EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000016033 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 13259 bases
Position: chrgroupIX:915430-928688
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000021166	ResIII	PF04851.15	1.5e-08	1	1
ENSGACP00000021166	BRK	PF07533.16	5.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000021206	-	4905	-	ENSGACP00000021166	1635 (aa)	-	G3PU79

Gene Model

Click here to download ENSGACG00000016033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000016033	-	99	66.867	ENSGACG00000014488	SMARCA2	99	66.068
ENSGACG00000016033	-	95	79.218	ENSGACG00000006691	smarca4a	99	79.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016033	-	99	79.234	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSGACG00000016033	-	77	81.747	ENSAPOG00000003509	smarca4a	98	80.775	Acanthochromis_polyacanthus
ENSGACG00000016033	-	96	87.936	ENSAPOG00000004542	SMARCA4	99	87.934	Acanthochromis_polyacanthus
ENSGACG00000016033	-	99	78.132	ENSAMEG00000010868	SMARCA4	99	79.655	Ailuropoda_melanoleuca
ENSGACG00000016033	-	99	79.688	ENSACIG00000021550	smarca4a	98	80.349	Amphilophus_citrinellus
ENSGACG00000016033	-	96	84.324	ENSACIG00000003035	-	97	85.346	Amphilophus_citrinellus
ENSGACG00000016033	-	95	88.557	ENSAOCG00000009450	-	97	88.748	Amphiprion_ocellaris
ENSGACG00000016033	-	91	79.064	ENSAOCG00000019167	smarca4a	100	80.214	Amphiprion_ocellaris
ENSGACG00000016033	-	91	79.130	ENSAPEG00000015559	smarca4a	100	80.281	Amphiprion_percula
ENSGACG00000016033	-	100	86.562	ENSAPEG00000023108	-	99	86.853	Amphiprion_percula
ENSGACG00000016033	-	100	85.749	ENSATEG00000001094	-	99	85.868	Anabas_testudineus
ENSGACG00000016033	-	99	79.664	ENSATEG00000011524	smarca4a	99	80.180	Anabas_testudineus
ENSGACG00000016033	-	99	78.802	ENSANAG00000036991	SMARCA4	99	79.893	Aotus_nancymaae
ENSGACG00000016033	-	99	79.988	ENSACLG00000000163	smarca4a	97	81.553	Astatotilapia_calliptera
ENSGACG00000016033	-	96	87.377	ENSACLG00000008638	-	98	87.439	Astatotilapia_calliptera
ENSGACG00000016033	-	97	78.392	ENSAMXG00000021023	smarca4a	99	77.710	Astyanax_mexicanus
ENSGACG00000016033	-	95	82.606	ENSAMXG00000011238	-	98	83.755	Astyanax_mexicanus
ENSGACG00000016033	-	99	79.770	ENSBTAG00000019220	SMARCA4	99	80.872	Bos_taurus
ENSGACG00000016033	-	99	78.310	ENSCJAG00000005936	SMARCA4	99	80.012	Callithrix_jacchus
ENSGACG00000016033	-	99	78.323	ENSCAFG00000017584	SMARCA4	99	80.591	Canis_familiaris
ENSGACG00000016033	-	99	78.323	ENSCAFG00020024620	SMARCA4	98	80.530	Canis_lupus_dingo
ENSGACG00000016033	-	100	76.225	ENSCHIG00000015318	SMARCA4	99	77.509	Capra_hircus
