EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000016888 (Gene tree)
Gene ID: -
Gene Symbol: frg1
Alias: zgc:112426
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7554 bases
Position: chrgroupIX:5862469-5870022
Accession: ZDB-GENE-050417-324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022319	FRG1	PF06229.12	1.3e-81	1	1
ENSGACP00000022317	FRG1	PF06229.12	9e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022361	-	768	-	ENSGACP00000022319	255 (aa)	-	G3PXI0
ENSGACT00000022359	-	771	-	ENSGACP00000022317	256 (aa)	-	G3PXH8

Gene Model

Click here to download ENSGACG00000016888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016888	frg1	100	71.318	ENSG00000109536	FRG1	100	80.172	Homo_sapiens
ENSGACG00000016888	frg1	100	84.314	ENSAPOG00000001060	frg1	100	84.314	Acanthochromis_polyacanthus
ENSGACG00000016888	frg1	100	70.543	ENSAMEG00000013503	FRG1	100	72.481	Ailuropoda_melanoleuca
ENSGACG00000016888	frg1	87	82.883	ENSACIG00000022283	frg1	100	82.883	Amphilophus_citrinellus
ENSGACG00000016888	frg1	88	83.482	ENSAOCG00000024240	frg1	87	83.857	Amphiprion_ocellaris
ENSGACG00000016888	frg1	100	84.314	ENSAPEG00000002486	frg1	100	84.314	Amphiprion_percula
ENSGACG00000016888	frg1	100	83.922	ENSATEG00000010414	frg1	100	83.922	Anabas_testudineus
ENSGACG00000016888	frg1	100	71.875	ENSAPLG00000007785	-	100	71.094	Anas_platyrhynchos
ENSGACG00000016888	frg1	100	71.484	ENSACAG00000006877	-	100	71.094	Anolis_carolinensis
ENSGACG00000016888	frg1	100	72.374	ENSANAG00000020876	FRG1	100	72.374	Aotus_nancymaae
ENSGACG00000016888	frg1	100	76.078	ENSACLG00000027065	frg1	100	76.078	Astatotilapia_calliptera
ENSGACG00000016888	frg1	100	77.734	ENSAMXG00000032700	frg1	100	77.734	Astyanax_mexicanus
ENSGACG00000016888	frg1	100	70.543	ENSBTAG00000007089	FRG1	100	72.481	Bos_taurus
ENSGACG00000016888	frg1	99	41.304	WBGene00014177	frg-1	99	43.223	Caenorhabditis_elegans
ENSGACG00000016888	frg1	100	72.374	ENSCJAG00000011272	FRG1	100	72.374	Callithrix_jacchus
ENSGACG00000016888	frg1	100	70.543	ENSCAFG00000007135	FRG1	100	72.481	Canis_familiaris
ENSGACG00000016888	frg1	83	75.000	ENSCAFG00020000082	-	85	75.000	Canis_lupus_dingo
ENSGACG00000016888	frg1	100	70.543	ENSCHIG00000011585	-	100	72.481	Capra_hircus
ENSGACG00000016888	frg1	98	50.794	ENSTSYG00000031599	-	100	50.794	Carlito_syrichta
ENSGACG00000016888	frg1	87	73.094	ENSCAPG00000016056	-	91	73.094	Cavia_aperea
ENSGACG00000016888	frg1	100	71.595	ENSCPOG00000022277	-	100	71.206	Cavia_porcellus
ENSGACG00000016888	frg1	100	72.374	ENSCCAG00000024627	FRG1	100	72.374	Cebus_capucinus
