EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000016749 (Gene tree)
Gene ID: -
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 6905 bases
Position: chrgroupIV:3811447-3818351
Accession: ZDB-GENE-030131-5546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022109	SRP72	PF08492.12	2.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022151	-	2016	-	ENSGACP00000022109	672 (aa)	-	G3PWX0

Gene Model

Click here to download ENSGACG00000016749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016749's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016749	srp72	97	75.762	ENSG00000174780	SRP72	99	75.149	Homo_sapiens
ENSGACG00000016749	srp72	99	77.477	ENSAPOG00000019438	srp72	99	77.477	Acanthochromis_polyacanthus
ENSGACG00000016749	srp72	96	76.279	ENSAMEG00000008469	SRP72	100	75.519	Ailuropoda_melanoleuca
ENSGACG00000016749	srp72	99	89.866	ENSACIG00000000488	srp72	100	89.866	Amphilophus_citrinellus
ENSGACG00000016749	srp72	99	89.985	ENSAOCG00000011256	srp72	100	89.985	Amphiprion_ocellaris
ENSGACG00000016749	srp72	99	91.480	ENSAPEG00000001512	srp72	100	89.836	Amphiprion_percula
ENSGACG00000016749	srp72	92	91.558	ENSATEG00000006781	srp72	99	91.558	Anabas_testudineus
ENSGACG00000016749	srp72	98	75.680	ENSAPLG00000008751	SRP72	98	74.924	Anas_platyrhynchos
ENSGACG00000016749	srp72	96	75.000	ENSACAG00000002381	SRP72	99	74.443	Anolis_carolinensis
ENSGACG00000016749	srp72	95	75.824	ENSANAG00000020836	-	93	76.077	Aotus_nancymaae
ENSGACG00000016749	srp72	99	90.583	ENSACLG00000014617	srp72	100	90.583	Astatotilapia_calliptera
ENSGACG00000016749	srp72	97	81.069	ENSAMXG00000004011	srp72	100	80.597	Astyanax_mexicanus
ENSGACG00000016749	srp72	97	75.152	ENSBTAG00000010593	SRP72	99	74.554	Bos_taurus
ENSGACG00000016749	srp72	97	75.000	ENSCJAG00000017998	SRP72	99	74.405	Callithrix_jacchus
ENSGACG00000016749	srp72	97	76.067	ENSCAFG00000002244	SRP72	99	75.446	Canis_familiaris
ENSGACG00000016749	srp72	97	76.067	ENSCAFG00020027338	SRP72	98	76.239	Canis_lupus_dingo
ENSGACG00000016749	srp72	97	73.668	ENSCHIG00000021465	SRP72	99	73.105	Capra_hircus
ENSGACG00000016749	srp72	96	76.425	ENSTSYG00000010571	-	99	75.186	Carlito_syrichta
ENSGACG00000016749	srp72	80	59.740	ENSCAPG00000016668	SRP72	100	67.181	Cavia_aperea
ENSGACG00000016749	srp72	97	75.762	ENSCPOG00000000218	SRP72	99	75.000	Cavia_porcellus
ENSGACG00000016749	srp72	97	73.620	ENSCCAG00000030830	-	99	73.054	Cebus_capucinus
ENSGACG00000016749	srp72	95	75.943	ENSCCAG00000030683	-	93	76.198	Cebus_capucinus
ENSGACG00000016749	srp72	97	75.610	ENSCATG00000008072	SRP72	99	75.000	Cercocebus_atys
ENSGACG00000016749	srp72	97	59.877	ENSCATG00000045359	-	95	59.724	Cercocebus_atys
ENSGACG00000016749	srp72	97	75.457	ENSCLAG00000003571	SRP72	99	74.851	Chinchilla_lanigera
ENSGACG00000016749	srp72	97	71.037	ENSCSAG00000005079	SRP72	99	70.536	Chlorocebus_sabaeus