ENSGACG00000016033	-	99	80.194	ENSTSYG00000012966	SMARCA4	99	80.993	Carlito_syrichta
ENSGACG00000016033	-	95	76.324	ENSCAPG00000015932	SMARCA4	94	84.846	Cavia_aperea
ENSGACG00000016033	-	99	78.563	ENSCPOG00000015549	SMARCA4	99	80.591	Cavia_porcellus
ENSGACG00000016033	-	100	75.456	ENSCCAG00000031660	SMARCA4	99	76.891	Cebus_capucinus
ENSGACG00000016033	-	99	78.443	ENSCATG00000029530	SMARCA4	99	80.651	Cercocebus_atys
ENSGACG00000016033	-	99	80.012	ENSCLAG00000011946	SMARCA4	99	80.993	Chinchilla_lanigera
ENSGACG00000016033	-	100	79.869	ENSCPBG00000009994	SMARCA4	99	80.774	Chrysemys_picta_bellii
ENSGACG00000016033	-	99	78.383	ENSCANG00000036013	SMARCA4	99	80.651	Colobus_angolensis_palliatus
ENSGACG00000016033	-	81	83.702	ENSCGRG00001016732	Smarca4	99	80.410	Cricetulus_griseus_chok1gshd
ENSGACG00000016033	-	81	83.702	ENSCGRG00000017242	Smarca4	99	80.410	Cricetulus_griseus_crigri
ENSGACG00000016033	-	97	79.213	ENSCSEG00000014771	smarca4a	100	79.181	Cynoglossus_semilaevis
ENSGACG00000016033	-	99	85.504	ENSCVAG00000003018	-	98	86.302	Cyprinodon_variegatus
ENSGACG00000016033	-	99	78.131	ENSCVAG00000006979	smarca4a	99	79.424	Cyprinodon_variegatus
ENSGACG00000016033	-	97	80.823	ENSDARG00000077226	smarca4a	99	80.981	Danio_rerio
ENSGACG00000016033	-	93	81.254	ENSDARG00000104339	SMARCA4	96	80.482	Danio_rerio
ENSGACG00000016033	-	81	80.185	ENSDNOG00000048847	SMARCA4	91	85.143	Dasypus_novemcinctus
ENSGACG00000016033	-	85	75.964	ENSDORG00000002544	Smarca4	92	77.535	Dipodomys_ordii
ENSGACG00000016033	-	95	73.109	ENSETEG00000013361	SMARCA4	94	73.189	Echinops_telfairi
ENSGACG00000016033	-	100	78.179	ENSEASG00005006167	SMARCA4	99	78.842	Equus_asinus_asinus
ENSGACG00000016033	-	100	78.238	ENSECAG00000008334	SMARCA4	99	80.410	Equus_caballus
ENSGACG00000016033	-	99	79.461	ENSELUG00000010247	smarca4a	99	78.520	Esox_lucius
ENSGACG00000016033	-	99	74.833	ENSELUG00000023232	-	98	74.293	Esox_lucius
ENSGACG00000016033	-	99	79.234	ENSFCAG00000004894	SMARCA4	99	80.904	Felis_catus
ENSGACG00000016033	-	75	85.230	ENSFALG00000004208	SMARCA4	95	79.585	Ficedula_albicollis
ENSGACG00000016033	-	93	81.364	ENSFDAG00000012237	SMARCA4	97	82.349	Fukomys_damarensis
ENSGACG00000016033	-	100	85.406	ENSFHEG00000007902	-	99	85.773	Fundulus_heteroclitus
ENSGACG00000016033	-	95	78.536	ENSFHEG00000010182	smarca4a	99	79.222	Fundulus_heteroclitus
ENSGACG00000016033	-	77	81.473	ENSGMOG00000002649	smarca4a	92	72.964	Gadus_morhua
ENSGACG00000016033	-	93	87.325	ENSGMOG00000005756	-	93	86.964	Gadus_morhua
