EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000016694 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 34567 bases
Position: chrgroupII:17411270-17445836
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022042	ResIII	PF04851.15	9.1e-06	1	1
ENSGACP00000022042	BRK	PF07533.16	7.7e-32	1	2
ENSGACP00000022042	BRK	PF07533.16	7.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022084	-	7161	-	ENSGACP00000022042	2386 (aa)	-	G3PWQ3

Gene Model

Click here to download ENSGACG00000016694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000016694	chd9	82	60.757	ENSGACG00000000037	chd6	72	61.669
ENSGACG00000016694	chd9	67	61.164	ENSGACG00000014096	chd8	78	61.475

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016694	chd9	68	74.802	ENSG00000177200	CHD9	97	67.310	Homo_sapiens
ENSGACG00000016694	chd9	97	91.304	ENSAPOG00000023034	chd9	96	87.138	Acanthochromis_polyacanthus
ENSGACG00000016694	chd9	96	75.183	ENSAMEG00000016232	CHD9	81	67.432	Ailuropoda_melanoleuca
ENSGACG00000016694	chd9	97	91.182	ENSAPEG00000009859	chd9	96	87.293	Amphiprion_percula
ENSGACG00000016694	chd9	96	76.413	ENSAPLG00000002826	CHD9	81	68.319	Anas_platyrhynchos
ENSGACG00000016694	chd9	68	76.095	ENSACAG00000016150	CHD9	80	67.406	Anolis_carolinensis
ENSGACG00000016694	chd9	97	74.153	ENSANAG00000015630	CHD9	98	67.133	Aotus_nancymaae
ENSGACG00000016694	chd9	97	88.841	ENSACLG00000016899	chd9	83	84.114	Astatotilapia_calliptera
ENSGACG00000016694	chd9	96	75.214	ENSBTAG00000002287	CHD9	79	68.340	Bos_taurus
ENSGACG00000016694	chd9	96	75.214	ENSCAFG00000009699	CHD9	79	68.737	Canis_familiaris
ENSGACG00000016694	chd9	96	75.214	ENSCAFG00020002879	CHD9	91	67.832	Canis_lupus_dingo
ENSGACG00000016694	chd9	96	74.619	ENSTSYG00000007693	CHD9	98	67.483	Carlito_syrichta
ENSGACG00000016694	chd9	85	60.423	ENSCAPG00000011604	CHD9	71	60.619	Cavia_aperea
ENSGACG00000016694	chd9	93	70.739	ENSCPOG00000036544	CHD9	78	64.860	Cavia_porcellus
ENSGACG00000016694	chd9	97	74.334	ENSCCAG00000036178	CHD9	98	68.182	Cebus_capucinus
ENSGACG00000016694	chd9	68	74.924	ENSCATG00000036753	CHD9	98	67.832	Cercocebus_atys
ENSGACG00000016694	chd9	96	74.574	ENSCLAG00000007137	CHD9	94	80.843	Chinchilla_lanigera
ENSGACG00000016694	chd9	68	74.863	ENSCSAG00000005311	CHD9	79	68.370	Chlorocebus_sabaeus
ENSGACG00000016694	chd9	67	80.769	ENSCHOG00000003935	CHD9	54	90.026	Choloepus_hoffmanni
ENSGACG00000016694	chd9	88	81.852	ENSCPBG00000012459	CHD9	78	81.791	Chrysemys_picta_bellii
ENSGACG00000016694	chd9	68	74.924	ENSCANG00000030349	CHD9	98	67.832	Colobus_angolensis_palliatus
