EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000016179 (Gene tree)
Gene ID: -
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 10544 bases
Position: chrgroupII:13658496-13669039
Accession: ZDB-GENE-030131-2621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000021350	Urb2	PF10441.9	9.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000021391	-	4551	-	ENSGACP00000021350	1516 (aa)	-	G3PUR3

Gene Model

Click here to download ENSGACG00000016179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016179	urb2	99	38.160	ENSG00000135763	URB2	99	63.095	Homo_sapiens
ENSGACG00000016179	urb2	89	69.321	ENSAPOG00000000608	urb2	95	69.391	Acanthochromis_polyacanthus
ENSGACG00000016179	urb2	100	37.516	ENSAMEG00000009206	URB2	100	37.452	Ailuropoda_melanoleuca
ENSGACG00000016179	urb2	100	67.086	ENSAOCG00000019961	urb2	100	67.206	Amphiprion_ocellaris
ENSGACG00000016179	urb2	100	67.146	ENSAPEG00000005263	urb2	100	67.266	Amphiprion_percula
ENSGACG00000016179	urb2	100	66.352	ENSATEG00000020930	urb2	100	65.487	Anabas_testudineus
ENSGACG00000016179	urb2	97	38.235	ENSAPLG00000002998	URB2	99	37.974	Anas_platyrhynchos
ENSGACG00000016179	urb2	99	39.541	ENSACAG00000001285	URB2	99	39.541	Anolis_carolinensis
ENSGACG00000016179	urb2	99	37.967	ENSANAG00000033963	URB2	99	37.838	Aotus_nancymaae
ENSGACG00000016179	urb2	89	65.700	ENSACLG00000009254	urb2	95	65.769	Astatotilapia_calliptera
ENSGACG00000016179	urb2	99	42.985	ENSAMXG00000003474	urb2	99	43.177	Astyanax_mexicanus
ENSGACG00000016179	urb2	100	37.317	ENSBTAG00000010180	URB2	100	37.190	Bos_taurus
ENSGACG00000016179	urb2	95	62.411	ENSCJAG00000010968	URB2	99	62.411	Callithrix_jacchus
ENSGACG00000016179	urb2	99	36.404	ENSCAFG00000012118	URB2	99	36.346	Canis_familiaris
ENSGACG00000016179	urb2	93	34.973	ENSCAFG00020027217	URB2	99	34.908	Canis_lupus_dingo
ENSGACG00000016179	urb2	100	37.397	ENSCHIG00000014513	URB2	100	37.270	Capra_hircus
ENSGACG00000016179	urb2	100	37.684	ENSTSYG00000006924	URB2	100	37.620	Carlito_syrichta
ENSGACG00000016179	urb2	62	46.605	ENSCPOG00000020777	-	99	46.296	Cavia_porcellus
ENSGACG00000016179	urb2	99	38.135	ENSCCAG00000023932	URB2	99	38.006	Cebus_capucinus
ENSGACG00000016179	urb2	99	38.343	ENSCATG00000043366	URB2	99	38.215	Cercocebus_atys
ENSGACG00000016179	urb2	99	38.447	ENSCLAG00000006268	URB2	99	38.318	Chinchilla_lanigera
ENSGACG00000016179	urb2	99	38.215	ENSCSAG00000010599	URB2	99	38.086	Chlorocebus_sabaeus
ENSGACG00000016179	urb2	64	55.455	ENSCHOG00000010163	URB2	64	55.455	Choloepus_hoffmanni
ENSGACG00000016179	urb2	99	40.428	ENSCPBG00000006191	URB2	99	40.239	Chrysemys_picta_bellii
ENSGACG00000016179	urb2	99	38.215	ENSCANG00000023711	URB2	99	38.071	Colobus_angolensis_palliatus
ENSGACG00000016179	urb2	99	36.876	ENSCGRG00001009591	Urb2	99	36.748	Cricetulus_griseus_chok1gshd
