EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000016772 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 6959 bases
Position: chrgroupIV:3862830-3869788
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022165	MIF4G_like	PF09088.11	9.7e-37	1	1
ENSGACP00000022165	MIF4G_like_2	PF09090.11	3.4e-87	1	1
ENSGACP00000022165	MIF4G	PF02854.19	4.8e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022207	NCBP1-201	2879	-	ENSGACP00000022165	810 (aa)	-	G3PX26

Gene Model

Click here to download ENSGACG00000016772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016772's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016772	NCBP1	98	81.807	ENSG00000136937	NCBP1	99	82.183	Homo_sapiens
ENSGACG00000016772	NCBP1	99	94.862	ENSAPOG00000008002	NCBP1	100	94.862	Acanthochromis_polyacanthus
ENSGACG00000016772	NCBP1	98	81.830	ENSAMEG00000004763	NCBP1	99	82.206	Ailuropoda_melanoleuca
ENSGACG00000016772	NCBP1	99	94.361	ENSACIG00000000274	NCBP1	100	94.361	Amphilophus_citrinellus
ENSGACG00000016772	NCBP1	99	94.987	ENSAOCG00000021148	NCBP1	100	94.987	Amphiprion_ocellaris
ENSGACG00000016772	NCBP1	99	94.987	ENSAPEG00000001701	NCBP1	100	94.987	Amphiprion_percula
ENSGACG00000016772	NCBP1	99	94.486	ENSATEG00000006929	NCBP1	100	94.486	Anabas_testudineus
ENSGACG00000016772	NCBP1	93	81.496	ENSAPLG00000016318	NCBP1	99	81.627	Anas_platyrhynchos
ENSGACG00000016772	NCBP1	99	80.946	ENSACAG00000004409	NCBP1	87	81.219	Anolis_carolinensis
ENSGACG00000016772	NCBP1	98	79.925	ENSANAG00000025744	NCBP1	99	81.981	Aotus_nancymaae
ENSGACG00000016772	NCBP1	99	93.233	ENSACLG00000014812	NCBP1	100	93.233	Astatotilapia_calliptera
ENSGACG00000016772	NCBP1	99	90.238	ENSAMXG00000016364	NCBP1	100	90.238	Astyanax_mexicanus
ENSGACG00000016772	NCBP1	98	81.932	ENSBTAG00000009732	NCBP1	99	86.446	Bos_taurus
ENSGACG00000016772	NCBP1	99	35.504	WBGene00018156	ncbp-1	100	35.504	Caenorhabditis_elegans
ENSGACG00000016772	NCBP1	98	81.681	ENSCJAG00000010840	NCBP1	99	85.748	Callithrix_jacchus
ENSGACG00000016772	NCBP1	98	82.058	ENSCAFG00000002445	NCBP1	99	82.434	Canis_familiaris
ENSGACG00000016772	NCBP1	97	82.015	ENSCAFG00020017997	NCBP1	96	88.030	Canis_lupus_dingo
ENSGACG00000016772	NCBP1	98	81.807	ENSCHIG00000020139	NCBP1	99	82.183	Capra_hircus
ENSGACG00000016772	NCBP1	50	87.531	ENSTSYG00000011914	NCBP1	99	85.404	Carlito_syrichta
ENSGACG00000016772	NCBP1	80	74.537	ENSCAPG00000014252	NCBP1	90	74.537	Cavia_aperea
ENSGACG00000016772	NCBP1	94	81.423	ENSCPOG00000012573	NCBP1	98	81.818	Cavia_porcellus
ENSGACG00000016772	NCBP1	98	81.807	ENSCCAG00000032297	NCBP1	99	82.183	Cebus_capucinus
ENSGACG00000016772	NCBP1	98	81.807	ENSCATG00000010052	NCBP1	99	82.203	Cercocebus_atys