ENSGACG00000016749	srp72	90	74.359	ENSCHOG00000013240	SRP72	90	74.359	Choloepus_hoffmanni
ENSGACG00000016749	srp72	96	76.398	ENSCPBG00000015015	SRP72	99	75.934	Chrysemys_picta_bellii
ENSGACG00000016749	srp72	93	40.951	ENSCING00000002417	-	93	41.460	Ciona_intestinalis
ENSGACG00000016749	srp72	93	41.176	ENSCSAVG00000011288	-	92	41.667	Ciona_savignyi
ENSGACG00000016749	srp72	97	75.610	ENSCANG00000041709	SRP72	99	75.000	Colobus_angolensis_palliatus
ENSGACG00000016749	srp72	99	47.768	ENSCANG00000037920	-	98	51.446	Colobus_angolensis_palliatus
ENSGACG00000016749	srp72	99	75.595	ENSCGRG00001013548	Srp72	99	74.851	Cricetulus_griseus_chok1gshd
ENSGACG00000016749	srp72	95	75.862	ENSCGRG00000003013	Srp72	99	75.078	Cricetulus_griseus_crigri
ENSGACG00000016749	srp72	97	88.479	ENSCSEG00000003616	srp72	100	88.490	Cynoglossus_semilaevis
ENSGACG00000016749	srp72	91	89.672	ENSCVAG00000001520	srp72	100	89.672	Cyprinodon_variegatus
ENSGACG00000016749	srp72	85	82.137	ENSDARG00000014139	srp72	99	82.017	Danio_rerio
ENSGACG00000016749	srp72	98	71.601	ENSDNOG00000039012	SRP72	83	71.386	Dasypus_novemcinctus
ENSGACG00000016749	srp72	96	76.043	ENSDORG00000000171	Srp72	99	75.336	Dipodomys_ordii
ENSGACG00000016749	srp72	95	41.077	FBgn0038810	Srp72	94	41.506	Drosophila_melanogaster
ENSGACG00000016749	srp72	96	75.659	ENSETEG00000005191	SRP72	99	75.187	Echinops_telfairi
ENSGACG00000016749	srp72	75	63.281	ENSEBUG00000003696	srp72	98	63.281	Eptatretus_burgeri
ENSGACG00000016749	srp72	97	75.762	ENSEASG00005017747	SRP72	99	75.149	Equus_asinus_asinus
ENSGACG00000016749	srp72	97	75.610	ENSECAG00000006920	SRP72	99	75.000	Equus_caballus
ENSGACG00000016749	srp72	99	83.086	ENSELUG00000022415	srp72	100	82.344	Esox_lucius
ENSGACG00000016749	srp72	96	76.117	ENSFCAG00000027600	SRP72	99	76.675	Felis_catus
ENSGACG00000016749	srp72	96	76.744	ENSFALG00000006713	SRP72	100	75.852	Ficedula_albicollis
ENSGACG00000016749	srp72	97	75.305	ENSFDAG00000002014	-	99	74.702	Fukomys_damarensis
ENSGACG00000016749	srp72	96	48.916	ENSFDAG00000009793	-	94	47.458	Fukomys_damarensis
ENSGACG00000016749	srp72	100	87.519	ENSFHEG00000017652	srp72	93	87.519	Fundulus_heteroclitus
ENSGACG00000016749	srp72	98	81.032	ENSGMOG00000005986	srp72	100	80.861	Gadus_morhua
ENSGACG00000016749	srp72	96	77.174	ENSGALG00000011403	SRP72	99	75.483	Gallus_gallus
ENSGACG00000016749	srp72	99	88.209	ENSGAFG00000017762	srp72	100	87.313	Gambusia_affinis
ENSGACG00000016749	srp72	87	75.980	ENSGAGG00000024611	SRP72	98	76.936	Gopherus_agassizii
ENSGACG00000016749	srp72	97	75.305	ENSGGOG00000013234	-	99	74.702	Gorilla_gorilla
ENSGACG00000016749	srp72	99	90.732	ENSHBUG00000020723	srp72	100	90.732	Haplochromis_burtoni
ENSGACG00000016749	srp72	52	60.345	ENSHGLG00000003496	-	99	58.166	Heterocephalus_glaber_female
ENSGACG00000016749	srp72	97	75.457	ENSHGLG00000009791	SRP72	99	74.851	Heterocephalus_glaber_female
