EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000016702 (Gene tree)
Gene ID: -
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt-like transcription factor 1a
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 9750 bases
Position: chrgroupII:17770795-17780544
Accession: ZDB-GENE-020228-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022052	zf-C2H2	PF00096.26	1.1e-34	1	7
ENSGACP00000022052	zf-C2H2	PF00096.26	1.1e-34	2	7
ENSGACP00000022052	zf-C2H2	PF00096.26	1.1e-34	3	7
ENSGACP00000022052	zf-C2H2	PF00096.26	1.1e-34	4	7
ENSGACP00000022052	zf-C2H2	PF00096.26	1.1e-34	5	7
ENSGACP00000022052	zf-C2H2	PF00096.26	1.1e-34	6	7
ENSGACP00000022052	zf-C2H2	PF00096.26	1.1e-34	7	7
ENSGACP00000022052	zf-met	PF12874.7	3.7e-24	1	5
ENSGACP00000022052	zf-met	PF12874.7	3.7e-24	2	5
ENSGACP00000022052	zf-met	PF12874.7	3.7e-24	3	5
ENSGACP00000022052	zf-met	PF12874.7	3.7e-24	4	5
ENSGACP00000022052	zf-met	PF12874.7	3.7e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022094	-	3921	-	ENSGACP00000022052	1306 (aa)	-	G3PWR3

Gene Model

Click here to download ENSGACG00000016702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000016702	sall1a	89	65.385	ENSGACG00000011124	sall4	99	65.385
ENSGACG00000016702	sall1a	56	48.000	ENSGACG00000018816	-	97	48.000
ENSGACG00000016702	sall1a	79	67.683	ENSGACG00000002533	sall3b	98	67.683
ENSGACG00000016702	sall1a	57	51.020	ENSGACG00000010051	-	99	51.020
ENSGACG00000016702	sall1a	65	53.061	ENSGACG00000005553	znf236	99	50.980
ENSGACG00000016702	sall1a	97	45.233	ENSGACG00000005503	sall3a	98	44.896
ENSGACG00000016702	sall1a	57	48.000	ENSGACG00000010384	-	99	48.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016702	sall1a	100	66.667	ENSG00000103449	SALL1	100	67.212	Homo_sapiens
ENSGACG00000016702	sall1a	99	91.041	ENSAPOG00000022764	sall1a	99	91.041	Acanthochromis_polyacanthus
ENSGACG00000016702	sall1a	100	66.293	ENSAMEG00000006817	SALL1	100	66.692	Ailuropoda_melanoleuca
ENSGACG00000016702	sall1a	99	89.051	ENSACIG00000004231	sall1a	99	89.051	Amphilophus_citrinellus
ENSGACG00000016702	sall1a	99	91.194	ENSAOCG00000002800	sall1a	99	91.194	Amphiprion_ocellaris
ENSGACG00000016702	sall1a	99	91.041	ENSAPEG00000010179	sall1a	99	91.041	Amphiprion_percula
ENSGACG00000016702	sall1a	100	90.742	ENSATEG00000003006	sall1a	100	90.742	Anabas_testudineus
ENSGACG00000016702	sall1a	99	68.496	ENSAPLG00000003356	SALL1	99	68.698	Anas_platyrhynchos
ENSGACG00000016702	sall1a	99	66.742	ENSACAG00000014399	SALL1	96	66.616	Anolis_carolinensis
ENSGACG00000016702	sall1a	100	67.065	ENSANAG00000027238	SALL1	100	67.612	Aotus_nancymaae
ENSGACG00000016702	sall1a	99	90.123	ENSACLG00000017148	sall1a	99	90.123	Astatotilapia_calliptera
ENSGACG00000016702	sall1a	99	51.973	ENSAMXG00000017702	sall1b	99	52.339	Astyanax_mexicanus
ENSGACG00000016702	sall1a	99	79.665	ENSAMXG00000018599	sall1a	99	79.665	Astyanax_mexicanus
ENSGACG00000016702	sall1a	100	66.443	ENSBTAG00000008544	SALL1	100	66.816	Bos_taurus
