EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000016087 (Gene tree)
Gene ID: -
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3079 bases
Position: chrgroupIX:1407504-1410582
Accession: ZDB-GENE-050522-251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000021225	RNA_pol_I_A49	PF06870.12	1.1e-106	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000021266	-	1332	-	ENSGACP00000021225	419 (aa)	-	G3PUD8

Gene Model

Click here to download ENSGACG00000016087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016087	polr1e	98	43.171	ENSG00000137054	POLR1E	97	43.171	Homo_sapiens
ENSGACG00000016087	polr1e	100	65.632	ENSAPOG00000012452	polr1e	100	65.632	Acanthochromis_polyacanthus
ENSGACG00000016087	polr1e	98	38.261	ENSAMEG00000010193	POLR1E	94	38.261	Ailuropoda_melanoleuca
ENSGACG00000016087	polr1e	100	61.814	ENSACIG00000009884	polr1e	99	64.394	Amphilophus_citrinellus
ENSGACG00000016087	polr1e	100	71.122	ENSAOCG00000005665	polr1e	100	71.122	Amphiprion_ocellaris
ENSGACG00000016087	polr1e	100	71.360	ENSAPEG00000020581	polr1e	100	71.360	Amphiprion_percula
ENSGACG00000016087	polr1e	100	71.838	ENSATEG00000020609	polr1e	100	71.838	Anabas_testudineus
ENSGACG00000016087	polr1e	81	38.402	ENSAPLG00000010340	POLR1E	100	38.402	Anas_platyrhynchos
ENSGACG00000016087	polr1e	99	43.269	ENSANAG00000038046	POLR1E	98	43.269	Aotus_nancymaae
ENSGACG00000016087	polr1e	100	70.406	ENSACLG00000013685	polr1e	99	70.406	Astatotilapia_calliptera
ENSGACG00000016087	polr1e	99	54.785	ENSAMXG00000018181	polr1e	99	54.785	Astyanax_mexicanus
ENSGACG00000016087	polr1e	98	43.552	ENSBTAG00000012243	POLR1E	97	43.552	Bos_taurus
ENSGACG00000016087	polr1e	92	44.730	ENSCJAG00000010512	POLR1E	95	44.730	Callithrix_jacchus
ENSGACG00000016087	polr1e	99	41.487	ENSCAFG00000002377	POLR1E	98	41.487	Canis_familiaris
ENSGACG00000016087	polr1e	99	41.247	ENSCAFG00020017851	POLR1E	98	41.247	Canis_lupus_dingo
ENSGACG00000016087	polr1e	98	43.309	ENSCHIG00000019479	POLR1E	97	43.309	Capra_hircus
ENSGACG00000016087	polr1e	99	43.571	ENSTSYG00000002075	POLR1E	98	43.571	Carlito_syrichta
ENSGACG00000016087	polr1e	70	40.476	ENSCAPG00000015653	POLR1E	99	40.476	Cavia_aperea
ENSGACG00000016087	polr1e	98	42.336	ENSCPOG00000009965	POLR1E	97	42.336	Cavia_porcellus
ENSGACG00000016087	polr1e	99	39.904	ENSCCAG00000029460	POLR1E	98	39.904	Cebus_capucinus
ENSGACG00000016087	polr1e	98	43.415	ENSCATG00000031732	POLR1E	96	48.077	Cercocebus_atys
ENSGACG00000016087	polr1e	87	43.869	ENSCLAG00000012701	POLR1E	95	43.869	Chinchilla_lanigera
ENSGACG00000016087	polr1e	98	43.415	ENSCSAG00000010782	POLR1E	97	43.415	Chlorocebus_sabaeus
