EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000016333 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 12397 bases
Position: chrgroupXIV:3583797-3596193
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000021566	AF-4	PF05110.13	0	1	1
ENSGACP00000021572	AF-4	PF05110.13	0	1	1
ENSGACP00000021574	AF-4	PF05110.13	5.7e-109	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000021613	-	3438	-	ENSGACP00000021572	1146 (aa)	-	G3PVD5
ENSGACT00000021615	-	1029	-	ENSGACP00000021574	343 (aa)	-	G3PVD7
ENSGACT00000021607	-	3770	-	ENSGACP00000021566	1177 (aa)	-	G3PVC9

Gene Model

Click here to download ENSGACG00000016333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000016333	-	99	30.909	ENSGACG00000018740	aff2	68	32.740

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016333	-	100	32.873	ENSG00000144218	AFF3	69	46.094	Homo_sapiens
ENSGACG00000016333	-	100	37.594	ENSG00000172493	AFF1	96	38.000	Homo_sapiens
ENSGACG00000016333	-	99	62.912	ENSAPOG00000002994	-	99	59.293	Acanthochromis_polyacanthus
ENSGACG00000016333	-	79	32.903	ENSAMEG00000015682	-	90	33.657	Ailuropoda_melanoleuca
ENSGACG00000016333	-	95	33.333	ENSACIG00000022732	aff2	66	41.921	Amphilophus_citrinellus
ENSGACG00000016333	-	99	60.434	ENSACIG00000021066	-	96	61.625	Amphilophus_citrinellus
ENSGACG00000016333	-	100	61.644	ENSAOCG00000020283	-	99	58.115	Amphiprion_ocellaris
ENSGACG00000016333	-	100	61.644	ENSAPEG00000018794	-	99	58.197	Amphiprion_percula
ENSGACG00000016333	-	100	62.032	ENSATEG00000015552	-	99	58.354	Anabas_testudineus
ENSGACG00000016333	-	100	36.386	ENSAPLG00000004059	AFF1	99	33.601	Anas_platyrhynchos
ENSGACG00000016333	-	100	35.910	ENSANAG00000017095	AFF1	99	31.906	Aotus_nancymaae
ENSGACG00000016333	-	95	35.897	ENSACLG00000011879	aff4	68	36.288	Astatotilapia_calliptera
ENSGACG00000016333	-	99	58.933	ENSACLG00000002905	-	99	52.748	Astatotilapia_calliptera
ENSGACG00000016333	-	50	41.296	ENSAMXG00000000387	aff2	57	43.373	Astyanax_mexicanus
ENSGACG00000016333	-	95	40.563	ENSAMXG00000015641	-	51	55.155	Astyanax_mexicanus
ENSGACG00000016333	-	96	34.483	ENSBTAG00000012449	AFF3	57	41.322	Bos_taurus
ENSGACG00000016333	-	100	36.118	ENSBTAG00000018488	AFF1	99	31.155	Bos_taurus
ENSGACG00000016333	-	100	33.149	ENSCJAG00000010071	AFF3	75	31.967	Callithrix_jacchus
ENSGACG00000016333	-	100	37.065	ENSCJAG00000006047	AFF1	99	31.778	Callithrix_jacchus
ENSGACG00000016333	-	51	38.406	ENSCAFG00000000930	AFF4	68	36.383	Canis_familiaris
ENSGACG00000016333	-	100	35.000	ENSCAFG00000009476	AFF1	99	31.088	Canis_familiaris
ENSGACG00000016333	-	100	33.425	ENSCAFG00000023079	AFF3	57	41.322	Canis_familiaris