ENSGACG00000016772	NCBP1	99	80.976	ENSCLAG00000014339	NCBP1	99	82.183	Chinchilla_lanigera
ENSGACG00000016772	NCBP1	98	81.807	ENSCSAG00000010929	NCBP1	99	82.183	Chlorocebus_sabaeus
ENSGACG00000016772	NCBP1	88	82.075	ENSCHOG00000010332	NCBP1	91	78.261	Choloepus_hoffmanni
ENSGACG00000016772	NCBP1	98	79.548	ENSCPBG00000024344	NCBP1	99	81.706	Chrysemys_picta_bellii
ENSGACG00000016772	NCBP1	98	54.271	ENSCING00000008990	-	99	54.271	Ciona_intestinalis
ENSGACG00000016772	NCBP1	99	52.984	ENSCSAVG00000005300	-	99	54.082	Ciona_savignyi
ENSGACG00000016772	NCBP1	98	81.807	ENSCANG00000036913	NCBP1	99	82.183	Colobus_angolensis_palliatus
ENSGACG00000016772	NCBP1	98	81.179	ENSCGRG00001015771	Ncbp1	99	81.576	Cricetulus_griseus_chok1gshd
ENSGACG00000016772	NCBP1	97	81.194	ENSCGRG00000010311	Ncbp1	99	81.576	Cricetulus_griseus_crigri
ENSGACG00000016772	NCBP1	99	93.609	ENSCSEG00000012377	NCBP1	100	93.609	Cynoglossus_semilaevis
ENSGACG00000016772	NCBP1	99	92.491	ENSCVAG00000008795	NCBP1	100	92.491	Cyprinodon_variegatus
ENSGACG00000016772	NCBP1	98	80.928	ENSDNOG00000006885	NCBP1	99	81.305	Dasypus_novemcinctus
ENSGACG00000016772	NCBP1	98	77.528	ENSDORG00000013652	Ncbp1	99	77.903	Dipodomys_ordii
ENSGACG00000016772	NCBP1	98	57.697	FBgn0022942	Cbp80	99	57.697	Drosophila_melanogaster
ENSGACG00000016772	NCBP1	82	33.529	FBgn0038887	CG7907	87	33.529	Drosophila_melanogaster
ENSGACG00000016772	NCBP1	88	77.155	ENSETEG00000009705	NCBP1	89	77.155	Echinops_telfairi
ENSGACG00000016772	NCBP1	98	72.898	ENSEBUG00000008386	NCBP1	99	72.898	Eptatretus_burgeri
ENSGACG00000016772	NCBP1	98	81.556	ENSEASG00005022795	NCBP1	99	81.932	Equus_asinus_asinus
ENSGACG00000016772	NCBP1	98	81.681	ENSECAG00000013847	NCBP1	99	82.058	Equus_caballus
ENSGACG00000016772	NCBP1	94	78.026	ENSEEUG00000015973	NCBP1	99	78.421	Erinaceus_europaeus
ENSGACG00000016772	NCBP1	99	89.850	ENSELUG00000022519	NCBP1	100	89.850	Esox_lucius
ENSGACG00000016772	NCBP1	98	81.932	ENSFCAG00000001206	NCBP1	99	82.309	Felis_catus
ENSGACG00000016772	NCBP1	97	81.957	ENSFALG00000001193	NCBP1	99	82.465	Ficedula_albicollis
ENSGACG00000016772	NCBP1	98	81.556	ENSFDAG00000010864	NCBP1	99	81.932	Fukomys_damarensis
ENSGACG00000016772	NCBP1	99	92.741	ENSFHEG00000000655	NCBP1	100	92.741	Fundulus_heteroclitus
ENSGACG00000016772	NCBP1	99	90.000	ENSGMOG00000008653	NCBP1	99	90.000	Gadus_morhua
ENSGACG00000016772	NCBP1	97	82.398	ENSGALG00000002087	NCBP1	99	82.206	Gallus_gallus
ENSGACG00000016772	NCBP1	99	93.617	ENSGAFG00000017787	NCBP1	100	93.617	Gambusia_affinis
ENSGACG00000016772	NCBP1	97	82.675	ENSGAGG00000019483	NCBP1	98	83.057	Gopherus_agassizii
ENSGACG00000016772	NCBP1	98	81.807	ENSGGOG00000001376	NCBP1	99	82.183	Gorilla_gorilla
ENSGACG00000016772	NCBP1	99	93.233	ENSHBUG00000020843	NCBP1	100	93.233	Haplochromis_burtoni
