EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000016563 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6718 bases
Position: chrgroupIII:10874901-10881618
Accession: ZDB-GENE-040426-2159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000021873	KH_1	PF00013.29	2.4e-63	1	4
ENSGACP00000021873	KH_1	PF00013.29	2.4e-63	2	4
ENSGACP00000021873	KH_1	PF00013.29	2.4e-63	3	4
ENSGACP00000021873	KH_1	PF00013.29	2.4e-63	4	4
ENSGACP00000021873	KH_2	PF07650.17	3.3e-17	1	1
ENSGACP00000021873	DUF1897	PF09005.10	3.6e-11	1	2
ENSGACP00000021873	DUF1897	PF09005.10	3.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000021914	-	2232	-	ENSGACP00000021873	639 (aa)	-	G3PW84

Gene Model

Click here to download ENSGACG00000016563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000016563	fubp1	97	53.427	ENSGACG00000018990	khsrp	89	54.180
ENSGACG00000016563	fubp1	50	39.437	ENSGACG00000002664	-	50	39.437
ENSGACG00000016563	fubp1	99	46.967	ENSGACG00000016704	fubp3	98	45.975
ENSGACG00000016563	fubp1	54	41.270	ENSGACG00000003197	pcbp2	66	41.270
ENSGACG00000016563	fubp1	94	53.364	ENSGACG00000012422	KHSRP	94	52.576
ENSGACG00000016563	fubp1	96	42.697	ENSGACG00000000957	-	96	41.369
ENSGACG00000016563	fubp1	53	32.402	ENSGACG00000005991	igf2bp2b	65	31.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016563	fubp1	70	76.096	ENSG00000162613	FUBP1	100	70.489	Homo_sapiens
ENSGACG00000016563	fubp1	99	90.187	ENSAPOG00000014845	fubp1	98	90.187	Acanthochromis_polyacanthus
ENSGACG00000016563	fubp1	70	72.234	ENSAMEG00000007372	FUBP1	100	67.947	Ailuropoda_melanoleuca
ENSGACG00000016563	fubp1	100	87.597	ENSACIG00000020024	fubp1	100	86.512	Amphilophus_citrinellus
ENSGACG00000016563	fubp1	100	90.513	ENSAPEG00000012232	fubp1	100	90.513	Amphiprion_percula
ENSGACG00000016563	fubp1	100	91.549	ENSATEG00000018619	fubp1	100	92.175	Anabas_testudineus
ENSGACG00000016563	fubp1	65	78.282	ENSAPLG00000005965	FUBP1	100	71.707	Anas_platyrhynchos
ENSGACG00000016563	fubp1	70	72.443	ENSACAG00000006310	FUBP1	96	64.986	Anolis_carolinensis
ENSGACG00000016563	fubp1	99	90.267	ENSACLG00000006708	fubp1	100	87.879	Astatotilapia_calliptera
ENSGACG00000016563	fubp1	85	85.634	ENSAMXG00000005525	fubp1	99	85.448	Astyanax_mexicanus
ENSGACG00000016563	fubp1	70	75.877	ENSCJAG00000007062	FUBP1	100	70.336	Callithrix_jacchus
ENSGACG00000016563	fubp1	70	75.877	ENSCAFG00000020361	FUBP1	100	70.336	Canis_familiaris
ENSGACG00000016563	fubp1	65	77.512	ENSTSYG00000000148	FUBP1	100	70.847	Carlito_syrichta
ENSGACG00000016563	fubp1	54	82.329	ENSCAPG00000011052	-	67	76.557	Cavia_aperea
ENSGACG00000016563	fubp1	70	75.877	ENSCPOG00000002757	FUBP1	98	70.122	Cavia_porcellus
ENSGACG00000016563	fubp1	70	61.561	ENSCCAG00000036537	FUBP1	100	61.561	Cebus_capucinus
ENSGACG00000016563	fubp1	70	76.096	ENSCATG00000042126	FUBP1	100	70.489	Cercocebus_atys
ENSGACG00000016563	fubp1	70	75.877	ENSCLAG00000005621	FUBP1	100	71.250	Chinchilla_lanigera