ENSGACG00000016333	-	96	35.401	ENSCAFG00020008224	AFF1	99	30.848	Canis_lupus_dingo
ENSGACG00000016333	-	51	38.406	ENSCAFG00020000956	AFF4	65	36.522	Canis_lupus_dingo
ENSGACG00000016333	-	100	36.207	ENSCHIG00000008450	AFF1	99	31.873	Capra_hircus
ENSGACG00000016333	-	51	38.406	ENSCHIG00000015153	AFF4	68	36.797	Capra_hircus
ENSGACG00000016333	-	96	35.345	ENSCHIG00000026653	AFF3	57	41.322	Capra_hircus
ENSGACG00000016333	-	100	37.028	ENSTSYG00000002039	AFF1	95	31.665	Carlito_syrichta
ENSGACG00000016333	-	54	59.016	ENSCPOG00000034568	AFF1	81	59.016	Cavia_porcellus
ENSGACG00000016333	-	99	36.111	ENSCCAG00000027623	AFF1	95	38.107	Cebus_capucinus
ENSGACG00000016333	-	100	37.000	ENSCATG00000039501	AFF1	99	31.711	Cercocebus_atys
ENSGACG00000016333	-	100	33.425	ENSCATG00000045196	AFF3	74	31.633	Cercocebus_atys
ENSGACG00000016333	-	100	33.426	ENSCLAG00000017100	AFF3	91	32.922	Chinchilla_lanigera
ENSGACG00000016333	-	50	45.324	ENSCLAG00000013850	AFF4	69	36.667	Chinchilla_lanigera
ENSGACG00000016333	-	100	37.000	ENSCSAG00000004333	AFF1	99	31.958	Chlorocebus_sabaeus
ENSGACG00000016333	-	100	36.250	ENSCPBG00000005382	AFF1	99	33.538	Chrysemys_picta_bellii
ENSGACG00000016333	-	100	34.826	ENSCANG00000037514	AFF1	99	32.123	Colobus_angolensis_palliatus
ENSGACG00000016333	-	99	52.044	ENSCSEG00000000928	-	92	52.044	Cynoglossus_semilaevis
ENSGACG00000016333	-	97	54.179	ENSCVAG00000015626	-	99	46.058	Cyprinodon_variegatus
ENSGACG00000016333	-	95	35.380	ENSCVAG00000005218	aff4	71	35.795	Cyprinodon_variegatus
ENSGACG00000016333	-	78	33.770	ENSDNOG00000047074	-	82	34.426	Dasypus_novemcinctus
ENSGACG00000016333	-	82	32.749	ENSDNOG00000040256	-	84	33.626	Dasypus_novemcinctus
ENSGACG00000016333	-	100	34.332	ENSDORG00000007294	Aff3	61	53.226	Dipodomys_ordii
ENSGACG00000016333	-	90	33.702	ENSETEG00000014905	AFF1	67	34.426	Echinops_telfairi
ENSGACG00000016333	-	91	30.312	ENSEBUG00000012097	aff4	64	32.143	Eptatretus_burgeri
ENSGACG00000016333	-	51	37.681	ENSEASG00005018361	AFF4	68	36.364	Equus_asinus_asinus
ENSGACG00000016333	-	52	39.333	ENSEASG00005018275	AFF3	52	44.526	Equus_asinus_asinus
ENSGACG00000016333	-	100	35.381	ENSEASG00005012760	AFF1	99	31.415	Equus_asinus_asinus
ENSGACG00000016333	-	100	34.236	ENSECAG00000003619	AFF1	99	31.280	Equus_caballus
ENSGACG00000016333	-	100	33.425	ENSECAG00000006249	AFF3	64	33.515	Equus_caballus
ENSGACG00000016333	-	51	37.681	ENSECAG00000011969	AFF4	68	36.580	Equus_caballus
ENSGACG00000016333	-	90	33.129	ENSEEUG00000004876	AFF3	57	33.333	Erinaceus_europaeus
