EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000016260 (Gene tree)
Gene ID: -
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 12549 bases
Position: chrgroupXIV:3433582-3446130
Accession: ZDB-GENE-040426-2854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000021455	rRNA_proc-arch	PF13234.6	6.8e-85	1	1
ENSGACP00000021460	rRNA_proc-arch	PF13234.6	7.9e-85	1	1
ENSGACP00000021455	DEAD	PF00270.29	1.1e-16	1	1
ENSGACP00000021460	DEAD	PF00270.29	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000021501	-	3595	-	ENSGACP00000021460	1030 (aa)	-	G3PV23
ENSGACT00000021496	-	3124	-	ENSGACP00000021455	953 (aa)	-	G3PV18

Gene Model

Click here to download ENSGACG00000016260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000016260	mtrex	96	36.164	ENSGACG00000002927	skiv2l	75	36.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016260	mtrex	96	85.217	ENSG00000039123	MTREX	100	79.028	Homo_sapiens
ENSGACG00000016260	mtrex	99	92.065	ENSAPOG00000007814	mtrex	100	87.271	Acanthochromis_polyacanthus
ENSGACG00000016260	mtrex	96	85.326	ENSAMEG00000013856	MTREX	100	79.143	Ailuropoda_melanoleuca
ENSGACG00000016260	mtrex	100	85.010	ENSACIG00000015117	mtrex	100	85.814	Amphilophus_citrinellus
ENSGACG00000016260	mtrex	99	92.174	ENSAOCG00000011884	mtrex	100	87.464	Amphiprion_ocellaris
ENSGACG00000016260	mtrex	99	92.065	ENSAPEG00000019384	mtrex	100	87.464	Amphiprion_percula
ENSGACG00000016260	mtrex	99	92.057	ENSATEG00000015117	mtrex	100	88.320	Anabas_testudineus
ENSGACG00000016260	mtrex	96	85.109	ENSAPLG00000009694	MTREX	99	81.000	Anas_platyrhynchos
ENSGACG00000016260	mtrex	96	86.087	ENSACAG00000015200	MTREX	96	80.268	Anolis_carolinensis
ENSGACG00000016260	mtrex	96	85.326	ENSANAG00000023095	MTREX	100	79.314	Aotus_nancymaae
ENSGACG00000016260	mtrex	99	91.739	ENSACLG00000001921	mtrex	100	86.711	Astatotilapia_calliptera
ENSGACG00000016260	mtrex	91	86.997	ENSAMXG00000018751	mtrex	99	81.339	Astyanax_mexicanus
ENSGACG00000016260	mtrex	96	85.217	ENSBTAG00000010518	MTREX	100	79.409	Bos_taurus
ENSGACG00000016260	mtrex	96	53.696	WBGene00012342	mtr-4	88	53.493	Caenorhabditis_elegans
ENSGACG00000016260	mtrex	96	85.326	ENSCJAG00000001773	MTREX	100	78.863	Callithrix_jacchus
ENSGACG00000016260	mtrex	96	85.326	ENSCAFG00000006818	MTREX	100	79.218	Canis_familiaris
ENSGACG00000016260	mtrex	96	85.326	ENSCAFG00020024352	MTREX	100	79.218	Canis_lupus_dingo
ENSGACG00000016260	mtrex	96	85.109	ENSCHIG00000024413	MTREX	100	79.163	Capra_hircus
ENSGACG00000016260	mtrex	89	88.276	ENSTSYG00000007389	MTREX	100	81.688	Carlito_syrichta
ENSGACG00000016260	mtrex	87	72.603	ENSCAPG00000008696	MTREX	95	72.273	Cavia_aperea
ENSGACG00000016260	mtrex	96	85.435	ENSCPOG00000009797	MTREX	100	79.752	Cavia_porcellus