ENSGACG00000016563	fubp1	70	76.096	ENSCSAG00000001402	FUBP1	100	70.489	Chlorocebus_sabaeus
ENSGACG00000016563	fubp1	70	75.658	ENSCHOG00000008177	FUBP1	98	70.444	Choloepus_hoffmanni
ENSGACG00000016563	fubp1	70	76.940	ENSCGRG00001007103	Fubp1	100	70.706	Cricetulus_griseus_chok1gshd
ENSGACG00000016563	fubp1	65	77.644	ENSCGRG00000003372	Fubp1	100	70.665	Cricetulus_griseus_crigri
ENSGACG00000016563	fubp1	100	90.328	ENSCSEG00000021412	fubp1	100	90.172	Cynoglossus_semilaevis
ENSGACG00000016563	fubp1	99	87.994	ENSCVAG00000014487	fubp1	96	90.088	Cyprinodon_variegatus
ENSGACG00000016563	fubp1	100	78.201	ENSDARG00000029248	fubp1	100	79.878	Danio_rerio
ENSGACG00000016563	fubp1	83	55.205	ENSDNOG00000034565	-	73	57.143	Dasypus_novemcinctus
ENSGACG00000016563	fubp1	70	76.316	ENSDORG00000016534	Fubp1	98	70.138	Dipodomys_ordii
ENSGACG00000016563	fubp1	75	75.145	ENSETEG00000000948	-	58	75.510	Echinops_telfairi
ENSGACG00000016563	fubp1	67	69.091	ENSEBUG00000016143	fubp1	58	53.947	Eptatretus_burgeri
ENSGACG00000016563	fubp1	68	82.550	ENSEEUG00000001287	FUBP1	88	68.889	Erinaceus_europaeus
ENSGACG00000016563	fubp1	100	82.362	ENSELUG00000007990	fubp1	100	82.212	Esox_lucius
ENSGACG00000016563	fubp1	70	76.805	ENSFALG00000005768	FUBP1	97	71.057	Ficedula_albicollis
ENSGACG00000016563	fubp1	70	75.658	ENSFDAG00000014210	FUBP1	100	69.333	Fukomys_damarensis
ENSGACG00000016563	fubp1	100	89.984	ENSFHEG00000005230	fubp1	100	90.610	Fundulus_heteroclitus
ENSGACG00000016563	fubp1	100	86.385	ENSGMOG00000003370	fubp1	100	86.072	Gadus_morhua
ENSGACG00000016563	fubp1	70	77.293	ENSGALG00000008939	FUBP1	100	71.799	Gallus_gallus
ENSGACG00000016563	fubp1	100	88.462	ENSGAFG00000020972	fubp1	100	89.077	Gambusia_affinis
ENSGACG00000016563	fubp1	100	89.058	ENSHBUG00000009835	fubp1	100	88.939	Haplochromis_burtoni
ENSGACG00000016563	fubp1	71	71.828	ENSHGLG00000002808	-	100	64.231	Heterocephalus_glaber_female
ENSGACG00000016563	fubp1	70	75.877	ENSHGLG00000008415	-	100	71.250	Heterocephalus_glaber_female
ENSGACG00000016563	fubp1	70	75.877	ENSHGLG00100003417	-	100	70.015	Heterocephalus_glaber_male
ENSGACG00000016563	fubp1	71	72.258	ENSHGLG00100001414	-	100	64.688	Heterocephalus_glaber_male
ENSGACG00000016563	fubp1	100	86.718	ENSHCOG00000000910	fubp1	100	87.939	Hippocampus_comes
ENSGACG00000016563	fubp1	100	77.364	ENSIPUG00000009896	fubp1	100	78.915	Ictalurus_punctatus
ENSGACG00000016563	fubp1	70	76.821	ENSSTOG00000014312	FUBP1	100	70.336	Ictidomys_tridecemlineatus
ENSGACG00000016563	fubp1	70	76.770	ENSJJAG00000020069	Fubp1	100	70.167	Jaculus_jaculus
ENSGACG00000016563	fubp1	100	90.297	ENSKMAG00000018897	fubp1	100	90.297	Kryptolebias_marmoratus
ENSGACG00000016563	fubp1	99	88.905	ENSLBEG00000012700	fubp1	97	88.905	Labrus_bergylta
ENSGACG00000016563	fubp1	98	77.027	ENSLOCG00000003745	fubp1	99	76.788	Lepisosteus_oculatus
ENSGACG00000016563	fubp1	70	72.842	ENSLAFG00000003273	FUBP1	99	72.242	Loxodonta_africana
