EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000016726 (Gene tree)
Gene ID: -
Gene Symbol: ern2
Alias: si:ch211-14k19.11
Full Name: endoplasmic reticulum to nucleus signaling 2
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 10226 bases
Position: chrgroupIX:5114465-5124690
Accession: ZDB-GENE-090312-15
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022089	Ribonuc_2-5A	PF06479.12	1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022131	-	2967	-	ENSGACP00000022089	989 (aa)	-	G3PWV0
ENSGACT00000022132	-	786	-	ENSGACP00000022090	262 (aa)	-	G3PWV1

Gene Model

Click here to download ENSGACG00000016726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000016726	ern2	93	54.262	ENSGACG00000011700	ern1	97	53.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016726	ern2	95	85.789	ENSAPOG00000002325	ern2	99	84.995	Acanthochromis_polyacanthus
ENSGACG00000016726	ern2	94	81.423	ENSACIG00000015500	ern2	99	81.061	Amphilophus_citrinellus
ENSGACG00000016726	ern2	95	85.774	ENSAOCG00000001933	ern2	98	85.300	Amphiprion_ocellaris
ENSGACG00000016726	ern2	95	85.983	ENSAPEG00000000821	ern2	98	85.507	Amphiprion_percula
ENSGACG00000016726	ern2	96	84.995	ENSATEG00000008597	ern2	98	84.995	Anabas_testudineus
ENSGACG00000016726	ern2	95	83.844	ENSACLG00000000966	ern2	98	82.970	Astatotilapia_calliptera
ENSGACG00000016726	ern2	94	67.914	ENSAMXG00000018368	ern2	99	67.089	Astyanax_mexicanus
ENSGACG00000016726	ern2	94	80.403	ENSCSEG00000020936	ern2	96	80.400	Cynoglossus_semilaevis
ENSGACG00000016726	ern2	94	81.058	ENSCVAG00000015538	ern2	98	80.312	Cyprinodon_variegatus
ENSGACG00000016726	ern2	96	67.294	ENSDARG00000058475	ern2	95	77.250	Danio_rerio
ENSGACG00000016726	ern2	86	72.861	ENSELUG00000009350	ern2	92	72.861	Esox_lucius
ENSGACG00000016726	ern2	94	81.847	ENSFHEG00000002578	ern2	98	80.982	Fundulus_heteroclitus
ENSGACG00000016726	ern2	85	82.620	ENSGMOG00000006029	ern2	90	82.620	Gadus_morhua
ENSGACG00000016726	ern2	95	83.738	ENSHBUG00000019242	ern2	99	82.949	Haplochromis_burtoni
ENSGACG00000016726	ern2	84	76.940	ENSHCOG00000020503	ern2	91	75.979	Hippocampus_comes
ENSGACG00000016726	ern2	89	65.011	ENSIPUG00000001249	ern2	95	66.104	Ictalurus_punctatus
ENSGACG00000016726	ern2	95	81.316	ENSKMAG00000007537	ern2	98	80.585	Kryptolebias_marmoratus
ENSGACG00000016726	ern2	95	85.518	ENSLBEG00000005440	ern2	98	85.000	Labrus_bergylta
ENSGACG00000016726	ern2	95	59.939	ENSLACG00000011540	ern2	98	60.663	Latimeria_chalumnae
ENSGACG00000016726	ern2	95	82.899	ENSMAMG00000008619	ern2	99	82.051	Mastacembelus_armatus
ENSGACG00000016726	ern2	95	83.844	ENSMZEG00005011884	ern2	98	82.970	Maylandia_zebra
ENSGACG00000016726	ern2	95	80.042	ENSMMOG00000003643	ern2	98	79.749	Mola_mola
ENSGACG00000016726	ern2	95	82.046	ENSMALG00000002568	ern2	98	81.762	Monopterus_albus
ENSGACG00000016726	ern2	94	82.147	ENSONIG00000003276	ern2	98	81.934	Oreochromis_niloticus
ENSGACG00000016726	ern2	94	80.426	ENSORLG00000008924	ERN2	99	79.585	Oryzias_latipes
ENSGACG00000016726	ern2	94	80.426	ENSORLG00020012672	ern2	97	80.426	Oryzias_latipes_hni
ENSGACG00000016726	ern2	94	80.319	ENSORLG00015011995	ern2	97	80.319	Oryzias_latipes_hsok
ENSGACG00000016726	ern2	94	80.745	ENSOMEG00000022267	ern2	99	79.503	Oryzias_melastigma
ENSGACG00000016726	ern2	96	69.561	ENSPKIG00000013181	ern2	98	69.183	Paramormyrops_kingsleyae
ENSGACG00000016726	ern2	78	80.893	ENSPMGG00000016482	ern2	84	80.893	Periophthalmus_magnuspinnatus
ENSGACG00000016726	ern2	87	78.316	ENSPFOG00000006600	-	99	78.547	Poecilia_formosa
ENSGACG00000016726	ern2	65	73.820	ENSPLAG00000018226	-	96	85.101	Poecilia_latipinna
ENSGACG00000016726	ern2	64	74.689	ENSPMEG00000004696	-	99	75.194	Poecilia_mexicana
ENSGACG00000016726	ern2	95	83.738	ENSPNYG00000014961	ern2	98	82.866	Pundamilia_nyererei
ENSGACG00000016726	ern2	94	67.962	ENSPNAG00000014531	ern2	99	67.681	Pygocentrus_nattereri
ENSGACG00000016726	ern2	87	84.677	ENSSMAG00000021268	ern2	99	84.677	Scophthalmus_maximus
ENSGACG00000016726	ern2	95	87.474	ENSSDUG00000016726	ern2	98	86.646	Seriola_dumerili
ENSGACG00000016726	ern2	95	87.117	ENSSLDG00000022830	ern2	98	86.625	Seriola_lalandi_dorsalis
ENSGACG00000016726	ern2	80	77.171	ENSSPAG00000013487	ern2	93	77.171	Stegastes_partitus
ENSGACG00000016726	ern2	96	79.731	ENSTRUG00000011288	ern2	98	79.731	Takifugu_rubripes
ENSGACG00000016726	ern2	95	54.715	ENSXETG00000010337	ern2	98	55.288	Xenopus_tropicalis
ENSGACG00000016726	ern2	69	83.586	ENSXCOG00000009393	ern2	91	83.586	Xiphophorus_couchianus
ENSGACG00000016726	ern2	95	78.964	ENSXMAG00000006362	-	98	78.378	Xiphophorus_maculatus