ENSGACG00000016260	mtrex	96	85.326	ENSCCAG00000014177	MTREX	100	79.218	Cebus_capucinus
ENSGACG00000016260	mtrex	96	85.217	ENSCATG00000042153	MTREX	100	79.028	Cercocebus_atys
ENSGACG00000016260	mtrex	96	85.435	ENSCLAG00000006622	MTREX	100	79.638	Chinchilla_lanigera
ENSGACG00000016260	mtrex	96	81.473	ENSCSAG00000016445	MTREX	100	75.760	Chlorocebus_sabaeus
ENSGACG00000016260	mtrex	69	94.444	ENSCHOG00000010936	-	70	94.444	Choloepus_hoffmanni
ENSGACG00000016260	mtrex	96	85.652	ENSCPBG00000026551	MTREX	94	79.885	Chrysemys_picta_bellii
ENSGACG00000016260	mtrex	96	70.130	ENSCING00000003239	-	99	65.038	Ciona_intestinalis
ENSGACG00000016260	mtrex	96	69.156	ENSCSAVG00000009304	-	99	68.784	Ciona_savignyi
ENSGACG00000016260	mtrex	96	85.217	ENSCANG00000035770	MTREX	100	79.068	Colobus_angolensis_palliatus
ENSGACG00000016260	mtrex	96	85.217	ENSCGRG00001024680	Mtrex	100	79.580	Cricetulus_griseus_chok1gshd
ENSGACG00000016260	mtrex	96	85.217	ENSCGRG00000000307	Mtrex	100	79.580	Cricetulus_griseus_crigri
ENSGACG00000016260	mtrex	100	87.838	ENSCSEG00000018621	mtrex	98	87.838	Cynoglossus_semilaevis
ENSGACG00000016260	mtrex	96	92.065	ENSCVAG00000004556	mtrex	100	87.078	Cyprinodon_variegatus
ENSGACG00000016260	mtrex	96	86.942	ENSDARG00000013457	mtrex	100	81.853	Danio_rerio
ENSGACG00000016260	mtrex	96	85.326	ENSDNOG00000015375	MTREX	100	79.582	Dasypus_novemcinctus
ENSGACG00000016260	mtrex	96	85.109	ENSDORG00000006782	Mtrex	100	79.370	Dipodomys_ordii
ENSGACG00000016260	mtrex	96	66.630	FBgn0001986	Mtr4	87	66.056	Drosophila_melanogaster
ENSGACG00000016260	mtrex	82	76.502	ENSETEG00000000727	MTREX	74	76.964	Echinops_telfairi
ENSGACG00000016260	mtrex	96	75.761	ENSEBUG00000012869	mtrex	99	70.413	Eptatretus_burgeri
ENSGACG00000016260	mtrex	96	85.217	ENSEASG00005013270	MTREX	100	79.274	Equus_asinus_asinus
ENSGACG00000016260	mtrex	96	85.326	ENSECAG00000023723	MTREX	100	86.977	Equus_caballus
ENSGACG00000016260	mtrex	84	90.148	ENSEEUG00000000527	MTREX	100	71.760	Erinaceus_europaeus
ENSGACG00000016260	mtrex	96	88.261	ENSELUG00000004898	mtrex	100	86.660	Esox_lucius
ENSGACG00000016260	mtrex	96	85.326	ENSFCAG00000010575	MTREX	100	79.123	Felis_catus
ENSGACG00000016260	mtrex	96	84.348	ENSFALG00000010850	MTREX	100	78.448	Ficedula_albicollis
ENSGACG00000016260	mtrex	96	84.891	ENSFDAG00000011199	MTREX	100	79.274	Fukomys_damarensis
ENSGACG00000016260	mtrex	99	91.413	ENSFHEG00000023014	mtrex	100	84.749	Fundulus_heteroclitus
ENSGACG00000016260	mtrex	100	85.063	ENSGMOG00000014702	mtrex	100	85.092	Gadus_morhua
ENSGACG00000016260	mtrex	96	85.326	ENSGALG00000014709	MTREX	86	79.576	Gallus_gallus
ENSGACG00000016260	mtrex	97	90.753	ENSGAFG00000012425	mtrex	100	86.500	Gambusia_affinis
ENSGACG00000016260	mtrex	96	85.761	ENSGAGG00000020036	MTREX	100	79.885	Gopherus_agassizii
