EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000016164 (Gene tree)
Gene ID: -
Gene Symbol: rab4a
Alias: fc93b03|wu:fc93b03
Full Name: RAB4a%2C member RAS oncogene family
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2931 bases
Position: chrgroupII:13629258-13632188
Accession: ZDB-GENE-040525-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000021327	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000021368	-	839	-	ENSGACP00000021327	219 (aa)	-	G3PUP0

Gene Model

Click here to download ENSGACG00000016164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016164's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000016164	rab4a	80	34.463	ENSGACG00000004844	rras	94	34.463
ENSGACG00000016164	rab4a	81	45.506	ENSGACG00000012006	rab30	89	45.506
ENSGACG00000016164	rab4a	79	43.605	ENSGACG00000018847	-	76	43.605
ENSGACG00000016164	rab4a	84	30.319	ENSGACG00000016680	rheb	94	30.319
ENSGACG00000016164	rab4a	79	36.158	ENSGACG00000015457	dnajc27	73	37.736
ENSGACG00000016164	rab4a	74	30.864	ENSGACG00000015645	rras2	88	31.852
ENSGACG00000016164	rab4a	79	52.326	ENSGACG00000013297	-	76	52.326
ENSGACG00000016164	rab4a	87	45.550	ENSGACG00000000789	rab1ba	88	45.550
ENSGACG00000016164	rab4a	80	40.000	ENSGACG00000005979	RAB15	84	40.000
ENSGACG00000016164	rab4a	70	37.179	ENSGACG00000005397	si:ch211-247i17.1	89	37.179
ENSGACG00000016164	rab4a	74	42.593	ENSGACG00000008659	rab5c	89	39.320
ENSGACG00000016164	rab4a	88	41.538	ENSGACG00000001950	RAB39B	90	41.538
ENSGACG00000016164	rab4a	73	33.750	ENSGACG00000006151	rab23	76	33.333
ENSGACG00000016164	rab4a	99	41.667	ENSGACG00000019642	-	100	42.056
ENSGACG00000016164	rab4a	81	48.023	ENSGACG00000013249	rab25b	84	48.023
ENSGACG00000016164	rab4a	79	53.488	ENSGACG00000015479	rab11bb	77	53.488
ENSGACG00000016164	rab4a	81	59.322	ENSGACG00000014905	rab2a	82	59.322
ENSGACG00000016164	rab4a	75	35.714	ENSGACG00000014578	RAB9A	84	35.714
ENSGACG00000016164	rab4a	84	43.243	ENSGACG00000001694	rab18a	87	43.243
ENSGACG00000016164	rab4a	53	31.092	ENSGACG00000004052	arl8	63	31.092
ENSGACG00000016164	rab4a	82	37.158	ENSGACG00000009647	RAB7A	88	37.158
ENSGACG00000016164	rab4a	94	36.715	ENSGACG00000006162	-	90	36.715
ENSGACG00000016164	rab4a	74	39.506	ENSGACG00000005608	rab22a	83	39.506
ENSGACG00000016164	rab4a	77	34.463	ENSGACG00000020514	rab34b	68	34.463
ENSGACG00000016164	rab4a	81	45.763	ENSGACG00000003864	rab1ab	87	45.763
ENSGACG00000016164	rab4a	74	35.714	ENSGACG00000001725	zgc:101559	72	35.714
ENSGACG00000016164	rab4a	95	31.604	ENSGACG00000011607	rab32b	91	31.604
ENSGACG00000016164	rab4a	77	42.857	ENSGACG00000019767	-	84	42.857
ENSGACG00000016164	rab4a	74	34.940	ENSGACG00000019134	si:cabz01085950.1	81	34.940
ENSGACG00000016164	rab4a	74	30.061	ENSGACG00000012474	rabl2	71	30.061
ENSGACG00000016164	rab4a	79	43.931	ENSGACG00000011925	rab13	85	43.931
ENSGACG00000016164	rab4a	82	43.575	ENSGACG00000013401	zgc:171927	88	44.318
ENSGACG00000016164	rab4a	74	34.545	ENSGACG00000019540	rab33ba	75	34.545
ENSGACG00000016164	rab4a	75	36.310	ENSGACG00000003972	rab9a	82	36.310