ENSGACG00000016888	frg1	100	70.930	ENSCATG00000029230	FRG1	100	72.868	Cercocebus_atys
ENSGACG00000016888	frg1	100	57.364	ENSCLAG00000004960	-	100	58.527	Chinchilla_lanigera
ENSGACG00000016888	frg1	100	52.549	ENSCLAG00000006068	-	100	52.549	Chinchilla_lanigera
ENSGACG00000016888	frg1	100	71.595	ENSCLAG00000000370	-	100	71.595	Chinchilla_lanigera
ENSGACG00000016888	frg1	99	50.198	ENSCLAG00000009263	-	100	50.198	Chinchilla_lanigera
ENSGACG00000016888	frg1	83	71.698	ENSCSAG00000017729	-	98	71.698	Chlorocebus_sabaeus
ENSGACG00000016888	frg1	100	70.930	ENSCSAG00000002899	FRG1	100	72.868	Chlorocebus_sabaeus
ENSGACG00000016888	frg1	86	74.661	ENSCPBG00000009211	-	86	74.661	Chrysemys_picta_bellii
ENSGACG00000016888	frg1	83	53.488	ENSCING00000005161	-	99	48.881	Ciona_intestinalis
ENSGACG00000016888	frg1	51	58.779	ENSCSAVG00000008018	-	100	51.087	Ciona_savignyi
ENSGACG00000016888	frg1	100	70.930	ENSCANG00000020991	FRG1	100	72.868	Colobus_angolensis_palliatus
ENSGACG00000016888	frg1	100	70.930	ENSCGRG00001014998	Frg1	100	72.868	Cricetulus_griseus_chok1gshd
ENSGACG00000016888	frg1	100	57.588	ENSCGRG00000003902	-	96	59.144	Cricetulus_griseus_crigri
ENSGACG00000016888	frg1	100	70.930	ENSCGRG00000011860	-	100	72.868	Cricetulus_griseus_crigri
ENSGACG00000016888	frg1	96	78.689	ENSCSEG00000015950	frg1	100	78.689	Cynoglossus_semilaevis
ENSGACG00000016888	frg1	100	79.608	ENSCVAG00000009985	frg1	100	79.608	Cyprinodon_variegatus
ENSGACG00000016888	frg1	100	79.297	ENSDARG00000056504	frg1	100	84.507	Danio_rerio
ENSGACG00000016888	frg1	100	70.543	ENSDNOG00000014886	FRG1	100	70.155	Dasypus_novemcinctus
ENSGACG00000016888	frg1	100	62.016	ENSDORG00000016190	Frg1	100	64.341	Dipodomys_ordii
ENSGACG00000016888	frg1	100	47.909	FBgn0036964	FRG1	100	47.909	Drosophila_melanogaster
ENSGACG00000016888	frg1	100	70.155	ENSETEG00000012349	-	100	71.318	Echinops_telfairi
ENSGACG00000016888	frg1	59	51.333	ENSEBUG00000014053	frg1	67	56.911	Eptatretus_burgeri
ENSGACG00000016888	frg1	100	71.984	ENSEASG00005017497	FRG1	100	71.984	Equus_asinus_asinus
ENSGACG00000016888	frg1	100	71.984	ENSECAG00000003122	FRG1	100	71.984	Equus_caballus
ENSGACG00000016888	frg1	62	73.885	ENSEEUG00000000145	-	100	73.885	Erinaceus_europaeus
ENSGACG00000016888	frg1	100	80.000	ENSELUG00000021712	frg1	100	80.000	Esox_lucius
ENSGACG00000016888	frg1	100	70.543	ENSFCAG00000025737	FRG1	100	72.481	Felis_catus
ENSGACG00000016888	frg1	87	71.622	ENSFALG00000011231	-	87	71.622	Ficedula_albicollis
ENSGACG00000016888	frg1	100	61.154	ENSFDAG00000012697	-	98	66.822	Fukomys_damarensis
ENSGACG00000016888	frg1	100	71.206	ENSFDAG00000000962	-	100	71.595	Fukomys_damarensis