ENSGACG00000016694	chd9	68	74.480	ENSCGRG00001016150	Chd9	81	66.639	Cricetulus_griseus_chok1gshd
ENSGACG00000016694	chd9	68	74.480	ENSCGRG00000012850	Chd9	94	80.217	Cricetulus_griseus_crigri
ENSGACG00000016694	chd9	80	76.285	ENSDORG00000008523	-	94	76.447	Dipodomys_ordii
ENSGACG00000016694	chd9	83	92.063	ENSETEG00000009565	CHD9	71	91.870	Echinops_telfairi
ENSGACG00000016694	chd9	96	75.092	ENSEASG00005014832	CHD9	97	78.173	Equus_asinus_asinus
ENSGACG00000016694	chd9	93	75.153	ENSECAG00000011505	CHD9	79	68.328	Equus_caballus
ENSGACG00000016694	chd9	63	85.903	ENSEEUG00000014515	CHD9	67	83.978	Erinaceus_europaeus
ENSGACG00000016694	chd9	93	79.419	ENSELUG00000006031	chd9	96	76.509	Esox_lucius
ENSGACG00000016694	chd9	96	75.214	ENSFCAG00000022534	CHD9	91	68.182	Felis_catus
ENSGACG00000016694	chd9	96	76.217	ENSFALG00000013276	CHD9	97	67.570	Ficedula_albicollis
ENSGACG00000016694	chd9	96	74.135	ENSFDAG00000021037	CHD9	79	67.738	Fukomys_damarensis
ENSGACG00000016694	chd9	97	89.731	ENSFHEG00000006068	chd9	97	83.727	Fundulus_heteroclitus
ENSGACG00000016694	chd9	85	86.450	ENSGMOG00000006040	chd9	85	86.382	Gadus_morhua
ENSGACG00000016694	chd9	92	76.185	ENSGALG00000039178	CHD9	80	69.473	Gallus_gallus
ENSGACG00000016694	chd9	68	74.802	ENSGGOG00000014816	CHD9	91	67.483	Gorilla_gorilla
ENSGACG00000016694	chd9	69	89.146	ENSHBUG00000023322	chd9	97	85.324	Haplochromis_burtoni
ENSGACG00000016694	chd9	93	74.786	ENSHGLG00000014938	CHD9	94	80.579	Heterocephalus_glaber_female
ENSGACG00000016694	chd9	94	85.350	ENSHCOG00000000937	chd9	95	80.771	Hippocampus_comes
ENSGACG00000016694	chd9	96	74.863	ENSSTOG00000022273	CHD9	94	80.964	Ictidomys_tridecemlineatus
ENSGACG00000016694	chd9	52	76.722	ENSJJAG00000015741	-	99	66.520	Jaculus_jaculus
ENSGACG00000016694	chd9	95	89.004	ENSKMAG00000016784	chd9	96	84.726	Kryptolebias_marmoratus
ENSGACG00000016694	chd9	94	70.218	ENSLACG00000005557	CHD9	79	64.916	Latimeria_chalumnae
ENSGACG00000016694	chd9	99	74.269	ENSLOCG00000007225	chd9	97	73.904	Lepisosteus_oculatus
ENSGACG00000016694	chd9	96	74.634	ENSLAFG00000015374	CHD9	79	68.172	Loxodonta_africana
ENSGACG00000016694	chd9	93	75.814	ENSMFAG00000041354	CHD9	98	67.832	Macaca_fascicularis
ENSGACG00000016694	chd9	68	74.863	ENSMMUG00000016310	CHD9	98	67.832	Macaca_mulatta
ENSGACG00000016694	chd9	96	74.863	ENSMNEG00000031494	CHD9	80	69.902	Macaca_nemestrina
ENSGACG00000016694	chd9	68	74.924	ENSMLEG00000043219	CHD9	98	67.832	Mandrillus_leucophaeus
ENSGACG00000016694	chd9	97	88.800	ENSMAMG00000003909	chd9	81	86.317	Mastacembelus_armatus
