312	ENSXETG00000021399	cstf3	100	76.214	Xenopus_tropicalis
ENSGACG00000015997	cstf3	66	42.324	ENSXETG00000017946	-	99	42.324	Xenopus_tropicalis
ENSGACG00000015997	cstf3	87	95.666	ENSXCOG00000011741	cstf3	100	95.666	Xiphophorus_couchianus
ENSGACG00000015997	cstf3	100	95.810	ENSXMAG00000009545	cstf3	100	95.810	Xiphophorus_maculatus