EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000016639 (Gene tree)
Gene ID: -
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4925 bases
Position: chrgroupIII:11084230-11089154
Accession: ZDB-GENE-050522-555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000021966	MMR_HSR1	PF01926.23	1.3e-06	1	1
ENSGACP00000021965	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022007	-	797	-	ENSGACP00000021966	217 (aa)	-	G3PWH7
ENSGACT00000022006	-	879	-	ENSGACP00000021965	244 (aa)	-	G3PWH6

Gene Model

Click here to download ENSGACG00000016639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000016639	rab12	79	45.349	ENSGACG00000012006	rab30	92	43.850
ENSGACG00000016639	rab12	78	36.932	ENSGACG00000003726	rab6ba	80	36.932
ENSGACG00000016639	rab12	76	35.119	ENSGACG00000014578	RAB9A	84	35.119
ENSGACG00000016639	rab12	73	35.220	ENSGACG00000005608	rab22a	81	35.220
ENSGACG00000016639	rab12	76	36.686	ENSGACG00000010473	RAB29	87	35.912
ENSGACG00000016639	rab12	70	34.810	ENSGACG00000011190	rab34a	76	30.882
ENSGACG00000016639	rab12	84	39.614	ENSGACG00000013548	rab35b	99	39.614
ENSGACG00000016639	rab12	83	38.725	ENSGACG00000013249	rab25b	94	38.725
ENSGACG00000016639	rab12	72	30.247	ENSGACG00000011661	kras	88	30.636
ENSGACG00000016639	rab12	78	37.870	ENSGACG00000017153	rab41	78	37.870
ENSGACG00000016639	rab12	85	44.712	ENSGACG00000019642	-	99	44.712
ENSGACG00000016639	rab12	84	39.048	ENSGACG00000004965	rab25a	97	39.048
ENSGACG00000016639	rab12	82	37.989	ENSGACG00000016164	rab4a	92	35.784
ENSGACG00000016639	rab12	83	37.264	ENSGACG00000013297	-	94	37.264
ENSGACG00000016639	rab12	72	36.420	ENSGACG00000006151	rab23	74	35.000
ENSGACG00000016639	rab12	85	42.466	ENSGACG00000013401	zgc:171927	99	42.466
ENSGACG00000016639	rab12	76	37.278	ENSGACG00000009647	RAB7A	81	37.278
ENSGACG00000016639	rab12	77	42.857	ENSGACG00000014905	rab2a	93	40.704
ENSGACG00000016639	rab12	80	32.044	ENSGACG00000020514	rab34b	70	32.044
ENSGACG00000016639	rab12	82	37.799	ENSGACG00000001950	RAB39B	97	37.799
ENSGACG00000016639	rab12	53	30.579	ENSGACG00000011497	arfrp1	59	30.579
ENSGACG00000016639	rab12	73	39.877	ENSGACG00000018745	rab33a	69	39.877
ENSGACG00000016639	rab12	76	31.138	ENSGACG00000016680	rheb	89	31.138
ENSGACG00000016639	rab12	79	46.243	ENSGACG00000001694	rab18a	86	44.809
ENSGACG00000016639	rab12	79	44.444	ENSGACG00000007722	rab15	90	47.020
ENSGACG00000016639	rab12	76	38.788	ENSGACG00000013611	-	81	38.554
ENSGACG00000016639	rab12	73	36.250	ENSGACG00000005397	si:ch211-247i17.1	91	36.250
ENSGACG00000016639	rab12	80	42.935	ENSGACG00000005979	RAB15	88	42.935
ENSGACG00000016639	rab12	82	37.634	ENSGACG00000011607	rab32b	82	36.757
ENSGACG00000016639	rab12	77	30.899	ENSGACG00000018711	rasl11a	72	30.899
ENSGACG00000016639	rab12	77	35.465	ENSGACG00000001725	zgc:101559	73	35.465
ENSGACG00000016639	rab12	76	31.737	ENSGACG00000000729	rhebl1	89	31.737
ENSGACG00000016639	rab12	83	36.946	ENSGACG00000006162	-	90	36.946