ENSGACG00000016888	frg1	100	80.392	ENSFHEG00000010540	frg1	100	80.392	Fundulus_heteroclitus
ENSGACG00000016888	frg1	100	80.078	ENSGMOG00000000867	frg1	100	80.078	Gadus_morhua
ENSGACG00000016888	frg1	100	71.094	ENSGALG00000013590	-	100	70.312	Gallus_gallus
ENSGACG00000016888	frg1	81	75.845	ENSGAFG00000013855	frg1	100	75.845	Gambusia_affinis
ENSGACG00000016888	frg1	100	71.984	ENSGAGG00000025012	-	100	71.206	Gopherus_agassizii
ENSGACG00000016888	frg1	68	69.714	ENSGGOG00000012888	-	86	70.175	Gorilla_gorilla
ENSGACG00000016888	frg1	100	45.627	ENSGGOG00000040796	-	100	47.529	Gorilla_gorilla
ENSGACG00000016888	frg1	100	81.569	ENSHBUG00000010667	frg1	100	81.569	Haplochromis_burtoni
ENSGACG00000016888	frg1	100	60.547	ENSHGLG00000001211	-	100	60.547	Heterocephalus_glaber_female
ENSGACG00000016888	frg1	99	68.359	ENSHGLG00000020402	-	94	67.969	Heterocephalus_glaber_female
ENSGACG00000016888	frg1	100	71.984	ENSHGLG00000005601	FRG1	100	71.595	Heterocephalus_glaber_female
ENSGACG00000016888	frg1	99	67.969	ENSHGLG00000020943	-	99	68.359	Heterocephalus_glaber_female
ENSGACG00000016888	frg1	100	58.203	ENSHGLG00100015285	-	100	57.031	Heterocephalus_glaber_male
ENSGACG00000016888	frg1	100	72.374	ENSHGLG00100016261	-	100	71.984	Heterocephalus_glaber_male
ENSGACG00000016888	frg1	100	60.938	ENSHGLG00100010674	-	100	60.938	Heterocephalus_glaber_male
ENSGACG00000016888	frg1	99	67.969	ENSHGLG00100021211	-	99	68.359	Heterocephalus_glaber_male
ENSGACG00000016888	frg1	88	78.222	ENSHCOG00000000224	frg1	96	78.222	Hippocampus_comes
ENSGACG00000016888	frg1	100	74.319	ENSIPUG00000022716	frg1	100	75.097	Ictalurus_punctatus
ENSGACG00000016888	frg1	100	72.093	ENSSTOG00000002857	-	100	72.093	Ictidomys_tridecemlineatus
ENSGACG00000016888	frg1	100	70.155	ENSJJAG00000020625	Frg1	100	72.093	Jaculus_jaculus
ENSGACG00000016888	frg1	100	80.784	ENSKMAG00000005841	frg1	100	80.784	Kryptolebias_marmoratus
ENSGACG00000016888	frg1	100	86.667	ENSLBEG00000001466	frg1	100	86.667	Labrus_bergylta
ENSGACG00000016888	frg1	100	62.069	ENSLACG00000010243	frg1	100	64.368	Latimeria_chalumnae
ENSGACG00000016888	frg1	100	78.906	ENSLOCG00000013868	frg1	100	78.906	Lepisosteus_oculatus
ENSGACG00000016888	frg1	100	70.155	ENSLAFG00000011191	FRG1	100	70.155	Loxodonta_africana
ENSGACG00000016888	frg1	83	65.421	ENSMFAG00000042873	-	89	65.421	Macaca_fascicularis
ENSGACG00000016888	frg1	100	70.930	ENSMFAG00000031178	FRG1	100	72.868	Macaca_fascicularis
ENSGACG00000016888	frg1	79	65.025	ENSMMUG00000047496	-	87	65.025	Macaca_mulatta
ENSGACG00000016888	frg1	100	70.930	ENSMMUG00000001824	FRG1	100	72.868	Macaca_mulatta