ENSGACG00000016260	mtrex	96	85.217	ENSGGOG00000001867	MTREX	100	79.123	Gorilla_gorilla
ENSGACG00000016260	mtrex	99	91.739	ENSHBUG00000006229	mtrex	100	86.711	Haplochromis_burtoni
ENSGACG00000016260	mtrex	96	85.326	ENSHGLG00000019445	SKIV2L2	100	79.522	Heterocephalus_glaber_female
ENSGACG00000016260	mtrex	96	85.326	ENSHGLG00100011833	SKIV2L2	100	79.522	Heterocephalus_glaber_male
ENSGACG00000016260	mtrex	96	88.198	ENSHCOG00000019995	mtrex	100	86.646	Hippocampus_comes
ENSGACG00000016260	mtrex	96	87.065	ENSIPUG00000024348	skiv2l2	100	82.081	Ictalurus_punctatus
ENSGACG00000016260	mtrex	96	85.217	ENSSTOG00000010802	MTREX	100	79.465	Ictidomys_tridecemlineatus
ENSGACG00000016260	mtrex	96	80.153	ENSJJAG00000020975	Mtrex	100	74.593	Jaculus_jaculus
ENSGACG00000016260	mtrex	99	91.304	ENSKMAG00000012642	mtrex	100	87.246	Kryptolebias_marmoratus
ENSGACG00000016260	mtrex	99	92.717	ENSLBEG00000019367	mtrex	99	90.605	Labrus_bergylta
ENSGACG00000016260	mtrex	96	85.870	ENSLACG00000009075	MTREX	100	80.172	Latimeria_chalumnae
ENSGACG00000016260	mtrex	96	87.419	ENSLOCG00000010186	mtrex	100	82.002	Lepisosteus_oculatus
ENSGACG00000016260	mtrex	96	82.826	ENSLAFG00000010497	MTREX	100	76.952	Loxodonta_africana
ENSGACG00000016260	mtrex	96	85.217	ENSMFAG00000031610	MTREX	100	79.028	Macaca_fascicularis
ENSGACG00000016260	mtrex	96	85.109	ENSMMUG00000010379	MTREX	100	78.538	Macaca_mulatta
ENSGACG00000016260	mtrex	96	85.217	ENSMNEG00000032746	MTREX	100	79.028	Macaca_nemestrina
ENSGACG00000016260	mtrex	96	85.217	ENSMLEG00000041051	MTREX	100	79.028	Mandrillus_leucophaeus
ENSGACG00000016260	mtrex	96	92.274	ENSMAMG00000016753	mtrex	100	87.287	Mastacembelus_armatus
ENSGACG00000016260	mtrex	99	91.739	ENSMZEG00005000414	mtrex	100	86.711	Maylandia_zebra
ENSGACG00000016260	mtrex	96	61.489	ENSMGAG00000003980	MTREX	99	59.274	Meleagris_gallopavo
ENSGACG00000016260	mtrex	96	85.326	ENSMAUG00000010727	Mtrex	100	79.389	Mesocricetus_auratus
ENSGACG00000016260	mtrex	96	85.435	ENSMICG00000012779	MTREX	100	79.600	Microcebus_murinus
ENSGACG00000016260	mtrex	96	85.109	ENSMOCG00000019886	Mtrex	100	79.370	Microtus_ochrogaster
ENSGACG00000016260	mtrex	100	85.618	ENSMMOG00000002476	mtrex	100	86.169	Mola_mola
ENSGACG00000016260	mtrex	96	85.109	ENSMODG00000019494	MTREX	100	79.769	Monodelphis_domestica
ENSGACG00000016260	mtrex	99	83.384	ENSMALG00000002917	mtrex	100	83.384	Monopterus_albus
ENSGACG00000016260	mtrex	96	85.000	MGP_CAROLIEiJ_G0018896	Mtrex	100	79.218	Mus_caroli
ENSGACG00000016260	mtrex	96	84.891	ENSMUSG00000016018	Mtrex	100	79.083	Mus_musculus
ENSGACG00000016260	mtrex	96	85.000	MGP_PahariEiJ_G0015967	Mtrex	100	79.179	Mus_pahari
ENSGACG00000016260	mtrex	96	84.891	MGP_SPRETEiJ_G0019775	Mtrex	100	79.083	Mus_spretus