ENSGACG00000016639	rab12	81	40.556	ENSGACG00000015479	rab11bb	82	40.556
ENSGACG00000016639	rab12	77	38.690	ENSGACG00000008659	rab5c	90	34.826
ENSGACG00000016639	rab12	80	47.126	ENSGACG00000016395	rab18b	94	44.554
ENSGACG00000016639	rab12	81	51.124	ENSGACG00000011925	rab13	88	51.124
ENSGACG00000016639	rab12	69	34.437	ENSGACG00000004844	rras	94	33.708
ENSGACG00000016639	rab12	79	47.674	ENSGACG00000000789	rab1ba	90	45.109
ENSGACG00000016639	rab12	78	39.896	ENSGACG00000018847	-	86	39.896
ENSGACG00000016639	rab12	78	40.000	ENSGACG00000016799	-	98	40.000
ENSGACG00000016639	rab12	74	36.646	ENSGACG00000019767	-	79	36.709
ENSGACG00000016639	rab12	83	37.799	ENSGACG00000013259	rab11al	95	37.799
ENSGACG00000016639	rab12	82	33.990	ENSGACG00000018291	rab9b	96	33.990
ENSGACG00000016639	rab12	77	36.310	ENSGACG00000004997	rab5aa	77	36.310
ENSGACG00000016639	rab12	53	34.615	ENSGACG00000015645	rras2	85	31.111
ENSGACG00000016639	rab12	76	37.500	ENSGACG00000003972	rab9a	82	37.500
ENSGACG00000016639	rab12	81	39.326	ENSGACG00000019540	rab33ba	80	39.326
ENSGACG00000016639	rab12	63	30.128	ENSGACG00000007818	si:ch73-116o1.2	83	30.357
ENSGACG00000016639	rab12	94	35.961	ENSGACG00000013721	rab6bb	79	38.462
ENSGACG00000016639	rab12	78	39.053	ENSGACG00000020356	rab6a	79	39.053
ENSGACG00000016639	rab12	82	37.019	ENSGACG00000020437	-	97	37.019
ENSGACG00000016639	rab12	73	32.184	ENSGACG00000008570	rasl10a	84	32.184
ENSGACG00000016639	rab12	76	37.278	ENSGACG00000000807	-	85	36.723
ENSGACG00000016639	rab12	80	48.000	ENSGACG00000003864	rab1ab	84	48.837
ENSGACG00000016639	rab12	88	38.743	ENSGACG00000014915	si:dkey-16l2.16	80	40.462
ENSGACG00000016639	rab12	73	35.185	ENSGACG00000014678	rab36	68	34.807

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016639	rab12	90	85.644	ENSG00000206418	RAB12	91	80.631	Homo_sapiens
ENSGACG00000016639	rab12	88	78.680	ENSAMEG00000007452	RAB12	85	78.680	Ailuropoda_melanoleuca
ENSGACG00000016639	rab12	100	90.868	ENSACIG00000020616	rab12	90	92.694	Amphilophus_citrinellus
ENSGACG00000016639	rab12	100	91.743	ENSAOCG00000002130	rab12	90	92.661	Amphiprion_ocellaris
ENSGACG00000016639	rab12	100	91.743	ENSAPEG00000013255	rab12	90	92.661	Amphiprion_percula
ENSGACG00000016639	rab12	100	93.548	ENSATEG00000019683	rab12	90	93.548	Anabas_testudineus
ENSGACG00000016639	rab12	88	86.294	ENSACAG00000003360	RAB12	78	85.572	Anolis_carolinensis
ENSGACG00000016639	rab12	100	93.119	ENSACLG00000007696	rab12	97	87.712	Astatotilapia_calliptera
ENSGACG00000016639	rab12	100	85.520	ENSAMXG00000004882	rab12	90	86.878	Astyanax_mexicanus
ENSGACG00000016639	rab12	90	86.139	ENSBTAG00000010356	RAB12	82	86.070	Bos_taurus
ENSGACG00000016639	rab12	100	81.614	ENSCJAG00000015468	RAB12	66	81.614	Callithrix_jacchus
ENSGACG00000016639	rab12	90	85.644	ENSCAFG00020023721	RAB12	76	80.631	Canis_lupus_dingo
ENSGACG00000016639	rab12	90	86.139	ENSCHIG00000016103	RAB12	82	86.070	Capra_hircus