ENSGACG00000016702	sall1a	100	67.214	ENSCJAG00000001740	SALL1	100	67.761	Callithrix_jacchus
ENSGACG00000016702	sall1a	100	66.218	ENSCAFG00000009755	SALL1	100	66.990	Canis_familiaris
ENSGACG00000016702	sall1a	100	66.218	ENSCAFG00020002842	SALL1	100	66.990	Canis_lupus_dingo
ENSGACG00000016702	sall1a	100	66.567	ENSCHIG00000026074	SALL1	100	66.916	Capra_hircus
ENSGACG00000016702	sall1a	100	67.564	ENSTSYG00000029464	SALL1	100	67.614	Carlito_syrichta
ENSGACG00000016702	sall1a	98	67.048	ENSCPOG00000006564	SALL1	100	67.124	Cavia_porcellus
ENSGACG00000016702	sall1a	100	65.522	ENSCCAG00000001639	SALL1	100	65.996	Cebus_capucinus
ENSGACG00000016702	sall1a	100	66.990	ENSCATG00000004982	SALL1	100	67.761	Cercocebus_atys
ENSGACG00000016702	sall1a	100	66.741	ENSCLAG00000006380	SALL1	100	66.518	Chinchilla_lanigera
ENSGACG00000016702	sall1a	100	66.393	ENSCSAG00000005319	SALL1	100	66.840	Chlorocebus_sabaeus
ENSGACG00000016702	sall1a	66	65.234	ENSCHOG00000000800	-	69	65.490	Choloepus_hoffmanni
ENSGACG00000016702	sall1a	99	68.219	ENSCPBG00000015924	SALL1	99	68.820	Chrysemys_picta_bellii
ENSGACG00000016702	sall1a	100	67.065	ENSCANG00000036664	SALL1	100	67.987	Colobus_angolensis_palliatus
ENSGACG00000016702	sall1a	100	65.969	ENSCGRG00001023314	-	100	66.243	Cricetulus_griseus_chok1gshd
ENSGACG00000016702	sall1a	98	65.904	ENSCGRG00000009496	Sall1	100	66.183	Cricetulus_griseus_crigri
ENSGACG00000016702	sall1a	100	88.558	ENSCSEG00000009349	sall1a	100	88.558	Cynoglossus_semilaevis
ENSGACG00000016702	sall1a	90	87.446	ENSCVAG00000020513	sall1a	99	87.446	Cyprinodon_variegatus
ENSGACG00000016702	sall1a	99	79.011	ENSDARG00000074319	sall1a	99	78.327	Danio_rerio
ENSGACG00000016702	sall1a	99	47.731	ENSDARG00000075891	sall1b	99	47.226	Danio_rerio
ENSGACG00000016702	sall1a	100	67.588	ENSDNOG00000016413	SALL1	100	67.464	Dasypus_novemcinctus
ENSGACG00000016702	sall1a	98	66.819	ENSETEG00000015150	SALL1	100	66.565	Echinops_telfairi
ENSGACG00000016702	sall1a	62	43.142	ENSEBUG00000008798	SALL1	67	41.871	Eptatretus_burgeri
ENSGACG00000016702	sall1a	100	67.041	ENSEASG00005014602	SALL1	100	67.391	Equus_asinus_asinus
ENSGACG00000016702	sall1a	91	64.988	ENSECAG00000011334	SALL1	99	65.207	Equus_caballus
ENSGACG00000016702	sall1a	98	66.641	ENSEEUG00000002014	SALL1	100	66.718	Erinaceus_europaeus
ENSGACG00000016702	sall1a	99	54.361	ENSELUG00000017774	-	99	54.436	Esox_lucius
ENSGACG00000016702	sall1a	99	76.652	ENSELUG00000006159	sall1a	99	76.796	Esox_lucius
ENSGACG00000016702	sall1a	100	65.870	ENSFCAG00000024654	SALL1	100	66.425	Felis_catus
ENSGACG00000016702	sall1a	99	68.722	ENSFALG00000000074	SALL1	99	68.599	Ficedula_albicollis
ENSGACG00000016702	sall1a	74	63.265	ENSFHEG00000008424	-	99	63.265	Fundulus_heteroclitus
ENSGACG00000016702	sall1a	99	88.897	ENSFHEG00000012579	sall1a	99	88.897	Fundulus_heteroclitus
ENSGACG00000016702	sall1a	97	40.517	ENSGMOG00000013383	-	98	40.862	Gadus_morhua