ENSGACG00000016333	-	99	44.388	ENSELUG00000019953	-	99	40.419	Esox_lucius
ENSGACG00000016333	-	96	35.079	ENSFCAG00000029806	AFF1	99	32.353	Felis_catus
ENSGACG00000016333	-	100	33.149	ENSFCAG00000029975	AFF3	75	33.190	Felis_catus
ENSGACG00000016333	-	100	52.660	ENSFHEG00000003521	-	100	44.075	Fundulus_heteroclitus
ENSGACG00000016333	-	96	30.990	ENSGALG00000009168	AFF2	64	34.232	Gallus_gallus
ENSGACG00000016333	-	94	50.303	ENSGAFG00000012317	-	99	47.436	Gambusia_affinis
ENSGACG00000016333	-	50	46.043	ENSGAGG00000020214	AFF4	69	37.554	Gopherus_agassizii
ENSGACG00000016333	-	100	33.149	ENSGGOG00000034914	AFF3	74	31.633	Gorilla_gorilla
ENSGACG00000016333	-	100	38.250	ENSGGOG00000008497	AFF1	99	31.789	Gorilla_gorilla
ENSGACG00000016333	-	99	58.933	ENSHBUG00000005828	-	99	52.502	Haplochromis_burtoni
ENSGACG00000016333	-	95	35.897	ENSHBUG00000021987	aff4	68	36.182	Haplochromis_burtoni
ENSGACG00000016333	-	74	50.459	ENSHGLG00000001384	AFF1	89	38.065	Heterocephalus_glaber_female
ENSGACG00000016333	-	99	33.333	ENSHGLG00100016607	AFF1	99	30.323	Heterocephalus_glaber_male
ENSGACG00000016333	-	100	49.721	ENSHCOG00000000539	-	99	43.237	Hippocampus_comes
ENSGACG00000016333	-	50	51.786	ENSHCOG00000004812	aff2	80	33.477	Hippocampus_comes
ENSGACG00000016333	-	50	36.334	ENSIPUG00000015259	-	98	36.174	Ictalurus_punctatus
ENSGACG00000016333	-	90	37.574	ENSIPUG00000015250	-	80	38.873	Ictalurus_punctatus
ENSGACG00000016333	-	100	37.129	ENSSTOG00000006530	AFF1	99	31.684	Ictidomys_tridecemlineatus
ENSGACG00000016333	-	100	33.978	ENSSTOG00000012140	AFF3	57	51.613	Ictidomys_tridecemlineatus
ENSGACG00000016333	-	97	31.865	ENSJJAG00000022176	Aff2	57	37.879	Jaculus_jaculus
ENSGACG00000016333	-	100	34.254	ENSJJAG00000013155	Aff3	61	51.613	Jaculus_jaculus
ENSGACG00000016333	-	98	32.493	ENSJJAG00000000912	Aff4	70	35.886	Jaculus_jaculus
ENSGACG00000016333	-	100	57.219	ENSKMAG00000013113	-	99	51.568	Kryptolebias_marmoratus
ENSGACG00000016333	-	100	60.822	ENSLBEG00000016928	-	100	59.786	Labrus_bergylta
ENSGACG00000016333	-	99	32.020	ENSLACG00000008183	-	91	32.000	Latimeria_chalumnae
ENSGACG00000016333	-	82	34.737	ENSLACG00000007303	AFF1	99	35.086	Latimeria_chalumnae
ENSGACG00000016333	-	96	34.830	ENSLOCG00000004025	AFF1	99	35.708	Lepisosteus_oculatus
ENSGACG00000016333	-	52	42.000	ENSLOCG00000010610	aff4	81	33.686	Lepisosteus_oculatus
ENSGACG00000016333	-	77	31.561	ENSLAFG00000018691	AFF2	91	31.561	Loxodonta_africana
ENSGACG00000016333	-	100	32.970	ENSMFAG00000031640	AFF3	64	33.065	Macaca_fascicularis
ENSGACG00000016333	-	100	37.000	ENSMFAG00000037700	AFF1	99	31.866	Macaca_fascicularis