ENSGACG00000016179	urb2	99	36.876	ENSCGRG00000011259	Urb2	99	36.748	Cricetulus_griseus_crigri
ENSGACG00000016179	urb2	100	53.353	ENSCSEG00000000299	urb2	100	53.410	Cynoglossus_semilaevis
ENSGACG00000016179	urb2	100	59.655	ENSCVAG00000011011	urb2	100	59.778	Cyprinodon_variegatus
ENSGACG00000016179	urb2	100	45.327	ENSDARG00000003217	urb2	100	71.154	Danio_rerio
ENSGACG00000016179	urb2	65	34.975	ENSDNOG00000043064	URB2	99	35.128	Dasypus_novemcinctus
ENSGACG00000016179	urb2	99	36.100	ENSDORG00000014975	Urb2	99	35.972	Dipodomys_ordii
ENSGACG00000016179	urb2	95	40.845	ENSETEG00000002869	URB2	95	40.845	Echinops_telfairi
ENSGACG00000016179	urb2	100	36.741	ENSEASG00005012060	URB2	100	36.677	Equus_asinus_asinus
ENSGACG00000016179	urb2	93	62.937	ENSECAG00000012338	URB2	100	62.937	Equus_caballus
ENSGACG00000016179	urb2	91	57.343	ENSEEUG00000002669	URB2	91	57.343	Erinaceus_europaeus
ENSGACG00000016179	urb2	100	51.757	ENSELUG00000014647	urb2	100	51.821	Esox_lucius
ENSGACG00000016179	urb2	99	37.037	ENSFCAG00000007662	URB2	99	37.061	Felis_catus
ENSGACG00000016179	urb2	99	39.630	ENSFALG00000003385	URB2	99	39.502	Ficedula_albicollis
ENSGACG00000016179	urb2	99	37.580	ENSFDAG00000021079	URB2	99	37.452	Fukomys_damarensis
ENSGACG00000016179	urb2	100	60.827	ENSFHEG00000010357	urb2	100	60.827	Fundulus_heteroclitus
ENSGACG00000016179	urb2	99	59.412	ENSGMOG00000012459	urb2	100	59.412	Gadus_morhua
ENSGACG00000016179	urb2	99	40.152	ENSGALG00000011101	URB2	99	40.025	Gallus_gallus
ENSGACG00000016179	urb2	99	41.035	ENSGAGG00000021879	URB2	99	41.035	Gopherus_agassizii
ENSGACG00000016179	urb2	99	38.254	ENSGGOG00000025643	URB2	99	38.126	Gorilla_gorilla
ENSGACG00000016179	urb2	100	74.545	ENSHBUG00000018469	urb2	97	74.545	Haplochromis_burtoni
ENSGACG00000016179	urb2	97	36.700	ENSHGLG00000016561	URB2	99	36.568	Heterocephalus_glaber_female
ENSGACG00000016179	urb2	99	37.039	ENSHGLG00100001838	URB2	99	36.910	Heterocephalus_glaber_male
ENSGACG00000016179	urb2	100	44.965	ENSIPUG00000020315	urb2	100	44.965	Ictalurus_punctatus
ENSGACG00000016179	urb2	99	36.818	ENSSTOG00000025323	URB2	99	37.073	Ictidomys_tridecemlineatus
ENSGACG00000016179	urb2	99	37.244	ENSJJAG00000011998	Urb2	99	37.115	Jaculus_jaculus
ENSGACG00000016179	urb2	100	60.432	ENSKMAG00000020129	urb2	100	60.731	Kryptolebias_marmoratus
ENSGACG00000016179	urb2	99	39.621	ENSLACG00000002038	URB2	99	39.570	Latimeria_chalumnae
ENSGACG00000016179	urb2	99	45.756	ENSLOCG00000015462	urb2	99	45.884	Lepisosteus_oculatus
ENSGACG00000016179	urb2	99	36.859	ENSLAFG00000012484	URB2	100	36.731	Loxodonta_africana
ENSGACG00000016179	urb2	99	38.150	ENSMFAG00000039905	URB2	99	38.022	Macaca_fascicularis
ENSGACG00000016179	urb2	99	38.279	ENSMMUG00000009509	URB2	99	38.150	Macaca_mulatta
ENSGACG00000016179	urb2	99	38.150	ENSMNEG00000038762	URB2	99	38.022	Macaca_nemestrina