ENSGACG00000016749	srp72	97	58.931	ENSHGLG00000018597	-	99	58.929	Heterocephalus_glaber_female
ENSGACG00000016749	srp72	97	70.291	ENSHGLG00000005029	-	99	69.357	Heterocephalus_glaber_female
ENSGACG00000016749	srp72	86	66.667	ENSHGLG00000003950	-	99	66.667	Heterocephalus_glaber_female
ENSGACG00000016749	srp72	89	69.554	ENSHGLG00000010633	-	99	68.947	Heterocephalus_glaber_female
ENSGACG00000016749	srp72	97	70.291	ENSHGLG00100011236	-	99	69.357	Heterocephalus_glaber_male
ENSGACG00000016749	srp72	97	75.457	ENSHGLG00100009021	SRP72	99	74.851	Heterocephalus_glaber_male
ENSGACG00000016749	srp72	86	66.228	ENSHGLG00100017133	-	99	66.228	Heterocephalus_glaber_male
ENSGACG00000016749	srp72	97	56.355	ENSHGLG00100009346	-	99	56.866	Heterocephalus_glaber_male
ENSGACG00000016749	srp72	97	87.156	ENSHCOG00000013760	srp72	100	86.248	Hippocampus_comes
ENSGACG00000016749	srp72	99	81.940	ENSIPUG00000000210	srp72	100	81.343	Ictalurus_punctatus
ENSGACG00000016749	srp72	97	75.915	ENSSTOG00000007305	SRP72	99	75.298	Ictidomys_tridecemlineatus
ENSGACG00000016749	srp72	96	75.466	ENSJJAG00000018324	Srp72	99	74.443	Jaculus_jaculus
ENSGACG00000016749	srp72	99	87.910	ENSKMAG00000003776	srp72	100	86.567	Kryptolebias_marmoratus
ENSGACG00000016749	srp72	98	81.583	ENSLOCG00000002628	srp72	98	81.118	Lepisosteus_oculatus
ENSGACG00000016749	srp72	97	75.610	ENSLAFG00000018307	SRP72	99	75.000	Loxodonta_africana
ENSGACG00000016749	srp72	97	75.610	ENSMFAG00000031065	SRP72	99	75.000	Macaca_fascicularis
ENSGACG00000016749	srp72	97	60.796	ENSMFAG00000037164	-	97	60.896	Macaca_fascicularis
ENSGACG00000016749	srp72	98	75.569	ENSMMUG00000016368	SRP72	98	74.810	Macaca_mulatta
ENSGACG00000016749	srp72	94	56.349	ENSMMUG00000021262	-	95	56.121	Macaca_mulatta
ENSGACG00000016749	srp72	97	75.610	ENSMNEG00000038065	-	99	75.000	Macaca_nemestrina
ENSGACG00000016749	srp72	95	74.882	ENSMLEG00000030140	-	93	74.641	Mandrillus_leucophaeus
ENSGACG00000016749	srp72	100	91.518	ENSMAMG00000014989	srp72	89	91.518	Mastacembelus_armatus
ENSGACG00000016749	srp72	99	90.732	ENSMZEG00005003325	srp72	100	90.732	Maylandia_zebra
ENSGACG00000016749	srp72	92	72.786	ENSMGAG00000008567	SRP72	100	75.319	Meleagris_gallopavo
ENSGACG00000016749	srp72	98	75.643	ENSMAUG00000001237	Srp72	99	74.738	Mesocricetus_auratus
ENSGACG00000016749	srp72	95	75.667	ENSMICG00000008507	-	93	75.917	Microcebus_murinus
ENSGACG00000016749	srp72	99	75.298	ENSMOCG00000020309	Srp72	99	74.554	Microtus_ochrogaster
ENSGACG00000016749	srp72	99	89.836	ENSMMOG00000002627	srp72	100	89.836	Mola_mola
ENSGACG00000016749	srp72	96	73.447	ENSMODG00000020697	SRP72	99	72.321	Monodelphis_domestica
ENSGACG00000016749	srp72	99	91.181	ENSMALG00000003747	srp72	100	91.405	Monopterus_albus
ENSGACG00000016749	srp72	99	75.298	MGP_CAROLIEiJ_G0027323	Srp72	99	74.554	Mus_caroli
ENSGACG00000016749	srp72	99	75.298	ENSMUSG00000036323	Srp72	99	74.554	Mus_musculus