ENSGACG00000016772	NCBP1	98	71.589	ENSHGLG00000018112	-	99	71.589	Heterocephalus_glaber_female
ENSGACG00000016772	NCBP1	98	81.681	ENSHGLG00000001882	NCBP1	99	82.058	Heterocephalus_glaber_female
ENSGACG00000016772	NCBP1	98	81.681	ENSHGLG00100013014	NCBP1	99	82.058	Heterocephalus_glaber_male
ENSGACG00000016772	NCBP1	98	71.339	ENSHGLG00100017373	-	99	71.339	Heterocephalus_glaber_male
ENSGACG00000016772	NCBP1	76	84.304	ENSHCOG00000000204	NCBP1	91	84.304	Hippocampus_comes
ENSGACG00000016772	NCBP1	99	88.596	ENSIPUG00000007275	ncbp1	100	88.596	Ictalurus_punctatus
ENSGACG00000016772	NCBP1	98	81.681	ENSSTOG00000002695	NCBP1	99	82.058	Ictidomys_tridecemlineatus
ENSGACG00000016772	NCBP1	99	93.358	ENSKMAG00000003594	NCBP1	100	93.358	Kryptolebias_marmoratus
ENSGACG00000016772	NCBP1	99	93.078	ENSLBEG00000011661	NCBP1	100	93.078	Labrus_bergylta
ENSGACG00000016772	NCBP1	98	77.736	ENSLACG00000013955	NCBP1	99	77.736	Latimeria_chalumnae
ENSGACG00000016772	NCBP1	98	76.055	ENSLOCG00000009579	NCBP1	99	76.551	Lepisosteus_oculatus
ENSGACG00000016772	NCBP1	98	81.932	ENSLAFG00000005999	NCBP1	99	82.309	Loxodonta_africana
ENSGACG00000016772	NCBP1	98	81.807	ENSMFAG00000030994	NCBP1	99	82.203	Macaca_fascicularis
ENSGACG00000016772	NCBP1	97	81.783	ENSMMUG00000012281	NCBP1	99	82.203	Macaca_mulatta
ENSGACG00000016772	NCBP1	98	81.807	ENSMNEG00000042790	NCBP1	99	82.183	Macaca_nemestrina
ENSGACG00000016772	NCBP1	98	81.807	ENSMLEG00000030374	NCBP1	99	82.183	Mandrillus_leucophaeus
ENSGACG00000016772	NCBP1	99	93.609	ENSMAMG00000014806	NCBP1	100	93.609	Mastacembelus_armatus
ENSGACG00000016772	NCBP1	99	93.233	ENSMZEG00005003469	NCBP1	100	93.233	Maylandia_zebra
ENSGACG00000016772	NCBP1	96	91.495	ENSMZEG00005009290	-	100	91.495	Maylandia_zebra
ENSGACG00000016772	NCBP1	98	80.706	ENSMAUG00000020583	Ncbp1	99	81.084	Mesocricetus_auratus
ENSGACG00000016772	NCBP1	98	81.305	ENSMICG00000012682	NCBP1	99	81.681	Microcebus_murinus
ENSGACG00000016772	NCBP1	98	81.054	ENSMOCG00000015818	Ncbp1	99	81.430	Microtus_ochrogaster
ENSGACG00000016772	NCBP1	89	93.223	ENSMMOG00000002610	NCBP1	100	93.223	Mola_mola
ENSGACG00000016772	NCBP1	98	80.678	ENSMODG00000003202	NCBP1	99	80.803	Monodelphis_domestica
ENSGACG00000016772	NCBP1	99	93.734	ENSMALG00000003547	NCBP1	100	93.734	Monopterus_albus
ENSGACG00000016772	NCBP1	98	81.305	MGP_CAROLIEiJ_G0025982	Ncbp1	99	81.681	Mus_caroli
ENSGACG00000016772	NCBP1	98	81.305	ENSMUSG00000028330	Ncbp1	99	81.681	Mus_musculus
ENSGACG00000016772	NCBP1	98	81.305	MGP_PahariEiJ_G0028318	Ncbp1	99	81.681	Mus_pahari
ENSGACG00000016772	NCBP1	98	81.305	MGP_SPRETEiJ_G0026945	Ncbp1	99	81.681	Mus_spretus
ENSGACG00000016772	NCBP1	98	82.183	ENSMPUG00000006399	NCBP1	99	82.560	Mustela_putorius_furo