ENSGACG00000016087	polr1e	95	36.160	ENSCHOG00000013024	POLR1E	83	36.160	Choloepus_hoffmanni
ENSGACG00000016087	polr1e	99	41.905	ENSCPBG00000006923	POLR1E	99	42.280	Chrysemys_picta_bellii
ENSGACG00000016087	polr1e	98	43.902	ENSCANG00000036112	POLR1E	96	50.000	Colobus_angolensis_palliatus
ENSGACG00000016087	polr1e	99	40.380	ENSCGRG00001006197	Polr1e	95	40.380	Cricetulus_griseus_chok1gshd
ENSGACG00000016087	polr1e	99	39.905	ENSCGRG00000006430	Polr1e	95	39.905	Cricetulus_griseus_crigri
ENSGACG00000016087	polr1e	99	62.440	ENSCSEG00000005121	polr1e	99	62.440	Cynoglossus_semilaevis
ENSGACG00000016087	polr1e	100	67.780	ENSCVAG00000019759	polr1e	100	67.780	Cyprinodon_variegatus
ENSGACG00000016087	polr1e	97	54.300	ENSDARG00000006434	polr1e	100	53.938	Danio_rerio
ENSGACG00000016087	polr1e	99	37.554	ENSDNOG00000010257	POLR1E	98	36.695	Dasypus_novemcinctus
ENSGACG00000016087	polr1e	76	42.188	ENSETEG00000018204	POLR1E	88	42.812	Echinops_telfairi
ENSGACG00000016087	polr1e	99	42.926	ENSEASG00005000675	POLR1E	98	42.926	Equus_asinus_asinus
ENSGACG00000016087	polr1e	99	42.686	ENSECAG00000014669	POLR1E	98	42.686	Equus_caballus
ENSGACG00000016087	polr1e	95	36.000	ENSEEUG00000011928	POLR1E	84	36.000	Erinaceus_europaeus
ENSGACG00000016087	polr1e	99	65.072	ENSELUG00000008150	polr1e	99	65.072	Esox_lucius
ENSGACG00000016087	polr1e	99	42.105	ENSFCAG00000013081	POLR1E	98	42.105	Felis_catus
ENSGACG00000016087	polr1e	95	41.832	ENSFALG00000012950	POLR1E	99	41.832	Ficedula_albicollis
ENSGACG00000016087	polr1e	98	43.614	ENSFDAG00000016917	POLR1E	97	43.614	Fukomys_damarensis
ENSGACG00000016087	polr1e	100	69.451	ENSFHEG00000009801	polr1e	100	69.451	Fundulus_heteroclitus
ENSGACG00000016087	polr1e	99	51.544	ENSGMOG00000003336	POLR1E	99	51.544	Gadus_morhua
ENSGACG00000016087	polr1e	99	41.135	ENSGALG00000005395	POLR1E	99	41.135	Gallus_gallus
ENSGACG00000016087	polr1e	100	68.258	ENSGAFG00000004850	polr1e	100	68.258	Gambusia_affinis
ENSGACG00000016087	polr1e	97	39.120	ENSGAGG00000001659	POLR1E	99	38.902	Gopherus_agassizii
ENSGACG00000016087	polr1e	99	42.721	ENSGGOG00000001882	POLR1E	99	46.018	Gorilla_gorilla
ENSGACG00000016087	polr1e	100	70.167	ENSHBUG00000002559	polr1e	99	70.167	Haplochromis_burtoni
ENSGACG00000016087	polr1e	98	43.659	ENSHGLG00000002036	POLR1E	97	43.659	Heterocephalus_glaber_female
ENSGACG00000016087	polr1e	98	43.902	ENSHGLG00100012784	POLR1E	97	43.902	Heterocephalus_glaber_male
ENSGACG00000016087	polr1e	100	66.110	ENSHCOG00000002774	polr1e	100	66.110	Hippocampus_comes
ENSGACG00000016087	polr1e	99	52.392	ENSIPUG00000003019	polr1e	99	52.392	Ictalurus_punctatus