ENSGACG00000016333	-	100	37.000	ENSMMUG00000014076	AFF1	99	31.778	Macaca_mulatta
ENSGACG00000016333	-	100	37.000	ENSMNEG00000031536	AFF1	99	31.630	Macaca_nemestrina
ENSGACG00000016333	-	100	37.000	ENSMLEG00000039099	AFF1	99	31.711	Mandrillus_leucophaeus
ENSGACG00000016333	-	100	64.171	ENSMAMG00000016189	-	99	56.809	Mastacembelus_armatus
ENSGACG00000016333	-	99	58.933	ENSMZEG00005020442	-	99	52.666	Maylandia_zebra
ENSGACG00000016333	-	95	35.897	ENSMZEG00005003218	aff4	68	36.288	Maylandia_zebra
ENSGACG00000016333	-	100	34.530	ENSMICG00000016001	AFF3	64	34.605	Microcebus_murinus
ENSGACG00000016333	-	61	60.656	ENSMOCG00000017389	Aff1	59	60.656	Microtus_ochrogaster
ENSGACG00000016333	-	97	65.029	ENSMMOG00000002118	-	98	65.143	Mola_mola
ENSGACG00000016333	-	100	63.587	ENSMALG00000002436	-	99	58.573	Monopterus_albus
ENSGACG00000016333	-	100	34.328	MGP_CAROLIEiJ_G0027469	Aff1	53	57.377	Mus_caroli
ENSGACG00000016333	-	100	32.320	MGP_CAROLIEiJ_G0014063	Aff3	74	34.639	Mus_caroli
ENSGACG00000016333	-	100	32.597	ENSMUSG00000037138	Aff3	64	49.206	Mus_musculus
ENSGACG00000016333	-	100	32.320	MGP_PahariEiJ_G0027310	Aff3	75	33.608	Mus_pahari
ENSGACG00000016333	-	55	40.805	MGP_PahariEiJ_G0017247	Aff1	72	34.895	Mus_pahari
ENSGACG00000016333	-	68	51.304	MGP_SPRETEiJ_G0028466	Aff1	91	32.480	Mus_spretus
ENSGACG00000016333	-	100	33.425	MGP_SPRETEiJ_G0014867	Aff3	74	34.639	Mus_spretus
ENSGACG00000016333	-	55	50.794	ENSMLUG00000015255	AFF3	70	50.794	Myotis_lucifugus
ENSGACG00000016333	-	100	34.807	ENSNGAG00000002408	Aff3	74	32.627	Nannospalax_galili
ENSGACG00000016333	-	94	37.105	ENSNLEG00000009429	AFF1	98	30.981	Nomascus_leucogenys
ENSGACG00000016333	-	100	33.149	ENSNLEG00000014317	AFF3	73	30.889	Nomascus_leucogenys
ENSGACG00000016333	-	50	36.630	ENSMEUG00000014599	AFF2	63	30.398	Notamacropus_eugenii
ENSGACG00000016333	-	96	36.554	ENSOPRG00000017154	-	99	30.459	Ochotona_princeps
ENSGACG00000016333	-	50	44.604	ENSODEG00000008137	AFF4	70	36.957	Octodon_degus
ENSGACG00000016333	-	99	57.895	ENSONIG00000007636	-	99	52.522	Oreochromis_niloticus
ENSGACG00000016333	-	100	35.437	ENSOCUG00000002105	AFF1	96	31.782	Oryctolagus_cuniculus
ENSGACG00000016333	-	74	66.265	ENSORLG00000006428	-	99	67.123	Oryzias_latipes
ENSGACG00000016333	-	87	66.265	ENSORLG00020003991	-	99	67.123	Oryzias_latipes_hni
ENSGACG00000016333	-	87	66.265	ENSORLG00015009287	-	99	67.123	Oryzias_latipes_hsok
ENSGACG00000016333	-	85	72.603	ENSOMEG00000005799	-	99	72.603	Oryzias_melastigma
ENSGACG00000016333	-	100	34.254	ENSOGAG00000013262	AFF3	64	34.511	Otolemur_garnettii
ENSGACG00000016333	-	100	36.609	ENSOGAG00000009622	-	72	35.981	Otolemur_garnettii