ENSGACG00000016033	-	72	83.138	ENSGALG00000047145	SMARCA4	100	84.074	Gallus_gallus
ENSGACG00000016033	-	99	81.261	ENSGAFG00000008827	-	98	81.416	Gambusia_affinis
ENSGACG00000016033	-	89	80.787	ENSGAFG00000014900	smarca4a	97	80.841	Gambusia_affinis
ENSGACG00000016033	-	100	79.869	ENSGAGG00000016757	SMARCA4	99	80.774	Gopherus_agassizii
ENSGACG00000016033	-	99	78.443	ENSGGOG00000009882	SMARCA4	99	80.651	Gorilla_gorilla
ENSGACG00000016033	-	100	85.422	ENSHBUG00000005447	-	99	86.241	Haplochromis_burtoni
ENSGACG00000016033	-	99	80.168	ENSHBUG00000021172	smarca4a	99	80.589	Haplochromis_burtoni
ENSGACG00000016033	-	99	80.470	ENSHGLG00000010519	SMARCA4	99	80.904	Heterocephalus_glaber_female
ENSGACG00000016033	-	100	79.380	ENSHGLG00100013774	SMARCA4	99	80.530	Heterocephalus_glaber_male
ENSGACG00000016033	-	96	81.359	ENSHCOG00000009510	smarca4a	97	81.366	Hippocampus_comes
ENSGACG00000016033	-	98	81.635	ENSIPUG00000016346	-	99	80.795	Ictalurus_punctatus
ENSGACG00000016033	-	96	79.443	ENSIPUG00000006107	smarca4a	99	79.214	Ictalurus_punctatus
ENSGACG00000016033	-	99	78.995	ENSSTOG00000007939	SMARCA4	99	80.723	Ictidomys_tridecemlineatus
ENSGACG00000016033	-	99	80.338	ENSJJAG00000012877	Smarca4	99	80.723	Jaculus_jaculus
ENSGACG00000016033	-	100	78.759	ENSKMAG00000011931	smarca4a	99	80.060	Kryptolebias_marmoratus
ENSGACG00000016033	-	100	85.181	ENSKMAG00000019518	-	98	87.218	Kryptolebias_marmoratus
ENSGACG00000016033	-	95	83.084	ENSLBEG00000020655	-	98	74.557	Labrus_bergylta
ENSGACG00000016033	-	93	80.197	ENSLBEG00000017383	smarca4a	98	79.535	Labrus_bergylta
ENSGACG00000016033	-	51	79.147	ENSLACG00000015309	SMARCA4	100	79.004	Latimeria_chalumnae
ENSGACG00000016033	-	99	77.542	ENSLOCG00000007820	smarca4a	99	77.966	Lepisosteus_oculatus
ENSGACG00000016033	-	99	78.383	ENSLAFG00000001433	SMARCA4	99	80.591	Loxodonta_africana
ENSGACG00000016033	-	99	78.443	ENSMFAG00000032146	SMARCA4	99	79.952	Macaca_fascicularis
ENSGACG00000016033	-	99	78.443	ENSMMUG00000012042	SMARCA4	97	83.128	Macaca_mulatta
ENSGACG00000016033	-	99	79.758	ENSMNEG00000028512	SMARCA4	99	80.978	Macaca_nemestrina
ENSGACG00000016033	-	99	79.722	ENSMLEG00000034976	SMARCA4	99	80.651	Mandrillus_leucophaeus
ENSGACG00000016033	-	99	79.640	ENSMAMG00000009256	smarca4a	99	80.276	Mastacembelus_armatus
ENSGACG00000016033	-	100	86.265	ENSMAMG00000002841	-	98	88.442	Mastacembelus_armatus
ENSGACG00000016033	-	99	80.170	ENSMZEG00005003889	smarca4a	99	80.480	Maylandia_zebra
ENSGACG00000016033	-	96	86.946	ENSMZEG00005023861	-	98	87.132	Maylandia_zebra
ENSGACG00000016033	-	100	78.060	ENSMAUG00000020731	Smarca4	99	80.602	Mesocricetus_auratus