ENSGACG00000016087	polr1e	99	41.429	ENSSTOG00000009810	POLR1E	99	41.429	Ictidomys_tridecemlineatus
ENSGACG00000016087	polr1e	98	42.892	ENSJJAG00000020731	Polr1e	93	42.892	Jaculus_jaculus
ENSGACG00000016087	polr1e	100	69.928	ENSKMAG00000000046	polr1e	100	69.928	Kryptolebias_marmoratus
ENSGACG00000016087	polr1e	99	70.335	ENSLBEG00000003104	polr1e	99	70.813	Labrus_bergylta
ENSGACG00000016087	polr1e	86	47.814	ENSLACG00000003416	POLR1E	99	47.814	Latimeria_chalumnae
ENSGACG00000016087	polr1e	99	49.165	ENSLOCG00000012859	polr1e	99	49.165	Lepisosteus_oculatus
ENSGACG00000016087	polr1e	99	42.482	ENSLAFG00000012831	POLR1E	98	42.482	Loxodonta_africana
ENSGACG00000016087	polr1e	98	43.796	ENSMFAG00000045465	POLR1E	96	48.077	Macaca_fascicularis
ENSGACG00000016087	polr1e	98	43.415	ENSMMUG00000017892	POLR1E	96	48.077	Macaca_mulatta
ENSGACG00000016087	polr1e	98	40.380	ENSMNEG00000040283	POLR1E	95	42.424	Macaca_nemestrina
ENSGACG00000016087	polr1e	98	43.415	ENSMLEG00000031135	POLR1E	96	48.077	Mandrillus_leucophaeus
ENSGACG00000016087	polr1e	99	70.574	ENSMAMG00000001260	polr1e	99	70.574	Mastacembelus_armatus
ENSGACG00000016087	polr1e	100	70.167	ENSMZEG00005021536	polr1e	99	70.167	Maylandia_zebra
ENSGACG00000016087	polr1e	98	41.546	ENSMAUG00000021044	Polr1e	93	41.546	Mesocricetus_auratus
ENSGACG00000016087	polr1e	99	42.926	ENSMICG00000003673	POLR1E	98	42.926	Microcebus_murinus
ENSGACG00000016087	polr1e	98	40.241	ENSMOCG00000012920	Polr1e	94	40.241	Microtus_ochrogaster
ENSGACG00000016087	polr1e	100	70.476	ENSMMOG00000007391	polr1e	100	70.476	Mola_mola
ENSGACG00000016087	polr1e	96	42.469	ENSMODG00000002884	POLR1E	98	42.469	Monodelphis_domestica
ENSGACG00000016087	polr1e	100	69.928	ENSMALG00000002665	polr1e	99	69.928	Monopterus_albus
ENSGACG00000016087	polr1e	99	40.521	MGP_CAROLIEiJ_G0025967	Polr1e	98	40.247	Mus_caroli
ENSGACG00000016087	polr1e	99	41.093	ENSMUSG00000028318	Polr1e	97	40.988	Mus_musculus
ENSGACG00000016087	polr1e	99	43.262	MGP_PahariEiJ_G0024114	Polr1e	98	43.243	Mus_pahari
ENSGACG00000016087	polr1e	99	41.568	MGP_SPRETEiJ_G0026930	Polr1e	98	41.481	Mus_spretus
ENSGACG00000016087	polr1e	99	37.901	ENSMPUG00000006040	POLR1E	98	34.968	Mustela_putorius_furo
ENSGACG00000016087	polr1e	99	44.125	ENSMLUG00000012688	POLR1E	95	44.125	Myotis_lucifugus
ENSGACG00000016087	polr1e	98	42.754	ENSNGAG00000002520	Polr1e	93	42.754	Nannospalax_galili
ENSGACG00000016087	polr1e	100	70.406	ENSNBRG00000016822	polr1e	99	70.406	Neolamprologus_brichardi
ENSGACG00000016087	polr1e	98	43.796	ENSNLEG00000003616	POLR1E	96	48.077	Nomascus_leucogenys