ENSGACG00000016333	-	100	35.468	ENSOARG00000004522	AFF1	99	31.663	Ovis_aries
ENSGACG00000016333	-	100	37.750	ENSPPAG00000029196	AFF1	99	31.955	Pan_paniscus
ENSGACG00000016333	-	100	33.149	ENSPPAG00000032057	AFF3	73	30.752	Pan_paniscus
ENSGACG00000016333	-	100	33.425	ENSPPRG00000014330	AFF3	74	33.190	Panthera_pardus
ENSGACG00000016333	-	96	35.696	ENSPPRG00000023590	AFF1	99	32.057	Panthera_pardus
ENSGACG00000016333	-	96	35.696	ENSPTIG00000011838	AFF1	97	35.343	Panthera_tigris_altaica
ENSGACG00000016333	-	100	37.750	ENSPTRG00000016255	AFF1	96	61.290	Pan_troglodytes
ENSGACG00000016333	-	100	33.149	ENSPTRG00000012281	AFF3	65	33.243	Pan_troglodytes
ENSGACG00000016333	-	93	35.809	ENSPANG00000016722	AFF1	98	31.037	Papio_anubis
ENSGACG00000016333	-	100	33.515	ENSPANG00000018693	AFF3	74	31.633	Papio_anubis
ENSGACG00000016333	-	95	32.386	ENSPKIG00000024249	AFF4	69	35.054	Paramormyrops_kingsleyae
ENSGACG00000016333	-	85	56.506	ENSPKIG00000007777	-	99	35.800	Paramormyrops_kingsleyae
ENSGACG00000016333	-	95	32.164	ENSPKIG00000024325	AFF4	69	36.601	Paramormyrops_kingsleyae
ENSGACG00000016333	-	98	32.527	ENSPSIG00000013003	AFF4	71	36.638	Pelodiscus_sinensis
ENSGACG00000016333	-	100	38.191	ENSPSIG00000003759	AFF1	71	38.539	Pelodiscus_sinensis
ENSGACG00000016333	-	100	32.143	ENSPEMG00000014802	Aff3	61	48.387	Peromyscus_maniculatus_bairdii
ENSGACG00000016333	-	99	54.960	ENSPFOG00000004581	-	99	48.284	Poecilia_formosa
ENSGACG00000016333	-	50	55.932	ENSPLAG00000005101	aff2	64	55.932	Poecilia_latipinna
ENSGACG00000016333	-	95	47.882	ENSPLAG00000012910	-	99	47.206	Poecilia_latipinna
ENSGACG00000016333	-	65	49.490	ENSPMEG00000020100	-	94	49.146	Poecilia_mexicana
ENSGACG00000016333	-	99	56.300	ENSPREG00000003514	-	99	48.735	Poecilia_reticulata
ENSGACG00000016333	-	100	36.118	ENSPPYG00000014910	AFF1	99	32.094	Pongo_abelii
ENSGACG00000016333	-	100	33.149	ENSPPYG00000012096	AFF3	71	31.633	Pongo_abelii
ENSGACG00000016333	-	53	51.064	ENSPCAG00000003995	AFF4	50	37.671	Procavia_capensis
ENSGACG00000016333	-	94	35.279	ENSPCOG00000027339	AFF1	69	36.772	Propithecus_coquereli
ENSGACG00000016333	-	100	34.060	ENSPCOG00000016986	AFF3	64	34.140	Propithecus_coquereli
ENSGACG00000016333	-	82	62.903	ENSPVAG00000014455	AFF1	80	58.209	Pteropus_vampyrus
ENSGACG00000016333	-	79	34.643	ENSPVAG00000006595	AFF3	57	34.875	Pteropus_vampyrus
ENSGACG00000016333	-	95	35.897	ENSPNYG00000014804	aff4	68	36.288	Pundamilia_nyererei
ENSGACG00000016333	-	99	31.383	ENSPNAG00000005945	aff2	79	32.582	Pygocentrus_nattereri