ENSGACG00000016772	NCBP1	97	80.764	ENSMLUG00000015201	NCBP1	99	81.146	Myotis_lucifugus
ENSGACG00000016772	NCBP1	98	82.058	ENSNGAG00000014101	Ncbp1	99	82.166	Nannospalax_galili
ENSGACG00000016772	NCBP1	75	93.421	ENSNBRG00000014674	NCBP1	97	93.421	Neolamprologus_brichardi
ENSGACG00000016772	NCBP1	98	81.807	ENSNLEG00000016909	NCBP1	99	82.203	Nomascus_leucogenys
ENSGACG00000016772	NCBP1	87	81.211	ENSMEUG00000010672	NCBP1	90	81.211	Notamacropus_eugenii
ENSGACG00000016772	NCBP1	83	73.658	ENSOPRG00000002144	-	88	74.161	Ochotona_princeps
ENSGACG00000016772	NCBP1	98	81.681	ENSODEG00000003232	NCBP1	99	82.058	Octodon_degus
ENSGACG00000016772	NCBP1	99	93.108	ENSONIG00000001502	NCBP1	100	93.108	Oreochromis_niloticus
ENSGACG00000016772	NCBP1	77	84.912	ENSOANG00000001918	NCBP1	100	84.912	Ornithorhynchus_anatinus
ENSGACG00000016772	NCBP1	97	80.892	ENSOCUG00000013853	NCBP1	97	81.274	Oryctolagus_cuniculus
ENSGACG00000016772	NCBP1	99	93.250	ENSORLG00000011008	NCBP1	100	93.250	Oryzias_latipes
ENSGACG00000016772	NCBP1	99	93.500	ENSORLG00020017455	NCBP1	100	93.500	Oryzias_latipes_hni
ENSGACG00000016772	NCBP1	99	93.375	ENSORLG00015012127	NCBP1	100	93.375	Oryzias_latipes_hsok
ENSGACG00000016772	NCBP1	99	93.875	ENSOMEG00000020698	NCBP1	100	93.875	Oryzias_melastigma
ENSGACG00000016772	NCBP1	98	81.704	ENSOGAG00000013888	NCBP1	99	82.080	Otolemur_garnettii
ENSGACG00000016772	NCBP1	98	81.807	ENSOARG00000011233	NCBP1	99	82.183	Ovis_aries
ENSGACG00000016772	NCBP1	98	81.807	ENSPPAG00000026462	NCBP1	99	82.183	Pan_paniscus
ENSGACG00000016772	NCBP1	98	82.058	ENSPPRG00000022574	NCBP1	99	82.434	Panthera_pardus
ENSGACG00000016772	NCBP1	98	82.058	ENSPTIG00000018507	NCBP1	99	82.434	Panthera_tigris_altaica
ENSGACG00000016772	NCBP1	98	81.807	ENSPTRG00000021167	NCBP1	99	82.183	Pan_troglodytes
ENSGACG00000016772	NCBP1	98	81.807	ENSPANG00000025591	NCBP1	99	82.203	Papio_anubis
ENSGACG00000016772	NCBP1	98	85.822	ENSPKIG00000015861	NCBP1	99	85.822	Paramormyrops_kingsleyae
ENSGACG00000016772	NCBP1	63	79.922	ENSPSIG00000009558	NCBP1	99	80.702	Pelodiscus_sinensis
ENSGACG00000016772	NCBP1	99	89.513	ENSPMGG00000020476	NCBP1	100	89.513	Periophthalmus_magnuspinnatus
ENSGACG00000016772	NCBP1	98	80.803	ENSPEMG00000020105	Ncbp1	99	81.179	Peromyscus_maniculatus_bairdii
ENSGACG00000016772	NCBP1	98	67.497	ENSPMAG00000005533	NCBP1	99	67.497	Petromyzon_marinus
ENSGACG00000016772	NCBP1	98	80.678	ENSPCIG00000015800	NCBP1	99	82.895	Phascolarctos_cinereus
ENSGACG00000016772	NCBP1	99	93.375	ENSPFOG00000004158	NCBP1	100	93.375	Poecilia_formosa
ENSGACG00000016772	NCBP1	99	93.617	ENSPLAG00000020002	NCBP1	100	93.617	Poecilia_latipinna
ENSGACG00000016772	NCBP1	99	93.492	ENSPMEG00000019821	NCBP1	100	93.492	Poecilia_mexicana