ENSGACG00000016087	polr1e	73	45.982	ENSMEUG00000015372	-	80	45.575	Notamacropus_eugenii
ENSGACG00000016087	polr1e	86	37.705	ENSOPRG00000014206	POLR1E	99	37.705	Ochotona_princeps
ENSGACG00000016087	polr1e	98	43.552	ENSODEG00000014565	POLR1E	94	43.552	Octodon_degus
ENSGACG00000016087	polr1e	100	70.167	ENSONIG00000008921	polr1e	99	70.167	Oreochromis_niloticus
ENSGACG00000016087	polr1e	99	42.344	ENSOCUG00000024773	POLR1E	98	42.823	Oryctolagus_cuniculus
ENSGACG00000016087	polr1e	100	67.542	ENSORLG00000005143	polr1e	100	67.542	Oryzias_latipes
ENSGACG00000016087	polr1e	93	64.194	ENSORLG00020007271	polr1e	99	64.194	Oryzias_latipes_hni
ENSGACG00000016087	polr1e	100	67.780	ENSORLG00015000137	polr1e	100	67.780	Oryzias_latipes_hsok
ENSGACG00000016087	polr1e	100	65.394	ENSOMEG00000013264	polr1e	98	65.394	Oryzias_melastigma
ENSGACG00000016087	polr1e	99	41.727	ENSOGAG00000012981	POLR1E	96	41.727	Otolemur_garnettii
ENSGACG00000016087	polr1e	98	43.309	ENSOARG00000011465	POLR1E	93	43.309	Ovis_aries
ENSGACG00000016087	polr1e	98	43.171	ENSPPAG00000034566	POLR1E	96	48.077	Pan_paniscus
ENSGACG00000016087	polr1e	99	42.105	ENSPPRG00000005649	POLR1E	98	42.105	Panthera_pardus
ENSGACG00000016087	polr1e	99	42.105	ENSPTIG00000009774	POLR1E	98	42.105	Panthera_tigris_altaica
ENSGACG00000016087	polr1e	98	43.171	ENSPTRG00000020944	POLR1E	96	48.077	Pan_troglodytes
ENSGACG00000016087	polr1e	98	43.415	ENSPANG00000025563	POLR1E	96	48.077	Papio_anubis
ENSGACG00000016087	polr1e	99	52.257	ENSPKIG00000003562	polr1e	99	52.257	Paramormyrops_kingsleyae
ENSGACG00000016087	polr1e	98	39.709	ENSPSIG00000003274	POLR1E	95	40.194	Pelodiscus_sinensis
ENSGACG00000016087	polr1e	95	62.406	ENSPMGG00000024169	polr1e	96	62.406	Periophthalmus_magnuspinnatus
ENSGACG00000016087	polr1e	99	40.618	ENSPEMG00000019151	-	95	40.618	Peromyscus_maniculatus_bairdii
ENSGACG00000016087	polr1e	99	33.732	ENSPEMG00000022300	-	94	33.732	Peromyscus_maniculatus_bairdii
ENSGACG00000016087	polr1e	96	42.963	ENSPCIG00000014798	POLR1E	98	42.963	Phascolarctos_cinereus
ENSGACG00000016087	polr1e	100	63.801	ENSPFOG00000019627	polr1e	99	63.801	Poecilia_formosa
ENSGACG00000016087	polr1e	100	67.303	ENSPLAG00000022679	polr1e	100	67.303	Poecilia_latipinna
ENSGACG00000016087	polr1e	86	67.956	ENSPMEG00000022123	polr1e	93	67.956	Poecilia_mexicana
ENSGACG00000016087	polr1e	100	67.303	ENSPREG00000009470	polr1e	100	67.303	Poecilia_reticulata
ENSGACG00000016087	polr1e	98	42.822	ENSPPYG00000019061	POLR1E	97	42.822	Pongo_abelii
ENSGACG00000016087	polr1e	58	37.190	ENSPCAG00000004891	POLR1E	77	37.190	Procavia_capensis
ENSGACG00000016087	polr1e	99	42.446	ENSPCOG00000027448	POLR1E	98	42.446	Propithecus_coquereli