ENSGACG00000016563	fubp1	70	76.096	ENSMFAG00000031825	FUBP1	100	70.489	Macaca_fascicularis
ENSGACG00000016563	fubp1	70	77.042	ENSMMUG00000002899	FUBP1	100	70.489	Macaca_mulatta
ENSGACG00000016563	fubp1	70	76.096	ENSMNEG00000045212	FUBP1	100	70.489	Macaca_nemestrina
ENSGACG00000016563	fubp1	99	87.406	ENSMAMG00000007489	fubp1	99	87.743	Mastacembelus_armatus
ENSGACG00000016563	fubp1	100	90.297	ENSMZEG00005024298	fubp1	100	89.828	Maylandia_zebra
ENSGACG00000016563	fubp1	65	78.333	ENSMGAG00000009424	FUBP1	100	72.006	Meleagris_gallopavo
ENSGACG00000016563	fubp1	70	76.096	ENSMAUG00000016428	Fubp1	98	70.274	Mesocricetus_auratus
ENSGACG00000016563	fubp1	70	76.821	ENSMOCG00000014751	Fubp1	100	70.968	Microtus_ochrogaster
ENSGACG00000016563	fubp1	87	93.490	ENSMMOG00000019463	fubp1	99	92.405	Mola_mola
ENSGACG00000016563	fubp1	67	70.667	ENSMODG00000020804	FUBP1	100	65.941	Monodelphis_domestica
ENSGACG00000016563	fubp1	100	90.923	ENSMALG00000015173	fubp1	100	90.610	Monopterus_albus
ENSGACG00000016563	fubp1	70	76.327	MGP_CAROLIEiJ_G0025740	Fubp1	99	73.055	Mus_caroli
ENSGACG00000016563	fubp1	70	76.106	ENSMUSG00000028034	Fubp1	99	72.865	Mus_musculus
ENSGACG00000016563	fubp1	70	76.159	MGP_PahariEiJ_G0027191	Fubp1	99	72.917	Mus_pahari
ENSGACG00000016563	fubp1	70	76.327	MGP_SPRETEiJ_G0026693	Fubp1	99	73.055	Mus_spretus
ENSGACG00000016563	fubp1	70	72.083	ENSMLUG00000014802	FUBP1	100	67.353	Myotis_lucifugus
ENSGACG00000016563	fubp1	70	73.171	ENSNGAG00000014302	Fubp1	100	68.098	Nannospalax_galili
ENSGACG00000016563	fubp1	100	88.732	ENSNBRG00000015099	fubp1	100	87.656	Neolamprologus_brichardi
ENSGACG00000016563	fubp1	70	73.753	ENSNLEG00000009772	FUBP1	100	68.892	Nomascus_leucogenys
ENSGACG00000016563	fubp1	69	88.679	ENSOPRG00000001175	FUBP1	98	59.692	Ochotona_princeps
ENSGACG00000016563	fubp1	99	52.795	ENSODEG00000003657	-	99	51.558	Octodon_degus
ENSGACG00000016563	fubp1	70	75.877	ENSODEG00000002600	-	100	69.333	Octodon_degus
ENSGACG00000016563	fubp1	99	89.720	ENSONIG00000018381	fubp1	99	89.875	Oreochromis_niloticus
ENSGACG00000016563	fubp1	60	78.238	ENSOANG00000009777	FUBP1	99	65.584	Ornithorhynchus_anatinus
ENSGACG00000016563	fubp1	99	87.127	ENSORLG00000003540	fubp1	99	86.185	Oryzias_latipes
ENSGACG00000016563	fubp1	99	87.284	ENSORLG00020005908	fubp1	99	86.656	Oryzias_latipes_hni
ENSGACG00000016563	fubp1	100	88.354	ENSORLG00015008779	fubp1	100	88.199	Oryzias_latipes_hsok
ENSGACG00000016563	fubp1	100	87.011	ENSOMEG00000021943	fubp1	100	86.385	Oryzias_melastigma
ENSGACG00000016563	fubp1	70	71.933	ENSOGAG00000014233	FUBP1	100	67.548	Otolemur_garnettii
ENSGACG00000016563	fubp1	70	75.877	ENSOARG00000013259	FUBP1	100	67.699	Ovis_aries
ENSGACG00000016563	fubp1	70	75.877	ENSPPRG00000000413	FUBP1	100	70.336	Panthera_pardus
ENSGACG00000016563	fubp1	70	75.877	ENSPTIG00000019450	FUBP1	100	70.336	Panthera_tigris_altaica
ENSGACG00000016563	fubp1	66	76.526	ENSPSIG00000012965	FUBP1	100	71.108	Pelodiscus_sinensis