ENSGACG00000016260	mtrex	96	85.326	ENSMPUG00000007619	MTREX	100	79.123	Mustela_putorius_furo
ENSGACG00000016260	mtrex	96	84.724	ENSMLUG00000001152	MTREX	100	78.463	Myotis_lucifugus
ENSGACG00000016260	mtrex	96	85.109	ENSNGAG00000011938	Mtrex	100	79.504	Nannospalax_galili
ENSGACG00000016260	mtrex	99	91.630	ENSNBRG00000011293	mtrex	100	86.616	Neolamprologus_brichardi
ENSGACG00000016260	mtrex	96	80.803	ENSNLEG00000001494	MTREX	100	74.881	Nomascus_leucogenys
ENSGACG00000016260	mtrex	77	94.118	ENSMEUG00000006496	-	77	94.118	Notamacropus_eugenii
ENSGACG00000016260	mtrex	96	70.978	ENSOPRG00000008009	MTREX	100	66.922	Ochotona_princeps
ENSGACG00000016260	mtrex	96	84.783	ENSODEG00000017234	MTREX	100	78.742	Octodon_degus
ENSGACG00000016260	mtrex	99	91.522	ENSONIG00000007587	mtrex	100	86.616	Oreochromis_niloticus
ENSGACG00000016260	mtrex	54	79.271	ENSOANG00000004885	-	99	80.426	Ornithorhynchus_anatinus
ENSGACG00000016260	mtrex	96	85.435	ENSOCUG00000004463	MTREX	100	79.561	Oryctolagus_cuniculus
ENSGACG00000016260	mtrex	96	91.621	ENSORLG00000005443	mtrex	100	87.066	Oryzias_latipes
ENSGACG00000016260	mtrex	99	91.513	ENSORLG00020006329	mtrex	100	87.066	Oryzias_latipes_hni
ENSGACG00000016260	mtrex	96	91.621	ENSORLG00015012924	mtrex	100	87.066	Oryzias_latipes_hsok
ENSGACG00000016260	mtrex	96	91.215	ENSOMEG00000008825	mtrex	100	86.303	Oryzias_melastigma
ENSGACG00000016260	mtrex	96	85.435	ENSOGAG00000002886	MTREX	100	79.314	Otolemur_garnettii
ENSGACG00000016260	mtrex	96	84.832	ENSOARG00000007764	MTREX	100	78.937	Ovis_aries
ENSGACG00000016260	mtrex	96	85.217	ENSPPAG00000039291	MTREX	100	79.123	Pan_paniscus
ENSGACG00000016260	mtrex	96	85.326	ENSPPRG00000019701	MTREX	100	79.123	Panthera_pardus
ENSGACG00000016260	mtrex	96	83.804	ENSPTIG00000009313	MTREX	100	77.788	Panthera_tigris_altaica
ENSGACG00000016260	mtrex	96	85.217	ENSPTRG00000016878	MTREX	100	79.123	Pan_troglodytes
ENSGACG00000016260	mtrex	96	85.109	ENSPANG00000009697	MTREX	100	78.932	Papio_anubis
ENSGACG00000016260	mtrex	97	86.037	ENSPKIG00000020833	mtrex	100	81.581	Paramormyrops_kingsleyae
ENSGACG00000016260	mtrex	96	85.543	ENSPSIG00000012150	MTREX	100	79.827	Pelodiscus_sinensis
ENSGACG00000016260	mtrex	100	83.703	ENSPMGG00000002582	mtrex	100	83.960	Periophthalmus_magnuspinnatus
ENSGACG00000016260	mtrex	91	67.549	ENSPMAG00000009668	mtrex	100	63.397	Petromyzon_marinus
ENSGACG00000016260	mtrex	96	85.000	ENSPCIG00000024730	MTREX	100	83.403	Phascolarctos_cinereus
ENSGACG00000016260	mtrex	83	90.680	ENSPFOG00000003141	mtrex	100	91.244	Poecilia_formosa
ENSGACG00000016260	mtrex	96	91.848	ENSPLAG00000021311	mtrex	100	87.464	Poecilia_latipinna
ENSGACG00000016260	mtrex	96	90.294	ENSPMEG00000010597	mtrex	99	88.192	Poecilia_mexicana