ENSGACG00000016749	srp72	99	75.940	MGP_PahariEiJ_G0017103	Srp72	99	74.740	Mus_pahari
ENSGACG00000016749	srp72	99	75.298	MGP_SPRETEiJ_G0028317	Srp72	99	74.554	Mus_spretus
ENSGACG00000016749	srp72	96	76.279	ENSMPUG00000004828	SRP72	99	75.298	Mustela_putorius_furo
ENSGACG00000016749	srp72	96	75.542	ENSMLUG00000007344	SRP72	99	74.776	Myotis_lucifugus
ENSGACG00000016749	srp72	99	75.780	ENSNGAG00000012595	Srp72	100	77.387	Nannospalax_galili
ENSGACG00000016749	srp72	99	86.996	ENSNBRG00000014492	srp72	100	86.547	Neolamprologus_brichardi
ENSGACG00000016749	srp72	97	70.534	ENSNLEG00000008806	-	99	69.940	Nomascus_leucogenys
ENSGACG00000016749	srp72	86	76.042	ENSMEUG00000005164	SRP72	90	73.727	Notamacropus_eugenii
ENSGACG00000016749	srp72	96	74.224	ENSOPRG00000012521	SRP72	99	73.363	Ochotona_princeps
ENSGACG00000016749	srp72	96	73.798	ENSODEG00000012214	SRP72	99	72.917	Octodon_degus
ENSGACG00000016749	srp72	100	90.625	ENSONIG00000001446	srp72	99	90.625	Oreochromis_niloticus
ENSGACG00000016749	srp72	97	61.401	ENSOANG00000008562	SRP72	99	60.857	Ornithorhynchus_anatinus
ENSGACG00000016749	srp72	97	75.878	ENSOCUG00000012226	SRP72	99	75.149	Oryctolagus_cuniculus
ENSGACG00000016749	srp72	99	84.155	ENSORLG00000020418	srp72	99	84.903	Oryzias_latipes
ENSGACG00000016749	srp72	98	83.841	ENSORLG00020009138	srp72	97	84.454	Oryzias_latipes_hni
ENSGACG00000016749	srp72	99	83.707	ENSORLG00015018251	srp72	99	84.454	Oryzias_latipes_hsok
ENSGACG00000016749	srp72	98	83.841	ENSOMEG00000022008	srp72	98	83.939	Oryzias_melastigma
ENSGACG00000016749	srp72	97	76.372	ENSOGAG00000003578	SRP72	99	75.893	Otolemur_garnettii
ENSGACG00000016749	srp72	97	75.000	ENSOARG00000004329	SRP72	99	74.405	Ovis_aries
ENSGACG00000016749	srp72	80	62.011	ENSPPAG00000032490	-	91	61.368	Pan_paniscus
ENSGACG00000016749	srp72	97	75.762	ENSPPAG00000042265	SRP72	99	75.149	Pan_paniscus
ENSGACG00000016749	srp72	98	53.916	ENSPPAG00000011428	-	95	53.718	Pan_paniscus
ENSGACG00000016749	srp72	96	76.124	ENSPPRG00000015991	SRP72	99	76.675	Panthera_pardus
ENSGACG00000016749	srp72	96	76.124	ENSPTIG00000018786	SRP72	99	76.675	Panthera_tigris_altaica
ENSGACG00000016749	srp72	80	61.825	ENSPTRG00000043609	-	91	61.142	Pan_troglodytes
ENSGACG00000016749	srp72	98	55.522	ENSPTRG00000048100	-	95	55.335	Pan_troglodytes
ENSGACG00000016749	srp72	97	75.762	ENSPTRG00000048466	-	99	75.149	Pan_troglodytes
ENSGACG00000016749	srp72	94	59.748	ENSPANG00000030230	-	98	59.874	Papio_anubis
ENSGACG00000016749	srp72	97	75.610	ENSPANG00000005495	SRP72	99	75.000	Papio_anubis
ENSGACG00000016749	srp72	93	76.077	ENSPSIG00000003003	SRP72	100	76.205	Pelodiscus_sinensis
ENSGACG00000016749	srp72	98	75.492	ENSPEMG00000012828	-	99	74.589	Peromyscus_maniculatus_bairdii
ENSGACG00000016749	srp72	96	76.698	ENSPCIG00000000732	SRP72	99	75.785	Phascolarctos_cinereus
ENSGACG00000016749	srp72	99	88.358	ENSPFOG00000003480	srp72	100	87.463	Poecilia_formosa