ENSGACG00000016033	-	99	78.443	ENSMICG00000009806	SMARCA4	99	80.651	Microcebus_murinus
ENSGACG00000016033	-	99	79.114	ENSMOCG00000022209	Smarca4	99	80.410	Microtus_ochrogaster
ENSGACG00000016033	-	99	82.121	ENSMMOG00000008466	-	98	82.028	Mola_mola
ENSGACG00000016033	-	96	80.025	ENSMMOG00000007571	smarca4a	98	79.988	Mola_mola
ENSGACG00000016033	-	81	83.468	ENSMODG00000006287	SMARCA4	99	80.480	Monodelphis_domestica
ENSGACG00000016033	-	95	80.364	ENSMALG00000003388	smarca4a	99	80.589	Monopterus_albus
ENSGACG00000016033	-	91	83.724	ENSMALG00000021534	-	99	84.626	Monopterus_albus
ENSGACG00000016033	-	99	78.204	MGP_CAROLIEiJ_G0031879	Smarca4	100	83.658	Mus_caroli
ENSGACG00000016033	-	99	78.204	ENSMUSG00000032187	Smarca4	99	83.658	Mus_musculus
ENSGACG00000016033	-	99	79.782	MGP_PahariEiJ_G0014745	Smarca4	100	84.050	Mus_pahari
ENSGACG00000016033	-	99	78.204	MGP_SPRETEiJ_G0033003	Smarca4	100	83.658	Mus_spretus
ENSGACG00000016033	-	99	78.323	ENSMPUG00000005711	SMARCA4	99	80.530	Mustela_putorius_furo
ENSGACG00000016033	-	81	82.952	ENSMLUG00000004491	-	99	81.062	Myotis_lucifugus
ENSGACG00000016033	-	99	80.435	ENSNGAG00000021852	Smarca4	99	80.918	Nannospalax_galili
ENSGACG00000016033	-	96	80.114	ENSNBRG00000011457	smarca4a	96	80.528	Neolamprologus_brichardi
ENSGACG00000016033	-	91	84.260	ENSNBRG00000018865	-	99	85.800	Neolamprologus_brichardi
ENSGACG00000016033	-	97	78.697	ENSNLEG00000012389	SMARCA4	96	77.833	Nomascus_leucogenys
ENSGACG00000016033	-	78	86.207	ENSOPRG00000000885	-	77	86.207	Ochotona_princeps
ENSGACG00000016033	-	99	79.543	ENSODEG00000017127	SMARCA4	99	79.052	Octodon_degus
ENSGACG00000016033	-	100	85.480	ENSONIG00000018040	-	100	86.300	Oreochromis_niloticus
ENSGACG00000016033	-	99	80.376	ENSONIG00000008196	smarca4a	99	80.604	Oreochromis_niloticus
ENSGACG00000016033	-	98	76.532	ENSOCUG00000001787	SMARCA4	98	77.036	Oryctolagus_cuniculus
ENSGACG00000016033	-	97	79.202	ENSORLG00000015452	smarca4a	100	79.728	Oryzias_latipes
ENSGACG00000016033	-	97	85.498	ENSORLG00000003955	-	99	85.614	Oryzias_latipes
ENSGACG00000016033	-	97	79.018	ENSORLG00020004611	smarca4a	100	79.728	Oryzias_latipes_hni
ENSGACG00000016033	-	97	85.507	ENSORLG00020009728	-	99	85.506	Oryzias_latipes_hni
ENSGACG00000016033	-	100	84.444	ENSORLG00015007739	-	99	85.146	Oryzias_latipes_hsok
ENSGACG00000016033	-	97	79.018	ENSORLG00015016560	smarca4a	100	79.728	Oryzias_latipes_hsok
ENSGACG00000016033	-	97	84.964	ENSOMEG00000016626	-	99	85.447	Oryzias_melastigma
ENSGACG00000016033	-	100	80.084	ENSOMEG00000007486	smarca4a	100	80.225	Oryzias_melastigma