ENSGACG00000016639	rab12	84	86.170	ENSCPOG00000022689	RAB12	96	80.597	Cavia_porcellus
ENSGACG00000016639	rab12	100	81.614	ENSCCAG00000022862	RAB12	91	81.614	Cebus_capucinus
ENSGACG00000016639	rab12	90	85.644	ENSCATG00000037784	RAB12	83	85.572	Cercocebus_atys
ENSGACG00000016639	rab12	90	85.644	ENSCSAG00000017569	RAB12	58	85.572	Chlorocebus_sabaeus
ENSGACG00000016639	rab12	100	79.821	ENSCPBG00000028375	RAB12	91	79.821	Chrysemys_picta_bellii
ENSGACG00000016639	rab12	88	85.787	ENSCANG00000031453	RAB12	90	85.787	Colobus_angolensis_palliatus
ENSGACG00000016639	rab12	100	80.717	ENSCGRG00001006958	Rab12	69	85.075	Cricetulus_griseus_chok1gshd
ENSGACG00000016639	rab12	100	91.284	ENSCSEG00000016933	rab12	90	92.202	Cynoglossus_semilaevis
ENSGACG00000016639	rab12	100	89.140	ENSCVAG00000003539	rab12	97	85.356	Cyprinodon_variegatus
ENSGACG00000016639	rab12	100	84.793	ENSDARG00000089428	rab12	89	84.332	Danio_rerio
ENSGACG00000016639	rab12	90	85.644	ENSDORG00000008920	Rab12	89	85.572	Dipodomys_ordii
ENSGACG00000016639	rab12	86	65.591	ENSEBUG00000006581	rab12	87	67.039	Eptatretus_burgeri
ENSGACG00000016639	rab12	90	85.644	ENSEASG00005002926	RAB12	76	80.717	Equus_asinus_asinus
ENSGACG00000016639	rab12	90	85.644	ENSECAG00000007384	RAB12	65	80.717	Equus_caballus
ENSGACG00000016639	rab12	100	88.479	ENSELUG00000007123	rab12	100	79.424	Esox_lucius
ENSGACG00000016639	rab12	90	85.644	ENSFCAG00000027710	RAB12	65	80.631	Felis_catus
ENSGACG00000016639	rab12	100	89.091	ENSFHEG00000004319	rab12	97	84.874	Fundulus_heteroclitus
ENSGACG00000016639	rab12	97	91.469	ENSGMOG00000012335	rab12	99	84.232	Gadus_morhua
ENSGACG00000016639	rab12	92	83.981	ENSGALG00000033608	RAB12	80	85.075	Gallus_gallus
ENSGACG00000016639	rab12	100	79.821	ENSGAGG00000007278	RAB12	91	79.821	Gopherus_agassizii
ENSGACG00000016639	rab12	100	93.119	ENSHBUG00000008497	rab12	97	87.712	Haplochromis_burtoni
ENSGACG00000016639	rab12	89	84.925	ENSHGLG00000006189	RAB12	78	84.925	Heterocephalus_glaber_female
ENSGACG00000016639	rab12	100	88.991	ENSHCOG00000012376	rab12	90	88.532	Hippocampus_comes
ENSGACG00000016639	rab12	90	90.816	ENSIPUG00000017401	rab12	90	84.932	Ictalurus_punctatus
ENSGACG00000016639	rab12	88	85.279	ENSSTOG00000025122	RAB12	87	85.279	Ictidomys_tridecemlineatus
ENSGACG00000016639	rab12	90	85.644	ENSJJAG00000019064	Rab12	88	85.572	Jaculus_jaculus
ENSGACG00000016639	rab12	99	92.093	ENSKMAG00000020056	rab12	89	90.698	Kryptolebias_marmoratus
ENSGACG00000016639	rab12	100	93.088	ENSLBEG00000013756	rab12	97	86.383	Labrus_bergylta
ENSGACG00000016639	rab12	90	88.776	ENSLACG00000010461	RAB12	89	82.432	Latimeria_chalumnae
ENSGACG00000016639	rab12	100	85.520	ENSLOCG00000002680	rab12	89	85.520	Lepisosteus_oculatus
ENSGACG00000016639	rab12	90	85.644	ENSMFAG00000043551	RAB12	82	85.572	Macaca_fascicularis
ENSGACG00000016639	rab12	90	85.644	ENSMNEG00000040853	RAB12	79	85.572	Macaca_nemestrina