ENSGACG00000016702	sall1a	99	83.206	ENSGMOG00000006103	sall1a	99	83.206	Gadus_morhua
ENSGACG00000016702	sall1a	99	68.947	ENSGALG00000039238	SALL1	99	68.825	Gallus_gallus
ENSGACG00000016702	sall1a	99	89.373	ENSGAFG00000009964	sall1a	99	89.373	Gambusia_affinis
ENSGACG00000016702	sall1a	99	67.814	ENSGAGG00000013979	SALL1	99	68.413	Gopherus_agassizii
ENSGACG00000016702	sall1a	100	66.717	ENSGGOG00000000663	SALL1	100	67.189	Gorilla_gorilla
ENSGACG00000016702	sall1a	99	90.046	ENSHBUG00000022005	sall1a	99	90.046	Haplochromis_burtoni
ENSGACG00000016702	sall1a	100	66.816	ENSHGLG00000004288	-	100	67.114	Heterocephalus_glaber_female
ENSGACG00000016702	sall1a	100	66.816	ENSHGLG00100017496	SALL1	100	67.114	Heterocephalus_glaber_male
ENSGACG00000016702	sall1a	99	83.573	ENSHCOG00000000974	sall1a	99	83.573	Hippocampus_comes
ENSGACG00000016702	sall1a	99	50.189	ENSIPUG00000022928	sall1b	99	50.151	Ictalurus_punctatus
ENSGACG00000016702	sall1a	99	78.675	ENSIPUG00000016265	SALL1	99	77.896	Ictalurus_punctatus
ENSGACG00000016702	sall1a	100	67.236	ENSSTOG00000020885	SALL1	100	67.584	Ictidomys_tridecemlineatus
ENSGACG00000016702	sall1a	99	89.510	ENSKMAG00000016681	sall1a	99	89.510	Kryptolebias_marmoratus
ENSGACG00000016702	sall1a	98	88.419	ENSLBEG00000012207	sall1a	96	88.419	Labrus_bergylta
ENSGACG00000016702	sall1a	99	67.620	ENSLACG00000003556	SALL1	99	67.997	Latimeria_chalumnae
ENSGACG00000016702	sall1a	92	39.323	ENSLACG00000014018	-	93	39.382	Latimeria_chalumnae
ENSGACG00000016702	sall1a	99	76.324	ENSLOCG00000007283	sall1b	99	76.021	Lepisosteus_oculatus
ENSGACG00000016702	sall1a	98	66.998	ENSLAFG00000015251	SALL1	100	67.227	Loxodonta_africana
ENSGACG00000016702	sall1a	100	67.263	ENSMFAG00000003298	SALL1	100	67.785	Macaca_fascicularis
ENSGACG00000016702	sall1a	93	67.203	ENSMMUG00000017200	SALL1	100	67.765	Macaca_mulatta
ENSGACG00000016702	sall1a	93	67.390	ENSMNEG00000034770	SALL1	100	67.605	Macaca_nemestrina
ENSGACG00000016702	sall1a	100	67.140	ENSMLEG00000036406	SALL1	100	67.862	Mandrillus_leucophaeus
ENSGACG00000016702	sall1a	100	91.361	ENSMAMG00000004164	sall1a	100	90.902	Mastacembelus_armatus
ENSGACG00000016702	sall1a	99	90.199	ENSMZEG00005006479	sall1a	99	90.199	Maylandia_zebra
ENSGACG00000016702	sall1a	98	68.659	ENSMGAG00000004704	SALL1	99	68.534	Meleagris_gallopavo
ENSGACG00000016702	sall1a	100	65.590	ENSMAUG00000019093	Sall1	100	66.066	Mesocricetus_auratus
ENSGACG00000016702	sall1a	100	67.165	ENSMICG00000036486	SALL1	100	67.091	Microcebus_murinus
ENSGACG00000016702	sall1a	100	89.671	ENSMMOG00000016400	sall1a	100	89.671	Mola_mola
ENSGACG00000016702	sall1a	100	67.889	ENSMODG00000013114	SALL1	100	67.868	Monodelphis_domestica
ENSGACG00000016702	sall1a	100	90.436	ENSMALG00000013400	sall1a	100	90.436	Monopterus_albus
ENSGACG00000016702	sall1a	100	66.024	MGP_CAROLIEiJ_G0031362	Sall1	100	66.098	Mus_caroli
ENSGACG00000016702	sall1a	100	65.530	ENSMUSG00000031665	Sall1	100	65.850	Mus_musculus