ENSGACG00000016033	-	73	83.957	ENSOGAG00000016148	SMARCA4	100	80.318	Otolemur_garnettii
ENSGACG00000016033	-	99	78.982	ENSOARG00000017454	SMARCA4	98	80.920	Ovis_aries
ENSGACG00000016033	-	99	78.443	ENSPPAG00000043191	SMARCA4	99	80.651	Pan_paniscus
ENSGACG00000016033	-	99	79.234	ENSPPRG00000000064	SMARCA4	99	80.904	Panthera_pardus
ENSGACG00000016033	-	79	82.701	ENSPTIG00000017447	SMARCA4	99	77.483	Panthera_tigris_altaica
ENSGACG00000016033	-	99	78.443	ENSPTRG00000010488	SMARCA4	99	80.651	Pan_troglodytes
ENSGACG00000016033	-	99	79.819	ENSPANG00000011042	SMARCA4	99	80.334	Papio_anubis
ENSGACG00000016033	-	96	81.049	ENSPKIG00000007770	SMARCA4	99	81.149	Paramormyrops_kingsleyae
ENSGACG00000016033	-	95	82.546	ENSPKIG00000010087	-	99	80.419	Paramormyrops_kingsleyae
ENSGACG00000016033	-	100	77.321	ENSPSIG00000005547	SMARCA4	99	77.590	Pelodiscus_sinensis
ENSGACG00000016033	-	99	79.054	ENSPEMG00000020389	Smarca4	99	80.470	Peromyscus_maniculatus_bairdii
ENSGACG00000016033	-	81	83.001	ENSPCIG00000017138	SMARCA4	99	80.567	Phascolarctos_cinereus
ENSGACG00000016033	-	100	78.728	ENSPFOG00000007892	smarca4a	99	79.014	Poecilia_formosa
ENSGACG00000016033	-	100	84.669	ENSPFOG00000012930	-	99	85.255	Poecilia_formosa
ENSGACG00000016033	-	99	85.036	ENSPLAG00000018616	-	98	86.044	Poecilia_latipinna
ENSGACG00000016033	-	100	77.393	ENSPLAG00000014294	smarca4a	99	78.537	Poecilia_latipinna
ENSGACG00000016033	-	96	85.829	ENSPMEG00000008929	-	97	86.205	Poecilia_mexicana
ENSGACG00000016033	-	96	78.840	ENSPMEG00000003725	smarca4a	97	79.643	Poecilia_mexicana
ENSGACG00000016033	-	96	86.207	ENSPREG00000014823	-	97	86.581	Poecilia_reticulata
ENSGACG00000016033	-	99	77.825	ENSPREG00000014608	smarca4a	99	78.727	Poecilia_reticulata
ENSGACG00000016033	-	99	79.234	ENSPPYG00000009568	SMARCA4	99	80.843	Pongo_abelii
ENSGACG00000016033	-	59	74.017	ENSPCAG00000014054	SMARCA4	77	71.216	Procavia_capensis
ENSGACG00000016033	-	100	78.238	ENSPCOG00000023011	SMARCA4	99	80.651	Propithecus_coquereli
ENSGACG00000016033	-	94	72.760	ENSPVAG00000007787	SMARCA4	94	77.473	Pteropus_vampyrus
ENSGACG00000016033	-	96	81.273	ENSPNYG00000000717	smarca4a	97	81.728	Pundamilia_nyererei
ENSGACG00000016033	-	96	85.019	ENSPNYG00000023995	-	98	85.849	Pundamilia_nyererei
ENSGACG00000016033	-	97	75.890	ENSPNAG00000024136	smarca4a	98	77.396	Pygocentrus_nattereri
ENSGACG00000016033	-	96	83.636	ENSPNAG00000006636	-	97	83.468	Pygocentrus_nattereri
ENSGACG00000016033	-	99	78.263	ENSRNOG00000009271	Smarca4	99	80.470	Rattus_norvegicus