ENSGACG00000016333	-	100	32.597	ENSRNOG00000018830	Aff3	75	34.021	Rattus_norvegicus
ENSGACG00000016333	-	60	59.677	ENSRNOG00000002232	Aff1	85	59.677	Rattus_norvegicus
ENSGACG00000016333	-	100	35.750	ENSRBIG00000032242	AFF1	99	32.362	Rhinopithecus_bieti
ENSGACG00000016333	-	100	33.425	ENSRBIG00000029993	AFF3	65	33.515	Rhinopithecus_bieti
ENSGACG00000016333	-	51	38.406	ENSRBIG00000029376	AFF4	68	36.501	Rhinopithecus_bieti
ENSGACG00000016333	-	100	35.750	ENSRROG00000045716	AFF1	99	32.362	Rhinopithecus_roxellana
ENSGACG00000016333	-	100	33.425	ENSRROG00000033773	AFF3	74	31.633	Rhinopithecus_roxellana
ENSGACG00000016333	-	51	38.406	ENSRROG00000033812	AFF4	68	36.501	Rhinopithecus_roxellana
ENSGACG00000016333	-	100	34.739	ENSSBOG00000035401	AFF1	99	31.570	Saimiri_boliviensis_boliviensis
ENSGACG00000016333	-	100	33.425	ENSSBOG00000026667	AFF3	57	41.322	Saimiri_boliviensis_boliviensis
ENSGACG00000016333	-	84	59.677	ENSSHAG00000004203	AFF1	82	59.677	Sarcophilus_harrisii
ENSGACG00000016333	-	97	33.508	ENSSHAG00000013198	AFF4	68	35.430	Sarcophilus_harrisii
ENSGACG00000016333	-	99	39.669	ENSSFOG00015021743	-	99	36.326	Scleropages_formosus
ENSGACG00000016333	-	100	62.198	ENSSMAG00000007062	-	99	56.461	Scophthalmus_maximus
ENSGACG00000016333	-	60	61.281	ENSSDUG00000023775	-	97	61.667	Seriola_dumerili
ENSGACG00000016333	-	100	66.667	ENSSLDG00000006836	-	96	66.667	Seriola_lalandi_dorsalis
ENSGACG00000016333	-	100	63.836	ENSSPAG00000003972	-	97	59.831	Stegastes_partitus
ENSGACG00000016333	-	63	39.615	ENSSSCG00000012730	AFF2	59	38.846	Sus_scrofa
ENSGACG00000016333	-	51	38.406	ENSSSCG00000014291	AFF4	68	36.739	Sus_scrofa
ENSGACG00000016333	-	52	62.687	ENSSSCG00000023593	AFF1	85	58.209	Sus_scrofa
ENSGACG00000016333	-	96	32.383	ENSTGUG00000002726	AFF1	70	35.142	Taeniopygia_guttata
ENSGACG00000016333	-	99	34.511	ENSTGUG00000000187	AFF4	70	36.709	Taeniopygia_guttata
ENSGACG00000016333	-	99	56.712	ENSTRUG00000014005	-	99	53.719	Takifugu_rubripes
ENSGACG00000016333	-	99	53.543	ENSTNIG00000007537	-	99	49.346	Tetraodon_nigroviridis
ENSGACG00000016333	-	100	34.328	ENSTBEG00000007536	AFF1	99	31.062	Tupaia_belangeri
ENSGACG00000016333	-	59	30.141	ENSTTRG00000005595	AFF1	99	31.373	Tursiops_truncatus
ENSGACG00000016333	-	100	32.869	ENSVVUG00000028696	AFF3	76	33.550	Vulpes_vulpes
ENSGACG00000016333	-	51	38.406	ENSVVUG00000024524	AFF4	68	36.383	Vulpes_vulpes
ENSGACG00000016333	-	99	30.198	ENSXETG00000019630	aff2	69	31.298	Xenopus_tropicalis
ENSGACG00000016333	-	96	51.124	ENSXCOG00000001869	-	98	48.762	Xiphophorus_couchianus
ENSGACG00000016333	-	99	55.435	ENSXMAG00000004657	-	99	48.590	Xiphophorus_maculatus