ENSGACG00000016702	sall1a	100	65.803	MGP_PahariEiJ_G0022961	Sall1	100	65.356	Mus_pahari
ENSGACG00000016702	sall1a	100	65.604	MGP_SPRETEiJ_G0032480	Sall1	100	65.850	Mus_spretus
ENSGACG00000016702	sall1a	99	65.680	ENSMPUG00000003265	SALL1	96	66.033	Mustela_putorius_furo
ENSGACG00000016702	sall1a	97	65.184	ENSMLUG00000015541	SALL1	99	66.031	Myotis_lucifugus
ENSGACG00000016702	sall1a	99	90.352	ENSNBRG00000009307	sall1a	99	90.352	Neolamprologus_brichardi
ENSGACG00000016702	sall1a	93	80.556	ENSNLEG00000001008	SALL1	99	80.556	Nomascus_leucogenys
ENSGACG00000016702	sall1a	100	67.892	ENSMEUG00000012206	SALL1	100	67.844	Notamacropus_eugenii
ENSGACG00000016702	sall1a	86	71.554	ENSOPRG00000005645	SALL1	71	71.429	Ochotona_princeps
ENSGACG00000016702	sall1a	100	66.867	ENSODEG00000003685	SALL1	100	66.717	Octodon_degus
ENSGACG00000016702	sall1a	99	90.046	ENSONIG00000002831	sall1a	99	90.046	Oreochromis_niloticus
ENSGACG00000016702	sall1a	96	64.263	ENSOANG00000013399	SALL1	97	76.132	Ornithorhynchus_anatinus
ENSGACG00000016702	sall1a	99	88.515	ENSORLG00000013827	sall1a	99	89.180	Oryzias_latipes
ENSGACG00000016702	sall1a	99	88.591	ENSORLG00020020570	sall1a	99	88.591	Oryzias_latipes_hni
ENSGACG00000016702	sall1a	99	88.515	ENSORLG00015018830	sall1a	99	89.265	Oryzias_latipes_hsok
ENSGACG00000016702	sall1a	99	88.515	ENSOMEG00000016043	sall1a	99	88.678	Oryzias_melastigma
ENSGACG00000016702	sall1a	100	67.461	ENSOGAG00000027316	SALL1	100	67.438	Otolemur_garnettii
ENSGACG00000016702	sall1a	100	62.342	ENSOARG00000017583	SALL1	100	63.249	Ovis_aries
ENSGACG00000016702	sall1a	98	67.072	ENSPPAG00000035657	SALL1	100	67.352	Pan_paniscus
ENSGACG00000016702	sall1a	100	49.096	ENSPPAG00000035136	-	100	49.472	Pan_paniscus
ENSGACG00000016702	sall1a	100	65.795	ENSPPRG00000023283	SALL1	100	66.344	Panthera_pardus
ENSGACG00000016702	sall1a	80	69.794	ENSPTIG00000013539	-	94	69.811	Panthera_tigris_altaica
ENSGACG00000016702	sall1a	100	67.014	ENSPTRG00000008108	SALL1	100	67.435	Pan_troglodytes
ENSGACG00000016702	sall1a	99	49.160	ENSPTRG00000045256	-	99	49.770	Pan_troglodytes
ENSGACG00000016702	sall1a	100	67.065	ENSPANG00000024176	SALL1	100	67.788	Papio_anubis
ENSGACG00000016702	sall1a	99	69.757	ENSPKIG00000005383	-	99	69.985	Paramormyrops_kingsleyae
ENSGACG00000016702	sall1a	99	70.887	ENSPKIG00000022251	sall1a	99	70.919	Paramormyrops_kingsleyae
ENSGACG00000016702	sall1a	99	68.947	ENSPSIG00000008582	SALL1	99	68.976	Pelodiscus_sinensis
ENSGACG00000016702	sall1a	100	83.396	ENSPMGG00000021788	sall1a	100	83.396	Periophthalmus_magnuspinnatus
ENSGACG00000016702	sall1a	100	67.940	ENSPCIG00000017840	SALL1	100	67.844	Phascolarctos_cinereus
ENSGACG00000016702	sall1a	98	89.114	ENSPFOG00000015799	sall1a	96	89.114	Poecilia_formosa
ENSGACG00000016702	sall1a	99	89.373	ENSPLAG00000022539	sall1a	99	89.373	Poecilia_latipinna
ENSGACG00000016702	sall1a	99	89.602	ENSPMEG00000020894	sall1a	99	89.602	Poecilia_mexicana
ENSGACG00000016702	sall1a	99	88.991	ENSPREG00000006802	sall1a	99	88.991	Poecilia_reticulata