ENSGACG00000016087	polr1e	96	41.089	ENSPVAG00000007940	POLR1E	84	41.089	Pteropus_vampyrus
ENSGACG00000016087	polr1e	100	70.644	ENSPNYG00000001032	polr1e	99	70.644	Pundamilia_nyererei
ENSGACG00000016087	polr1e	99	52.745	ENSPNAG00000006987	polr1e	99	52.745	Pygocentrus_nattereri
ENSGACG00000016087	polr1e	98	40.876	ENSRNOG00000012664	Polr1e	93	40.876	Rattus_norvegicus
ENSGACG00000016087	polr1e	95	43.250	ENSRBIG00000034214	POLR1E	99	43.455	Rhinopithecus_bieti
ENSGACG00000016087	polr1e	98	43.415	ENSRROG00000031986	POLR1E	96	48.077	Rhinopithecus_roxellana
ENSGACG00000016087	polr1e	98	43.171	ENSSBOG00000021415	POLR1E	97	43.171	Saimiri_boliviensis_boliviensis
ENSGACG00000016087	polr1e	83	43.626	ENSSHAG00000016084	POLR1E	96	43.626	Sarcophilus_harrisii
ENSGACG00000016087	polr1e	99	53.461	ENSSFOG00015002293	polr1e	99	53.461	Scleropages_formosus
ENSGACG00000016087	polr1e	99	70.335	ENSSMAG00000011672	polr1e	93	70.335	Scophthalmus_maximus
ENSGACG00000016087	polr1e	100	71.599	ENSSDUG00000022279	polr1e	99	71.599	Seriola_dumerili
ENSGACG00000016087	polr1e	100	71.360	ENSSLDG00000024918	polr1e	99	71.360	Seriola_lalandi_dorsalis
ENSGACG00000016087	polr1e	56	36.752	ENSSARG00000009810	-	58	37.607	Sorex_araneus
ENSGACG00000016087	polr1e	100	41.274	ENSSPUG00000009499	POLR1E	100	41.274	Sphenodon_punctatus
ENSGACG00000016087	polr1e	100	71.122	ENSSPAG00000021240	polr1e	100	71.122	Stegastes_partitus
ENSGACG00000016087	polr1e	99	41.007	ENSSSCG00000005347	POLR1E	98	41.007	Sus_scrofa
ENSGACG00000016087	polr1e	95	37.333	ENSTGUG00000007169	POLR1E	100	37.333	Taeniopygia_guttata
ENSGACG00000016087	polr1e	99	66.508	ENSTRUG00000020779	polr1e	99	66.580	Takifugu_rubripes
ENSGACG00000016087	polr1e	99	66.826	ENSTNIG00000017812	polr1e	99	66.826	Tetraodon_nigroviridis
ENSGACG00000016087	polr1e	95	42.500	ENSTBEG00000013786	POLR1E	84	42.500	Tupaia_belangeri
ENSGACG00000016087	polr1e	95	41.439	ENSTTRG00000008294	POLR1E	85	41.439	Tursiops_truncatus
ENSGACG00000016087	polr1e	99	42.143	ENSUAMG00000012474	POLR1E	98	43.869	Ursus_americanus
ENSGACG00000016087	polr1e	99	42.143	ENSUMAG00000011496	POLR1E	98	42.143	Ursus_maritimus
ENSGACG00000016087	polr1e	86	38.462	ENSVPAG00000009048	POLR1E	83	38.462	Vicugna_pacos
ENSGACG00000016087	polr1e	98	41.606	ENSVVUG00000019954	POLR1E	97	41.606	Vulpes_vulpes
ENSGACG00000016087	polr1e	99	38.208	ENSXETG00000006533	polr1e	99	38.208	Xenopus_tropicalis
ENSGACG00000016087	polr1e	100	65.155	ENSXCOG00000013706	polr1e	100	65.155	Xiphophorus_couchianus
ENSGACG00000016087	polr1e	100	68.974	ENSXMAG00000012484	polr1e	100	68.974	Xiphophorus_maculatus