ENSGACG00000016260	mtrex	96	91.394	ENSPREG00000003089	mtrex	100	86.982	Poecilia_reticulata
ENSGACG00000016260	mtrex	94	84.939	ENSPPYG00000015469	MTREX	98	78.779	Pongo_abelii
ENSGACG00000016260	mtrex	88	76.678	ENSPCAG00000013120	MTREX	88	76.007	Procavia_capensis
ENSGACG00000016260	mtrex	95	79.011	ENSPCOG00000018092	MTREX	100	73.795	Propithecus_coquereli
ENSGACG00000016260	mtrex	96	85.217	ENSPVAG00000002445	MTREX	100	78.932	Pteropus_vampyrus
ENSGACG00000016260	mtrex	99	91.630	ENSPNYG00000006164	mtrex	100	86.616	Pundamilia_nyererei
ENSGACG00000016260	mtrex	96	86.848	ENSPNAG00000008794	mtrex	100	81.792	Pygocentrus_nattereri
ENSGACG00000016260	mtrex	96	83.952	ENSRNOG00000010125	Mtrex	97	78.428	Rattus_norvegicus
ENSGACG00000016260	mtrex	96	83.261	ENSRBIG00000034930	MTREX	100	77.355	Rhinopithecus_bieti
ENSGACG00000016260	mtrex	96	85.217	ENSRROG00000039895	MTREX	100	79.068	Rhinopithecus_roxellana
ENSGACG00000016260	mtrex	96	55.496	YJL050W	MTR4	87	55.235	Saccharomyces_cerevisiae
ENSGACG00000016260	mtrex	96	85.326	ENSSBOG00000026693	MTREX	100	79.314	Saimiri_boliviensis_boliviensis
ENSGACG00000016260	mtrex	96	85.109	ENSSHAG00000004600	MTREX	99	81.883	Sarcophilus_harrisii
ENSGACG00000016260	mtrex	96	87.609	ENSSFOG00015014355	skiv2l2	100	82.274	Scleropages_formosus
ENSGACG00000016260	mtrex	99	92.826	ENSSMAG00000007572	mtrex	100	88.309	Scophthalmus_maximus
ENSGACG00000016260	mtrex	99	92.935	ENSSDUG00000023789	mtrex	100	88.814	Seriola_dumerili
ENSGACG00000016260	mtrex	99	92.935	ENSSLDG00000006301	mtrex	100	88.717	Seriola_lalandi_dorsalis
ENSGACG00000016260	mtrex	96	84.891	ENSSARG00000008387	MTREX	100	77.555	Sorex_araneus
ENSGACG00000016260	mtrex	84	95.050	ENSSPUG00000007071	MTREX	84	95.050	Sphenodon_punctatus
ENSGACG00000016260	mtrex	99	90.414	ENSSPAG00000011319	mtrex	94	90.741	Stegastes_partitus
ENSGACG00000016260	mtrex	96	85.326	ENSSSCG00000016911	MTREX	100	79.258	Sus_scrofa
ENSGACG00000016260	mtrex	96	83.696	ENSTGUG00000002480	MTREX	100	78.044	Taeniopygia_guttata
ENSGACG00000016260	mtrex	99	90.978	ENSTRUG00000014571	mtrex	100	86.473	Takifugu_rubripes
ENSGACG00000016260	mtrex	96	72.470	ENSTBEG00000007769	MTREX	100	66.826	Tupaia_belangeri
ENSGACG00000016260	mtrex	96	85.217	ENSTTRG00000008678	MTREX	100	79.504	Tursiops_truncatus
ENSGACG00000016260	mtrex	96	85.326	ENSUAMG00000023061	MTREX	100	79.123	Ursus_americanus
ENSGACG00000016260	mtrex	96	84.599	ENSUMAG00000009373	MTREX	99	86.171	Ursus_maritimus
ENSGACG00000016260	mtrex	96	75.870	ENSVPAG00000011174	MTREX	100	70.925	Vicugna_pacos
ENSGACG00000016260	mtrex	96	85.326	ENSVVUG00000021337	MTREX	100	79.218	Vulpes_vulpes
ENSGACG00000016260	mtrex	96	85.761	ENSXETG00000032798	MTREX	100	80.154	Xenopus_tropicalis
ENSGACG00000016260	mtrex	99	92.065	ENSXMAG00000004799	mtrex	100	87.464	Xiphophorus_maculatus