ENSGACG00000016563	fubp1	99	82.609	ENSPMGG00000009060	fubp1	99	81.677	Periophthalmus_magnuspinnatus
ENSGACG00000016563	fubp1	70	76.718	ENSPEMG00000021802	Fubp1	99	69.799	Peromyscus_maniculatus_bairdii
ENSGACG00000016563	fubp1	62	55.274	ENSPMAG00000001644	-	93	57.205	Petromyzon_marinus
ENSGACG00000016563	fubp1	100	88.636	ENSPFOG00000000238	fubp1	100	85.380	Poecilia_formosa
ENSGACG00000016563	fubp1	100	88.263	ENSPLAG00000021170	fubp1	100	87.656	Poecilia_latipinna
ENSGACG00000016563	fubp1	99	89.168	ENSPMEG00000004747	fubp1	100	88.424	Poecilia_mexicana
ENSGACG00000016563	fubp1	99	90.267	ENSPREG00000017911	fubp1	99	94.019	Poecilia_reticulata
ENSGACG00000016563	fubp1	72	75.319	ENSPPYG00000001219	-	68	76.821	Pongo_abelii
ENSGACG00000016563	fubp1	70	75.824	ENSPCAG00000012617	FUBP1	98	70.245	Procavia_capensis
ENSGACG00000016563	fubp1	70	76.316	ENSPCOG00000024974	FUBP1	100	70.336	Propithecus_coquereli
ENSGACG00000016563	fubp1	100	90.297	ENSPNYG00000004552	fubp1	100	89.828	Pundamilia_nyererei
ENSGACG00000016563	fubp1	100	81.194	ENSPNAG00000016207	fubp1	100	83.358	Pygocentrus_nattereri
ENSGACG00000016563	fubp1	70	76.264	ENSRNOG00000043370	Fubp1	100	70.444	Rattus_norvegicus
ENSGACG00000016563	fubp1	70	76.096	ENSRBIG00000042950	FUBP1	100	70.489	Rhinopithecus_bieti
ENSGACG00000016563	fubp1	70	76.096	ENSRROG00000043534	FUBP1	100	70.489	Rhinopithecus_roxellana
ENSGACG00000016563	fubp1	70	75.877	ENSSBOG00000027299	FUBP1	98	73.148	Saimiri_boliviensis_boliviensis
ENSGACG00000016563	fubp1	65	76.429	ENSSHAG00000005367	FUBP1	99	72.924	Sarcophilus_harrisii
ENSGACG00000016563	fubp1	99	80.157	ENSSFOG00015010213	fubp1	99	80.335	Scleropages_formosus
ENSGACG00000016563	fubp1	100	83.309	ENSSMAG00000012029	fubp1	98	87.463	Scophthalmus_maximus
ENSGACG00000016563	fubp1	99	90.586	ENSSDUG00000007383	fubp1	98	89.568	Seriola_dumerili
ENSGACG00000016563	fubp1	100	90.615	ENSSLDG00000022863	fubp1	98	91.231	Seriola_lalandi_dorsalis
ENSGACG00000016563	fubp1	70	85.393	ENSSARG00000011730	FUBP1	55	86.364	Sorex_araneus
ENSGACG00000016563	fubp1	99	66.122	ENSSPUG00000008389	FUBP1	100	64.368	Sphenodon_punctatus
ENSGACG00000016563	fubp1	99	93.407	ENSSPAG00000010161	fubp1	99	93.407	Stegastes_partitus
ENSGACG00000016563	fubp1	65	78.014	ENSTGUG00000006841	FUBP1	100	71.567	Taeniopygia_guttata
ENSGACG00000016563	fubp1	100	83.333	ENSTRUG00000004615	fubp1	100	83.187	Takifugu_rubripes
ENSGACG00000016563	fubp1	55	90.625	ENSTNIG00000019815	-	95	90.625	Tetraodon_nigroviridis
ENSGACG00000016563	fubp1	78	84.118	ENSTBEG00000017333	FUBP1	62	85.030	Tupaia_belangeri
ENSGACG00000016563	fubp1	70	75.877	ENSTTRG00000000096	FUBP1	98	70.138	Tursiops_truncatus
ENSGACG00000016563	fubp1	70	75.877	ENSVPAG00000004709	FUBP1	99	70.138	Vicugna_pacos
ENSGACG00000016563	fubp1	100	84.194	ENSXCOG00000019354	fubp1	100	83.307	Xiphophorus_couchianus
ENSGACG00000016563	fubp1	97	88.103	ENSXMAG00000007168	fubp1	99	92.897	Xiphophorus_maculatus