ENSGACG00000016749	srp72	99	88.358	ENSPLAG00000020122	srp72	100	87.463	Poecilia_latipinna
ENSGACG00000016749	srp72	99	88.209	ENSPMEG00000019988	srp72	100	87.313	Poecilia_mexicana
ENSGACG00000016749	srp72	99	87.910	ENSPREG00000006218	srp72	100	86.866	Poecilia_reticulata
ENSGACG00000016749	srp72	98	75.758	ENSPPYG00000014752	-	78	75.148	Pongo_abelii
ENSGACG00000016749	srp72	57	65.885	ENSPPYG00000009152	-	97	64.103	Pongo_abelii
ENSGACG00000016749	srp72	97	74.543	ENSPVAG00000005590	SRP72	99	73.958	Pteropus_vampyrus
ENSGACG00000016749	srp72	99	91.031	ENSPNYG00000001916	srp72	100	91.031	Pundamilia_nyererei
ENSGACG00000016749	srp72	99	83.881	ENSPNAG00000022424	srp72	100	83.433	Pygocentrus_nattereri
ENSGACG00000016749	srp72	99	73.810	ENSRNOG00000002100	LOC108348180	99	73.661	Rattus_norvegicus
ENSGACG00000016749	srp72	99	58.559	ENSRBIG00000029328	-	98	58.491	Rhinopithecus_bieti
ENSGACG00000016749	srp72	97	70.992	ENSRBIG00000042069	SRP72	99	70.790	Rhinopithecus_bieti
ENSGACG00000016749	srp72	97	75.610	ENSRROG00000035704	SRP72	99	75.000	Rhinopithecus_roxellana
ENSGACG00000016749	srp72	92	76.367	ENSSHAG00000000614	SRP72	99	73.065	Sarcophilus_harrisii
ENSGACG00000016749	srp72	99	81.045	ENSSFOG00015002026	srp72	100	80.746	Scleropages_formosus
ENSGACG00000016749	srp72	99	88.095	ENSSMAG00000007639	srp72	100	89.137	Scophthalmus_maximus
ENSGACG00000016749	srp72	100	93.750	ENSSDUG00000007345	srp72	98	93.750	Seriola_dumerili
ENSGACG00000016749	srp72	100	93.601	ENSSLDG00000021819	srp72	98	93.601	Seriola_lalandi_dorsalis
ENSGACG00000016749	srp72	74	75.131	ENSSARG00000005804	SRP72	76	74.623	Sorex_araneus
ENSGACG00000016749	srp72	96	76.242	ENSSPUG00000009740	SRP72	98	75.606	Sphenodon_punctatus
ENSGACG00000016749	srp72	99	91.928	ENSSPAG00000011565	srp72	100	91.928	Stegastes_partitus
ENSGACG00000016749	srp72	99	73.083	ENSSSCG00000008900	SRP72	99	72.197	Sus_scrofa
ENSGACG00000016749	srp72	96	76.625	ENSTGUG00000004767	SRP72	99	75.708	Taeniopygia_guttata
ENSGACG00000016749	srp72	97	87.462	ENSTRUG00000009831	srp72	100	87.294	Takifugu_rubripes
ENSGACG00000016749	srp72	100	88.393	ENSTNIG00000013073	srp72	99	88.393	Tetraodon_nigroviridis
ENSGACG00000016749	srp72	88	65.812	ENSTBEG00000007394	SRP72	90	65.812	Tupaia_belangeri
ENSGACG00000016749	srp72	92	75.323	ENSTTRG00000010945	SRP72	100	74.686	Tursiops_truncatus
ENSGACG00000016749	srp72	57	78.329	ENSUAMG00000001701	SRP72	99	77.193	Ursus_americanus
ENSGACG00000016749	srp72	96	76.124	ENSUMAG00000008151	SRP72	99	75.149	Ursus_maritimus
ENSGACG00000016749	srp72	97	74.390	ENSVPAG00000000458	SRP72	99	73.810	Vicugna_pacos
ENSGACG00000016749	srp72	97	75.915	ENSVVUG00000006020	SRP72	99	75.298	Vulpes_vulpes
ENSGACG00000016749	srp72	95	73.511	ENSXETG00000010205	srp72	100	73.197	Xenopus_tropicalis
ENSGACG00000016749	srp72	100	88.410	ENSXMAG00000018000	srp72	99	87.294	Xiphophorus_maculatus