ENSGACG00000016888	frg1	96	65.992	ENSMNEG00000018620	FRG1	100	68.016	Macaca_nemestrina
ENSGACG00000016888	frg1	100	70.930	ENSMLEG00000028881	FRG1	100	72.868	Mandrillus_leucophaeus
ENSGACG00000016888	frg1	100	82.745	ENSMAMG00000012406	frg1	100	82.745	Mastacembelus_armatus
ENSGACG00000016888	frg1	100	81.176	ENSMZEG00005007549	frg1	100	81.176	Maylandia_zebra
ENSGACG00000016888	frg1	100	71.484	ENSMGAG00000011481	-	100	70.703	Meleagris_gallopavo
ENSGACG00000016888	frg1	100	70.930	ENSMAUG00000000847	Frg1	100	72.868	Mesocricetus_auratus
ENSGACG00000016888	frg1	100	70.930	ENSMICG00000046816	FRG1	100	72.868	Microcebus_murinus
ENSGACG00000016888	frg1	100	64.981	ENSMOCG00000023000	Frg1	100	66.926	Microtus_ochrogaster
ENSGACG00000016888	frg1	88	82.143	ENSMMOG00000004008	frg1	95	82.143	Mola_mola
ENSGACG00000016888	frg1	100	70.543	ENSMODG00000019031	-	87	72.093	Monodelphis_domestica
ENSGACG00000016888	frg1	100	82.745	ENSMALG00000018497	frg1	100	82.745	Monopterus_albus
ENSGACG00000016888	frg1	100	70.543	MGP_CAROLIEiJ_G0031006	Frg1	100	72.481	Mus_caroli
ENSGACG00000016888	frg1	100	70.543	ENSMUSG00000031590	Frg1	100	72.481	Mus_musculus
ENSGACG00000016888	frg1	100	70.155	MGP_PahariEiJ_G0021475	Frg1	100	72.093	Mus_pahari
ENSGACG00000016888	frg1	100	70.155	MGP_SPRETEiJ_G0032120	Frg1	100	72.093	Mus_spretus
ENSGACG00000016888	frg1	100	70.543	ENSMPUG00000017962	FRG1	100	72.481	Mustela_putorius_furo
ENSGACG00000016888	frg1	100	71.984	ENSMLUG00000023179	FRG1	100	71.984	Myotis_lucifugus
ENSGACG00000016888	frg1	100	70.543	ENSNGAG00000016411	Frg1	100	72.481	Nannospalax_galili
ENSGACG00000016888	frg1	81	73.913	ENSNBRG00000006806	frg1	95	73.913	Neolamprologus_brichardi
ENSGACG00000016888	frg1	79	66.169	ENSNLEG00000028874	-	91	66.169	Nomascus_leucogenys
ENSGACG00000016888	frg1	100	60.853	ENSNLEG00000032333	-	100	60.853	Nomascus_leucogenys
ENSGACG00000016888	frg1	100	62.452	ENSNLEG00000035849	-	100	63.218	Nomascus_leucogenys
ENSGACG00000016888	frg1	79	67.662	ENSNLEG00000036059	-	86	67.662	Nomascus_leucogenys
ENSGACG00000016888	frg1	100	71.206	ENSNLEG00000000930	FRG1	100	71.984	Nomascus_leucogenys
ENSGACG00000016888	frg1	100	52.344	ENSNLEG00000032846	-	100	63.393	Nomascus_leucogenys
ENSGACG00000016888	frg1	60	72.368	ENSMEUG00000007509	-	59	72.368	Notamacropus_eugenii
ENSGACG00000016888	frg1	100	60.700	ENSOPRG00000004722	-	100	62.403	Ochotona_princeps
ENSGACG00000016888	frg1	100	57.031	ENSODEG00000006953	-	100	56.250	Octodon_degus
ENSGACG00000016888	frg1	100	71.595	ENSODEG00000006458	-	100	71.595	Octodon_degus
ENSGACG00000016888	frg1	100	82.031	ENSONIG00000010162	frg1	100	82.031	Oreochromis_niloticus