ENSGACG00000016033	-	99	77.469	ENSRBIG00000038696	SMARCA4	99	79.893	Rhinopithecus_bieti
ENSGACG00000016033	-	99	78.443	ENSRROG00000045509	SMARCA4	99	80.651	Rhinopithecus_roxellana
ENSGACG00000016033	-	99	78.862	ENSSBOG00000026896	SMARCA4	99	80.651	Saimiri_boliviensis_boliviensis
ENSGACG00000016033	-	81	83.075	ENSSHAG00000001642	SMARCA4	99	80.447	Sarcophilus_harrisii
ENSGACG00000016033	-	96	79.239	ENSSFOG00015009921	-	83	84.482	Scleropages_formosus
ENSGACG00000016033	-	99	80.574	ENSSFOG00015013823	smarca4	99	80.346	Scleropages_formosus
ENSGACG00000016033	-	99	79.781	ENSSMAG00000003200	smarca4a	99	79.604	Scophthalmus_maximus
ENSGACG00000016033	-	100	85.446	ENSSMAG00000014082	-	99	85.974	Scophthalmus_maximus
ENSGACG00000016033	-	95	76.235	ENSSDUG00000017298	smarca4a	99	76.446	Seriola_dumerili
ENSGACG00000016033	-	99	88.492	ENSSDUG00000005388	-	99	88.081	Seriola_dumerili
ENSGACG00000016033	-	99	79.964	ENSSLDG00000024486	smarca4a	99	80.432	Seriola_lalandi_dorsalis
ENSGACG00000016033	-	96	88.391	ENSSLDG00000023663	-	97	89.454	Seriola_lalandi_dorsalis
ENSGACG00000016033	-	62	94.410	ENSSARG00000013477	SMARCA4	83	94.410	Sorex_araneus
ENSGACG00000016033	-	96	78.805	ENSSPUG00000004558	SMARCA4	98	78.862	Sphenodon_punctatus
ENSGACG00000016033	-	99	79.604	ENSSPAG00000004248	smarca4a	99	80.072	Stegastes_partitus
ENSGACG00000016033	-	100	85.814	ENSSPAG00000012533	-	99	86.744	Stegastes_partitus
ENSGACG00000016033	-	99	78.503	ENSSSCG00000013629	SMARCA4	99	80.711	Sus_scrofa
ENSGACG00000016033	-	51	84.716	ENSTGUG00000015488	-	99	84.716	Taeniopygia_guttata
ENSGACG00000016033	-	91	76.587	ENSTRUG00000004885	smarca4a	99	77.198	Takifugu_rubripes
ENSGACG00000016033	-	96	84.592	ENSTRUG00000001378	SMARCA4	98	85.037	Takifugu_rubripes
ENSGACG00000016033	-	100	86.595	ENSTNIG00000004536	SMARCA4	100	87.081	Tetraodon_nigroviridis
ENSGACG00000016033	-	75	80.926	ENSTNIG00000004859	-	100	80.659	Tetraodon_nigroviridis
ENSGACG00000016033	-	50	98.649	ENSTBEG00000000707	-	52	98.571	Tupaia_belangeri
ENSGACG00000016033	-	99	79.758	ENSTTRG00000009519	SMARCA4	99	80.314	Tursiops_truncatus
ENSGACG00000016033	-	99	78.383	ENSUAMG00000014661	SMARCA4	99	80.591	Ursus_americanus
ENSGACG00000016033	-	97	77.736	ENSUMAG00000022005	SMARCA4	98	84.203	Ursus_maritimus
ENSGACG00000016033	-	99	78.323	ENSVVUG00000017820	SMARCA4	96	80.591	Vulpes_vulpes
ENSGACG00000016033	-	99	79.446	ENSXETG00000009355	smarca4	99	79.424	Xenopus_tropicalis
ENSGACG00000016033	-	100	84.426	ENSXMAG00000007030	-	99	85.539	Xiphophorus_maculatus
ENSGACG00000016033	-	100	77.897	ENSXMAG00000006321	smarca4a	99	78.448	Xiphophorus_maculatus