ENSGACG00000016164	rab4a	92	31.731	ENSGACG00000011190	rab34a	77	31.731
ENSGACG00000016164	rab4a	80	38.068	ENSGACG00000017153	rab41	83	38.068
ENSGACG00000016164	rab4a	80	50.568	ENSGACG00000013259	rab11al	81	50.568
ENSGACG00000016164	rab4a	80	37.500	ENSGACG00000013721	rab6bb	84	37.500
ENSGACG00000016164	rab4a	77	39.884	ENSGACG00000020356	rab6a	82	40.116
ENSGACG00000016164	rab4a	76	64.671	ENSGACG00000016799	-	97	64.671
ENSGACG00000016164	rab4a	84	40.000	ENSGACG00000014915	si:dkey-16l2.16	80	40.000
ENSGACG00000016164	rab4a	53	31.933	ENSGACG00000009321	arl5c	63	31.933
ENSGACG00000016164	rab4a	70	30.319	ENSGACG00000003527	rab20	79	30.319
ENSGACG00000016164	rab4a	74	43.558	ENSGACG00000013548	rab35b	80	43.558
ENSGACG00000016164	rab4a	79	41.618	ENSGACG00000004997	rab5aa	79	41.618
ENSGACG00000016164	rab4a	83	33.871	ENSGACG00000010473	RAB29	88	33.871
ENSGACG00000016164	rab4a	79	32.584	ENSGACG00000011661	kras	91	32.584
ENSGACG00000016164	rab4a	82	37.158	ENSGACG00000000807	-	89	37.158
ENSGACG00000016164	rab4a	89	43.147	ENSGACG00000016395	rab18b	92	43.147
ENSGACG00000016164	rab4a	98	38.889	ENSGACG00000020437	-	100	38.889
ENSGACG00000016164	rab4a	73	38.554	ENSGACG00000003726	rab6ba	77	38.554
ENSGACG00000016164	rab4a	75	37.427	ENSGACG00000018291	rab9b	83	37.427
ENSGACG00000016164	rab4a	73	37.576	ENSGACG00000018745	rab33a	70	37.576
ENSGACG00000016164	rab4a	78	32.222	ENSGACG00000011340	hrasb	86	32.222
ENSGACG00000016164	rab4a	92	35.784	ENSGACG00000016639	rab12	82	37.989
ENSGACG00000016164	rab4a	81	35.484	ENSGACG00000014678	rab36	70	35.484
ENSGACG00000016164	rab4a	70	33.333	ENSGACG00000000729	rhebl1	83	33.333
ENSGACG00000016164	rab4a	97	42.925	ENSGACG00000004965	rab25a	98	42.925
ENSGACG00000016164	rab4a	90	38.579	ENSGACG00000007722	rab15	95	40.506
ENSGACG00000016164	rab4a	78	36.932	ENSGACG00000013611	-	86	36.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016164	rab4a	98	97.664	ENSCVAG00000010727	rab4a	100	97.664	Cyprinodon_variegatus
ENSGACG00000016164	rab4a	98	94.393	ENSELUG00000014785	rab4a	100	94.393	Esox_lucius
ENSGACG00000016164	rab4a	98	97.664	ENSFHEG00000010509	rab4a	100	97.664	Fundulus_heteroclitus
ENSGACG00000016164	rab4a	98	97.196	ENSGAFG00000005477	rab4a	100	97.196	Gambusia_affinis
ENSGACG00000016164	rab4a	98	97.664	ENSKMAG00000020250	rab4a	100	97.664	Kryptolebias_marmoratus
ENSGACG00000016164	rab4a	98	99.065	ENSLBEG00000003101	rab4a	100	99.065	Labrus_bergylta
ENSGACG00000016164	rab4a	98	97.196	ENSMMOG00000015287	rab4a	100	97.196	Mola_mola
ENSGACG00000016164	rab4a	98	97.196	ENSPFOG00000014630	rab4a	100	97.196	Poecilia_formosa
ENSGACG00000016164	rab4a	98	97.196	ENSPLAG00000014563	rab4a	100	97.196	Poecilia_latipinna
ENSGACG00000016164	rab4a	98	97.196	ENSPMEG00000012205	rab4a	100	97.196	Poecilia_mexicana
ENSGACG00000016164	rab4a	98	97.196	ENSPREG00000010154	rab4a	100	97.196	Poecilia_reticulata
ENSGACG00000016164	rab4a	98	94.393	ENSSFOG00015015336	rab4a	100	94.393	Scleropages_formosus
ENSGACG00000016164	rab4a	98	97.196	ENSXMAG00000026193	rab4a	100	97.196	Xiphophorus_maculatus