ENSGACG00000016702	sall1a	90	65.858	ENSPPYG00000007345	SALL1	96	66.445	Pongo_abelii
ENSGACG00000016702	sall1a	85	67.981	ENSPCAG00000008162	SALL1	93	68.046	Procavia_capensis
ENSGACG00000016702	sall1a	100	66.741	ENSPCOG00000028192	SALL1	100	67.040	Propithecus_coquereli
ENSGACG00000016702	sall1a	67	68.822	ENSPVAG00000015374	SALL1	100	68.902	Pteropus_vampyrus
ENSGACG00000016702	sall1a	99	90.199	ENSPNYG00000010865	sall1a	99	90.199	Pundamilia_nyererei
ENSGACG00000016702	sall1a	99	77.626	ENSPNAG00000023644	sall1a	99	77.930	Pygocentrus_nattereri
ENSGACG00000016702	sall1a	99	65.306	ENSPNAG00000028248	-	71	65.306	Pygocentrus_nattereri
ENSGACG00000016702	sall1a	99	52.972	ENSPNAG00000007442	sall1b	99	53.313	Pygocentrus_nattereri
ENSGACG00000016702	sall1a	100	66.342	ENSRNOG00000013907	Sall1	100	66.118	Rattus_norvegicus
ENSGACG00000016702	sall1a	93	66.989	ENSRBIG00000015707	SALL1	100	67.903	Rhinopithecus_bieti
ENSGACG00000016702	sall1a	97	67.255	ENSRROG00000035777	SALL1	100	67.685	Rhinopithecus_roxellana
ENSGACG00000016702	sall1a	100	67.239	ENSSBOG00000032186	SALL1	100	67.761	Saimiri_boliviensis_boliviensis
ENSGACG00000016702	sall1a	100	67.592	ENSSHAG00000009477	SALL1	100	67.393	Sarcophilus_harrisii
ENSGACG00000016702	sall1a	98	70.756	ENSSFOG00015001590	sall1a	99	70.756	Scleropages_formosus
ENSGACG00000016702	sall1a	99	71.979	ENSSFOG00015020020	sall1a	99	71.677	Scleropages_formosus
ENSGACG00000016702	sall1a	100	91.354	ENSSMAG00000009160	sall1a	100	91.354	Scophthalmus_maximus
ENSGACG00000016702	sall1a	100	92.349	ENSSDUG00000006507	sall1a	100	92.349	Seriola_dumerili
ENSGACG00000016702	sall1a	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSGACG00000016702	sall1a	100	92.349	ENSSLDG00000017721	sall1a	100	92.349	Seriola_lalandi_dorsalis
ENSGACG00000016702	sall1a	97	66.260	ENSSARG00000000661	SALL1	99	66.463	Sorex_araneus
ENSGACG00000016702	sall1a	99	67.519	ENSSPUG00000000156	SALL1	99	67.645	Sphenodon_punctatus
ENSGACG00000016702	sall1a	99	91.278	ENSSPAG00000021615	sall1a	99	91.278	Stegastes_partitus
ENSGACG00000016702	sall1a	100	65.870	ENSSSCG00000002836	SALL1	100	66.368	Sus_scrofa
ENSGACG00000016702	sall1a	99	68.571	ENSTGUG00000007514	SALL1	99	68.298	Taeniopygia_guttata
ENSGACG00000016702	sall1a	91	86.276	ENSTRUG00000008950	sall1a	100	86.276	Takifugu_rubripes
ENSGACG00000016702	sall1a	92	83.930	ENSTNIG00000004257	sall1a	100	84.430	Tetraodon_nigroviridis
ENSGACG00000016702	sall1a	61	77.397	ENSTBEG00000002119	-	53	77.397	Tupaia_belangeri
ENSGACG00000016702	sall1a	90	65.436	ENSUAMG00000023379	-	92	65.719	Ursus_americanus
ENSGACG00000016702	sall1a	90	65.217	ENSVVUG00000019383	-	99	65.690	Vulpes_vulpes
ENSGACG00000016702	sall1a	99	65.179	ENSXETG00000018417	sall1	99	65.201	Xenopus_tropicalis
ENSGACG00000016702	sall1a	97	35.479	ENSXETG00000017176	sall2	94	39.116	Xenopus_tropicalis
ENSGACG00000016702	sall1a	99	89.220	ENSXMAG00000016273	sall1a	99	89.220	Xiphophorus_maculatus