ENSGACG00000016694	chd9	69	90.776	ENSMZEG00005006581	chd9	96	85.549	Maylandia_zebra
ENSGACG00000016694	chd9	99	64.595	ENSMGAG00000004642	CHD9	86	64.453	Meleagris_gallopavo
ENSGACG00000016694	chd9	96	74.893	ENSMICG00000016679	CHD9	91	68.182	Microcebus_murinus
ENSGACG00000016694	chd9	68	90.227	ENSMMOG00000016406	chd9	82	83.528	Mola_mola
ENSGACG00000016694	chd9	89	64.871	ENSMODG00000013142	-	96	65.421	Monodelphis_domestica
ENSGACG00000016694	chd9	97	89.599	ENSMALG00000013306	chd9	82	83.878	Monopterus_albus
ENSGACG00000016694	chd9	68	73.916	MGP_CAROLIEiJ_G0031364	Chd9	79	67.734	Mus_caroli
ENSGACG00000016694	chd9	96	73.902	ENSMUSG00000056608	Chd9	94	79.614	Mus_musculus
ENSGACG00000016694	chd9	93	73.993	MGP_PahariEiJ_G0022964	Chd9	81	65.526	Mus_pahari
ENSGACG00000016694	chd9	68	73.810	MGP_SPRETEiJ_G0032483	Chd9	79	67.464	Mus_spretus
ENSGACG00000016694	chd9	96	75.275	ENSMPUG00000003285	CHD9	81	67.187	Mustela_putorius_furo
ENSGACG00000016694	chd9	96	74.832	ENSMLUG00000004456	CHD9	81	66.488	Myotis_lucifugus
ENSGACG00000016694	chd9	97	88.217	ENSNBRG00000009423	chd9	96	85.271	Neolamprologus_brichardi
ENSGACG00000016694	chd9	68	74.802	ENSNLEG00000001026	CHD9	80	69.818	Nomascus_leucogenys
ENSGACG00000016694	chd9	68	95.489	ENSMEUG00000008222	-	69	89.172	Notamacropus_eugenii
ENSGACG00000016694	chd9	74	94.737	ENSOPRG00000011168	CHD9	66	84.225	Ochotona_princeps
ENSGACG00000016694	chd9	96	74.542	ENSODEG00000004466	CHD9	76	74.725	Octodon_degus
ENSGACG00000016694	chd9	96	76.141	ENSOANG00000013401	CHD9	79	68.974	Ornithorhynchus_anatinus
ENSGACG00000016694	chd9	93	75.076	ENSOCUG00000001016	CHD9	90	75.397	Oryctolagus_cuniculus
ENSGACG00000016694	chd9	95	86.142	ENSORLG00020020665	chd9	77	82.524	Oryzias_latipes_hni
ENSGACG00000016694	chd9	84	84.326	ENSORLG00015019126	chd9	93	84.228	Oryzias_latipes_hsok
ENSGACG00000016694	chd9	56	86.863	ENSOMEG00000015978	chd9	73	88.274	Oryzias_melastigma
ENSGACG00000016694	chd9	96	74.727	ENSOGAG00000002110	CHD9	79	67.892	Otolemur_garnettii
ENSGACG00000016694	chd9	96	75.076	ENSOARG00000017664	CHD9	79	68.115	Ovis_aries
ENSGACG00000016694	chd9	68	74.009	ENSPPAG00000039388	-	98	66.462	Pan_paniscus
ENSGACG00000016694	chd9	96	75.275	ENSPPRG00000004801	CHD9	91	67.832	Panthera_pardus
ENSGACG00000016694	chd9	96	73.748	ENSPTIG00000021854	CHD9	91	60.140	Panthera_tigris_altaica
ENSGACG00000016694	chd9	68	74.741	ENSPTRG00000008113	CHD9	91	67.483	Pan_troglodytes
ENSGACG00000016694	chd9	68	74.863	ENSPANG00000019307	CHD9	98	67.832	Papio_anubis
ENSGACG00000016694	chd9	94	77.120	ENSPKIG00000025401	-	83	69.850	Paramormyrops_kingsleyae