ENSGACG00000016639	rab12	100	92.627	ENSMAMG00000006862	rab12	90	92.627	Mastacembelus_armatus
ENSGACG00000016639	rab12	100	93.119	ENSMZEG00005024316	rab12	97	87.712	Maylandia_zebra
ENSGACG00000016639	rab12	82	85.714	ENSMGAG00000009197	RAB12	96	80.000	Meleagris_gallopavo
ENSGACG00000016639	rab12	100	80.717	ENSMAUG00000008371	Rab12	75	80.269	Mesocricetus_auratus
ENSGACG00000016639	rab12	90	85.149	ENSMICG00000030661	RAB12	90	83.256	Microcebus_murinus
ENSGACG00000016639	rab12	88	85.279	ENSMOCG00000000452	Rab12	96	80.000	Microtus_ochrogaster
ENSGACG00000016639	rab12	92	84.466	ENSMODG00000021452	RAB12	59	85.572	Monodelphis_domestica
ENSGACG00000016639	rab12	100	91.244	ENSMALG00000015762	rab12	90	91.244	Monopterus_albus
ENSGACG00000016639	rab12	100	81.166	MGP_CAROLIEiJ_G0021839	Rab12	76	80.717	Mus_caroli
ENSGACG00000016639	rab12	100	81.166	ENSMUSG00000023460	Rab12	83	86.070	Mus_musculus
ENSGACG00000016639	rab12	100	81.166	MGP_PahariEiJ_G0020826	Rab12	83	86.070	Mus_pahari
ENSGACG00000016639	rab12	100	81.166	MGP_SPRETEiJ_G0022750	Rab12	76	80.717	Mus_spretus
ENSGACG00000016639	rab12	100	81.166	ENSMLUG00000002883	RAB12	83	85.572	Myotis_lucifugus
ENSGACG00000016639	rab12	94	82.938	ENSNGAG00000024103	-	86	85.572	Nannospalax_galili
ENSGACG00000016639	rab12	90	74.257	ENSNGAG00000019722	-	81	74.129	Nannospalax_galili
ENSGACG00000016639	rab12	100	93.119	ENSNBRG00000014428	rab12	97	87.712	Neolamprologus_brichardi
ENSGACG00000016639	rab12	100	80.631	ENSNLEG00000006939	RAB12	91	80.631	Nomascus_leucogenys
ENSGACG00000016639	rab12	100	80.804	ENSMEUG00000000493	RAB12	82	85.572	Notamacropus_eugenii
ENSGACG00000016639	rab12	88	86.294	ENSODEG00000006414	RAB12	96	80.952	Octodon_degus
ENSGACG00000016639	rab12	100	93.119	ENSONIG00000018469	rab12	97	87.712	Oreochromis_niloticus
ENSGACG00000016639	rab12	100	93.548	ENSORLG00000003902	rab12	90	93.548	Oryzias_latipes
ENSGACG00000016639	rab12	100	94.009	ENSORLG00020005131	rab12	98	89.565	Oryzias_latipes_hni
ENSGACG00000016639	rab12	100	93.088	ENSORLG00015007869	rab12	97	86.383	Oryzias_latipes_hsok
ENSGACG00000016639	rab12	100	93.548	ENSOMEG00000008191	rab12	97	87.234	Oryzias_melastigma
ENSGACG00000016639	rab12	84	86.170	ENSOGAG00000028002	RAB12	95	80.597	Otolemur_garnettii
ENSGACG00000016639	rab12	84	86.170	ENSOARG00000000728	RAB12	79	84.974	Ovis_aries
ENSGACG00000016639	rab12	83	85.946	ENSPPAG00000009152	RAB12	93	80.711	Pan_paniscus
ENSGACG00000016639	rab12	90	85.644	ENSPPRG00000024521	RAB12	91	80.631	Panthera_pardus
ENSGACG00000016639	rab12	90	85.644	ENSPTRG00000009853	RAB12	91	80.631	Pan_troglodytes
ENSGACG00000016639	rab12	90	86.139	ENSPANG00000009320	RAB12	81	86.070	Papio_anubis
ENSGACG00000016639	rab12	97	90.094	ENSPKIG00000008579	rab12	92	87.444	Paramormyrops_kingsleyae
ENSGACG00000016639	rab12	100	88.479	ENSPMGG00000001890	rab12	90	88.479	Periophthalmus_magnuspinnatus
ENSGACG00000016639	rab12	100	81.166	ENSPEMG00000021032	Rab12	69	85.572	Peromyscus_maniculatus_bairdii