ENSGACG00000016179	urb2	99	38.407	ENSMLEG00000043252	URB2	99	38.279	Mandrillus_leucophaeus
ENSGACG00000016179	urb2	100	62.928	ENSMAMG00000020365	urb2	100	62.279	Mastacembelus_armatus
ENSGACG00000016179	urb2	100	73.054	ENSMZEG00005011027	urb2	97	73.054	Maylandia_zebra
ENSGACG00000016179	urb2	94	37.289	ENSMGAG00000012073	URB2	99	37.095	Meleagris_gallopavo
ENSGACG00000016179	urb2	95	61.702	ENSMAUG00000017980	Urb2	99	61.702	Mesocricetus_auratus
ENSGACG00000016179	urb2	100	37.468	ENSMICG00000033302	URB2	100	37.484	Microcebus_murinus
ENSGACG00000016179	urb2	99	36.994	ENSMOCG00000020369	Urb2	99	36.866	Microtus_ochrogaster
ENSGACG00000016179	urb2	100	66.627	ENSMALG00000006529	urb2	100	66.627	Monopterus_albus
ENSGACG00000016179	urb2	99	36.825	ENSMUSG00000031976	Urb2	99	36.697	Mus_musculus
ENSGACG00000016179	urb2	99	37.779	ENSMPUG00000012438	URB2	99	37.652	Mustela_putorius_furo
ENSGACG00000016179	urb2	99	37.172	ENSNGAG00000016524	Urb2	99	37.220	Nannospalax_galili
ENSGACG00000016179	urb2	99	38.019	ENSNLEG00000014450	URB2	99	37.940	Nomascus_leucogenys
ENSGACG00000016179	urb2	91	45.946	ENSMEUG00000016434	URB2	94	45.946	Notamacropus_eugenii
ENSGACG00000016179	urb2	89	80.952	ENSOPRG00000009906	URB2	88	80.952	Ochotona_princeps
ENSGACG00000016179	urb2	99	37.725	ENSODEG00000005593	URB2	99	37.661	Octodon_degus
ENSGACG00000016179	urb2	100	67.416	ENSONIG00000017078	urb2	100	67.674	Oreochromis_niloticus
ENSGACG00000016179	urb2	99	36.170	ENSOANG00000013732	URB2	99	36.428	Ornithorhynchus_anatinus
ENSGACG00000016179	urb2	100	37.181	ENSOCUG00000010700	URB2	100	37.412	Oryctolagus_cuniculus
ENSGACG00000016179	urb2	100	58.520	ENSORLG00000010915	urb2	100	58.763	Oryzias_latipes
ENSGACG00000016179	urb2	100	59.005	ENSORLG00020003361	urb2	100	59.187	Oryzias_latipes_hni
ENSGACG00000016179	urb2	100	58.217	ENSORLG00015001534	urb2	100	58.156	Oryzias_latipes_hsok
ENSGACG00000016179	urb2	100	58.991	ENSOMEG00000010076	urb2	100	58.967	Oryzias_melastigma
ENSGACG00000016179	urb2	100	36.754	ENSOGAG00000003021	URB2	100	36.626	Otolemur_garnettii
ENSGACG00000016179	urb2	100	37.056	ENSOARG00000003102	URB2	100	37.119	Ovis_aries
ENSGACG00000016179	urb2	99	38.190	ENSPPAG00000040629	URB2	99	38.062	Pan_paniscus
ENSGACG00000016179	urb2	99	37.037	ENSPPRG00000012767	URB2	99	37.061	Panthera_pardus
ENSGACG00000016179	urb2	99	37.061	ENSPTIG00000012577	URB2	99	37.084	Panthera_tigris_altaica
ENSGACG00000016179	urb2	99	38.383	ENSPTRG00000002092	URB2	99	38.254	Pan_troglodytes
ENSGACG00000016179	urb2	99	37.058	ENSPANG00000002245	URB2	99	36.866	Papio_anubis
ENSGACG00000016179	urb2	99	46.713	ENSPKIG00000005787	urb2	99	46.310	Paramormyrops_kingsleyae
ENSGACG00000016179	urb2	99	40.570	ENSPSIG00000002690	URB2	99	40.443	Pelodiscus_sinensis