ENSGACG00000016772	NCBP1	99	93.867	ENSPREG00000006035	NCBP1	100	93.867	Poecilia_reticulata
ENSGACG00000016772	NCBP1	98	81.807	ENSPPYG00000019426	NCBP1	99	82.183	Pongo_abelii
ENSGACG00000016772	NCBP1	88	79.518	ENSPCAG00000009943	NCBP1	90	79.518	Procavia_capensis
ENSGACG00000016772	NCBP1	80	86.842	ENSPCOG00000020024	NCBP1	98	86.842	Propithecus_coquereli
ENSGACG00000016772	NCBP1	98	81.807	ENSPVAG00000005924	NCBP1	99	82.183	Pteropus_vampyrus
ENSGACG00000016772	NCBP1	89	92.659	ENSPNYG00000002140	NCBP1	99	92.659	Pundamilia_nyererei
ENSGACG00000016772	NCBP1	99	89.362	ENSPNAG00000027753	NCBP1	100	89.362	Pygocentrus_nattereri
ENSGACG00000016772	NCBP1	98	81.305	ENSRNOG00000023605	Ncbp1	99	81.681	Rattus_norvegicus
ENSGACG00000016772	NCBP1	98	81.807	ENSRBIG00000043175	NCBP1	99	82.203	Rhinopithecus_bieti
ENSGACG00000016772	NCBP1	98	81.807	ENSRROG00000029767	NCBP1	99	82.183	Rhinopithecus_roxellana
ENSGACG00000016772	NCBP1	98	81.807	ENSSBOG00000019378	NCBP1	98	86.829	Saimiri_boliviensis_boliviensis
ENSGACG00000016772	NCBP1	69	76.515	ENSSHAG00000015882	NCBP1	73	77.186	Sarcophilus_harrisii
ENSGACG00000016772	NCBP1	97	85.987	ENSSFOG00015001872	NCBP1	99	85.194	Scleropages_formosus
ENSGACG00000016772	NCBP1	99	93.484	ENSSMAG00000007463	NCBP1	100	93.484	Scophthalmus_maximus
ENSGACG00000016772	NCBP1	99	93.860	ENSSDUG00000007019	NCBP1	100	94.536	Seriola_dumerili
ENSGACG00000016772	NCBP1	99	94.737	ENSSLDG00000021924	NCBP1	100	94.737	Seriola_lalandi_dorsalis
ENSGACG00000016772	NCBP1	84	70.690	ENSSARG00000007274	NCBP1	86	71.336	Sorex_araneus
ENSGACG00000016772	NCBP1	98	75.910	ENSSPUG00000008609	NCBP1	99	76.035	Sphenodon_punctatus
ENSGACG00000016772	NCBP1	99	95.113	ENSSPAG00000012550	NCBP1	100	95.113	Stegastes_partitus
ENSGACG00000016772	NCBP1	98	81.807	ENSSSCG00000005366	NCBP1	99	82.183	Sus_scrofa
ENSGACG00000016772	NCBP1	98	76.788	ENSTGUG00000001472	NCBP1	99	77.541	Taeniopygia_guttata
ENSGACG00000016772	NCBP1	99	92.481	ENSTRUG00000005287	NCBP1	100	92.481	Takifugu_rubripes
ENSGACG00000016772	NCBP1	98	79.297	ENSTBEG00000004035	NCBP1	99	79.674	Tupaia_belangeri
ENSGACG00000016772	NCBP1	87	85.294	ENSTTRG00000000507	NCBP1	88	85.294	Tursiops_truncatus
ENSGACG00000016772	NCBP1	98	81.932	ENSUAMG00000005471	NCBP1	99	82.309	Ursus_americanus
ENSGACG00000016772	NCBP1	96	80.000	ENSUMAG00000011865	NCBP1	99	82.003	Ursus_maritimus
ENSGACG00000016772	NCBP1	98	78.419	ENSVPAG00000010537	NCBP1	99	78.795	Vicugna_pacos
ENSGACG00000016772	NCBP1	98	82.058	ENSVVUG00000019725	NCBP1	99	82.434	Vulpes_vulpes
ENSGACG00000016772	NCBP1	98	77.415	ENSXETG00000010179	ncbp1	99	77.415	Xenopus_tropicalis
ENSGACG00000016772	NCBP1	99	93.617	ENSXMAG00000018253	NCBP1	100	93.617	Xiphophorus_maculatus