ENSGACG00000016639	rab12	100	80.804	ENSPCIG00000010453	RAB12	50	85.572	Phascolarctos_cinereus
ENSGACG00000016639	rab12	100	91.324	ENSPFOG00000001579	rab12	90	91.324	Poecilia_formosa
ENSGACG00000016639	rab12	100	91.324	ENSPLAG00000013594	rab12	90	91.324	Poecilia_latipinna
ENSGACG00000016639	rab12	100	91.324	ENSPMEG00000010417	rab12	90	91.324	Poecilia_mexicana
ENSGACG00000016639	rab12	100	91.324	ENSPREG00000017487	rab12	90	91.781	Poecilia_reticulata
ENSGACG00000016639	rab12	90	85.644	ENSPPYG00000009015	-	65	80.631	Pongo_abelii
ENSGACG00000016639	rab12	90	85.644	ENSPCAG00000015007	RAB12	91	80.180	Procavia_capensis
ENSGACG00000016639	rab12	90	85.644	ENSPCOG00000019816	RAB12	91	80.631	Propithecus_coquereli
ENSGACG00000016639	rab12	90	85.149	ENSPVAG00000002757	RAB12	91	80.180	Pteropus_vampyrus
ENSGACG00000016639	rab12	100	93.119	ENSPNYG00000023905	rab12	97	87.712	Pundamilia_nyererei
ENSGACG00000016639	rab12	100	93.119	ENSPNYG00000005654	rab12	97	87.712	Pundamilia_nyererei
ENSGACG00000016639	rab12	100	84.615	ENSPNAG00000015031	rab12	90	85.973	Pygocentrus_nattereri
ENSGACG00000016639	rab12	97	82.160	ENSRNOG00000019295	Rab12	82	83.663	Rattus_norvegicus
ENSGACG00000016639	rab12	90	85.644	ENSRBIG00000028760	RAB12	86	85.572	Rhinopithecus_bieti
ENSGACG00000016639	rab12	90	85.644	ENSRROG00000019249	RAB12	84	85.572	Rhinopithecus_roxellana
ENSGACG00000016639	rab12	94	79.904	ENSSBOG00000021125	RAB12	71	86.096	Saimiri_boliviensis_boliviensis
ENSGACG00000016639	rab12	96	83.886	ENSSHAG00000001489	RAB12	83	89.362	Sarcophilus_harrisii
ENSGACG00000016639	rab12	100	91.244	ENSSMAG00000012678	rab12	90	91.244	Scophthalmus_maximus
ENSGACG00000016639	rab12	100	93.548	ENSSDUG00000008505	rab12	90	93.548	Seriola_dumerili
ENSGACG00000016639	rab12	100	93.548	ENSSLDG00000022239	rab12	90	93.548	Seriola_lalandi_dorsalis
ENSGACG00000016639	rab12	96	84.186	ENSSPUG00000003222	RAB12	87	84.186	Sphenodon_punctatus
ENSGACG00000016639	rab12	100	91.743	ENSSPAG00000010822	rab12	90	92.661	Stegastes_partitus
ENSGACG00000016639	rab12	100	81.081	ENSSSCG00000038026	RAB12	82	86.070	Sus_scrofa
ENSGACG00000016639	rab12	92	84.466	ENSTGUG00000009889	RAB12	80	85.572	Taeniopygia_guttata
ENSGACG00000016639	rab12	100	89.401	ENSTRUG00000024455	rab12	90	89.401	Takifugu_rubripes
ENSGACG00000016639	rab12	100	90.783	ENSTNIG00000014859	rab12	97	84.255	Tetraodon_nigroviridis
ENSGACG00000016639	rab12	88	85.787	ENSTTRG00000008711	RAB12	89	85.787	Tursiops_truncatus
ENSGACG00000016639	rab12	90	85.644	ENSUAMG00000018092	RAB12	91	80.631	Ursus_americanus
ENSGACG00000016639	rab12	89	84.925	ENSVVUG00000011748	RAB12	90	84.925	Vulpes_vulpes
ENSGACG00000016639	rab12	100	80.531	ENSXETG00000004289	rab12	65	86.634	Xenopus_tropicalis
ENSGACG00000016639	rab12	100	89.498	ENSXCOG00000019310	rab12	90	89.954	Xiphophorus_couchianus
ENSGACG00000016639	rab12	100	89.498	ENSXMAG00000023617	rab12	90	89.954	Xiphophorus_maculatus