ENSGACG00000016694	chd9	93	81.299	ENSPKIG00000021876	chd9	94	75.865	Paramormyrops_kingsleyae
ENSGACG00000016694	chd9	57	77.770	ENSPSIG00000008099	CHD9	71	77.696	Pelodiscus_sinensis
ENSGACG00000016694	chd9	62	68.799	ENSPMAG00000006035	-	86	68.885	Petromyzon_marinus
ENSGACG00000016694	chd9	80	76.126	ENSPCIG00000017215	CHD9	94	74.921	Phascolarctos_cinereus
ENSGACG00000016694	chd9	68	74.802	ENSPPYG00000007348	CHD9	81	67.063	Pongo_abelii
ENSGACG00000016694	chd9	72	80.694	ENSPCAG00000007564	CHD9	68	80.694	Procavia_capensis
ENSGACG00000016694	chd9	96	72.511	ENSPCOG00000028433	CHD9	91	67.133	Propithecus_coquereli
ENSGACG00000016694	chd9	93	72.915	ENSPVAG00000015617	CHD9	76	72.915	Pteropus_vampyrus
ENSGACG00000016694	chd9	84	71.394	ENSRNOG00000049302	Chd9	67	80.243	Rattus_norvegicus
ENSGACG00000016694	chd9	68	74.863	ENSRBIG00000035553	CHD9	98	67.832	Rhinopithecus_bieti
ENSGACG00000016694	chd9	96	74.924	ENSRROG00000033278	CHD9	99	67.118	Rhinopithecus_roxellana
ENSGACG00000016694	chd9	97	74.274	ENSSBOG00000030240	CHD9	98	67.483	Saimiri_boliviensis_boliviensis
ENSGACG00000016694	chd9	68	74.924	ENSSHAG00000002719	CHD9	79	68.494	Sarcophilus_harrisii
ENSGACG00000016694	chd9	97	79.574	ENSSFOG00015001327	chd9	94	73.021	Scleropages_formosus
ENSGACG00000016694	chd9	95	83.079	ENSSFOG00015020209	chd9	97	75.396	Scleropages_formosus
ENSGACG00000016694	chd9	57	90.882	ENSSMAG00000008953	chd9	96	86.639	Scophthalmus_maximus
ENSGACG00000016694	chd9	68	90.954	ENSSDUG00000006139	chd9	96	87.583	Seriola_dumerili
ENSGACG00000016694	chd9	97	91.009	ENSSLDG00000017818	chd9	96	87.691	Seriola_lalandi_dorsalis
ENSGACG00000016694	chd9	90	76.347	ENSSARG00000010632	CHD9	73	76.263	Sorex_araneus
ENSGACG00000016694	chd9	84	76.017	ENSTGUG00000007476	CHD9	80	70.849	Taeniopygia_guttata
ENSGACG00000016694	chd9	97	88.746	ENSTRUG00000009125	chd9	81	83.306	Takifugu_rubripes
ENSGACG00000016694	chd9	79	68.650	ENSTNIG00000003825	chd9	88	85.646	Tetraodon_nigroviridis
ENSGACG00000016694	chd9	61	94.915	ENSTBEG00000016052	-	63	94.643	Tupaia_belangeri
ENSGACG00000016694	chd9	84	75.031	ENSTTRG00000012674	CHD9	72	68.648	Tursiops_truncatus
ENSGACG00000016694	chd9	74	73.274	ENSUAMG00000022706	CHD9	99	64.414	Ursus_americanus
ENSGACG00000016694	chd9	77	85.535	ENSUMAG00000004043	CHD9	95	85.535	Ursus_maritimus
ENSGACG00000016694	chd9	93	74.676	ENSVPAG00000001374	CHD9	76	66.911	Vicugna_pacos
ENSGACG00000016694	chd9	96	75.153	ENSVVUG00000019435	CHD9	79	68.695	Vulpes_vulpes
ENSGACG00000016694	chd9	68	74.649	ENSXETG00000000349	chd9	78	74.392	Xenopus_tropicalis