ENSGACG00000016179	urb2	96	35.729	ENSPEMG00000019551	Urb2	100	35.667	Peromyscus_maniculatus_bairdii
ENSGACG00000016179	urb2	99	38.526	ENSPCIG00000030071	URB2	99	38.526	Phascolarctos_cinereus
ENSGACG00000016179	urb2	100	61.524	ENSPFOG00000014330	urb2	100	61.524	Poecilia_formosa
ENSGACG00000016179	urb2	100	60.012	ENSPLAG00000014654	urb2	100	60.012	Poecilia_latipinna
ENSGACG00000016179	urb2	100	60.548	ENSPMEG00000012356	urb2	100	60.610	Poecilia_mexicana
ENSGACG00000016179	urb2	100	59.801	ENSPREG00000010268	urb2	100	59.863	Poecilia_reticulata
ENSGACG00000016179	urb2	100	38.506	ENSPPYG00000000123	URB2	100	38.363	Pongo_abelii
ENSGACG00000016179	urb2	100	37.701	ENSPCOG00000023537	URB2	100	37.556	Propithecus_coquereli
ENSGACG00000016179	urb2	99	34.633	ENSPVAG00000002108	URB2	99	34.569	Pteropus_vampyrus
ENSGACG00000016179	urb2	89	65.839	ENSPNYG00000016840	urb2	95	65.908	Pundamilia_nyererei
ENSGACG00000016179	urb2	99	44.779	ENSPNAG00000013684	urb2	99	44.779	Pygocentrus_nattereri
ENSGACG00000016179	urb2	99	36.584	ENSRNOG00000026853	Urb2	97	36.694	Rattus_norvegicus
ENSGACG00000016179	urb2	99	38.536	ENSRBIG00000037937	URB2	99	38.457	Rhinopithecus_bieti
ENSGACG00000016179	urb2	99	38.407	ENSRROG00000039854	URB2	99	38.328	Rhinopithecus_roxellana
ENSGACG00000016179	urb2	99	37.636	ENSSBOG00000023055	URB2	99	37.508	Saimiri_boliviensis_boliviensis
ENSGACG00000016179	urb2	99	37.862	ENSSHAG00000014735	URB2	99	37.878	Sarcophilus_harrisii
ENSGACG00000016179	urb2	97	45.062	ENSSFOG00015015432	urb2	98	45.419	Scleropages_formosus
ENSGACG00000016179	urb2	89	67.437	ENSSMAG00000004984	urb2	95	67.437	Scophthalmus_maximus
ENSGACG00000016179	urb2	100	68.192	ENSSDUG00000000902	urb2	100	68.310	Seriola_dumerili
ENSGACG00000016179	urb2	99	40.101	ENSSPUG00000018549	URB2	99	39.912	Sphenodon_punctatus
ENSGACG00000016179	urb2	100	67.788	ENSSPAG00000013632	urb2	100	68.029	Stegastes_partitus
ENSGACG00000016179	urb2	100	37.123	ENSSSCG00000010186	URB2	100	37.163	Sus_scrofa
ENSGACG00000016179	urb2	99	39.072	ENSTGUG00000009990	URB2	99	38.943	Taeniopygia_guttata
ENSGACG00000016179	urb2	100	58.990	ENSTRUG00000008173	urb2	100	58.749	Takifugu_rubripes
ENSGACG00000016179	urb2	94	69.565	ENSTNIG00000017689	urb2	96	68.562	Tetraodon_nigroviridis
ENSGACG00000016179	urb2	95	76.190	ENSTTRG00000014864	URB2	95	76.190	Tursiops_truncatus
ENSGACG00000016179	urb2	100	37.580	ENSUAMG00000015022	URB2	100	37.356	Ursus_americanus
ENSGACG00000016179	urb2	100	37.580	ENSUMAG00000004728	URB2	100	37.356	Ursus_maritimus
ENSGACG00000016179	urb2	52	62.676	ENSVPAG00000001750	-	51	62.676	Vicugna_pacos
ENSGACG00000016179	urb2	99	36.532	ENSVVUG00000006747	URB2	99	36.474	Vulpes_vulpes
ENSGACG00000016179	urb2	99	35.547	ENSXETG00000023331	urb2	99	35.510	Xenopus_tropicalis
ENSGACG00000016179	urb2	100	60.236	ENSXMAG00000015059	urb2	100	60.299	Xiphophorus_maculatus