ENSGACG00000016888	frg1	67	73.684	ENSOANG00000005659	-	76	73.684	Ornithorhynchus_anatinus
ENSGACG00000016888	frg1	100	70.155	ENSOCUG00000009038	-	100	72.093	Oryctolagus_cuniculus
ENSGACG00000016888	frg1	96	82.041	ENSORLG00000008106	frg1	89	82.041	Oryzias_latipes
ENSGACG00000016888	frg1	100	82.812	ENSORLG00020014355	frg1	100	82.812	Oryzias_latipes_hni
ENSGACG00000016888	frg1	100	82.812	ENSORLG00015014159	frg1	100	82.812	Oryzias_latipes_hsok
ENSGACG00000016888	frg1	88	73.894	ENSOMEG00000002468	frg1	93	73.894	Oryzias_melastigma
ENSGACG00000016888	frg1	100	70.155	ENSOGAG00000005749	-	100	70.155	Otolemur_garnettii
ENSGACG00000016888	frg1	100	68.966	ENSOARG00000008592	FRG1	100	70.881	Ovis_aries
ENSGACG00000016888	frg1	96	53.668	ENSPPAG00000043174	-	100	53.543	Pan_paniscus
ENSGACG00000016888	frg1	84	71.296	ENSPPAG00000043170	-	100	73.611	Pan_paniscus
ENSGACG00000016888	frg1	100	70.155	ENSPPRG00000025003	-	100	72.093	Panthera_pardus
ENSGACG00000016888	frg1	100	69.650	ENSPPRG00000019777	-	100	69.650	Panthera_pardus
ENSGACG00000016888	frg1	100	70.543	ENSPTIG00000006588	-	100	72.481	Panthera_tigris_altaica
ENSGACG00000016888	frg1	100	70.039	ENSPTIG00000006566	-	100	70.039	Panthera_tigris_altaica
ENSGACG00000016888	frg1	95	58.776	ENSPTRG00000052363	-	97	64.423	Pan_troglodytes
ENSGACG00000016888	frg1	88	62.338	ENSPTRG00000043123	-	94	61.373	Pan_troglodytes
ENSGACG00000016888	frg1	100	71.318	ENSPTRG00000016671	-	100	73.256	Pan_troglodytes
ENSGACG00000016888	frg1	96	59.109	ENSPTRG00000050204	-	100	59.109	Pan_troglodytes
ENSGACG00000016888	frg1	96	58.704	ENSPTRG00000044710	-	100	58.704	Pan_troglodytes
ENSGACG00000016888	frg1	100	71.318	ENSPTRG00000050205	-	100	73.256	Pan_troglodytes
ENSGACG00000016888	frg1	82	59.155	ENSPANG00000031530	-	84	69.444	Papio_anubis
ENSGACG00000016888	frg1	100	71.875	ENSPKIG00000024189	frg1	100	74.609	Paramormyrops_kingsleyae
ENSGACG00000016888	frg1	84	75.463	ENSPSIG00000017971	-	82	75.463	Pelodiscus_sinensis
ENSGACG00000016888	frg1	98	73.413	ENSPMGG00000019273	frg1	100	73.494	Periophthalmus_magnuspinnatus
ENSGACG00000016888	frg1	100	70.930	ENSPEMG00000000650	Frg1	100	72.868	Peromyscus_maniculatus_bairdii
ENSGACG00000016888	frg1	100	70.543	ENSPCIG00000007530	-	69	70.543	Phascolarctos_cinereus
ENSGACG00000016888	frg1	100	80.000	ENSPFOG00000006721	frg1	100	80.000	Poecilia_formosa
ENSGACG00000016888	frg1	100	80.000	ENSPMEG00000013816	frg1	100	80.000	Poecilia_mexicana
ENSGACG00000016888	frg1	100	79.608	ENSPREG00000000097	frg1	100	79.608	Poecilia_reticulata
ENSGACG00000016888	frg1	62	68.354	ENSPPYG00000011275	-	87	68.354	Pongo_abelii
ENSGACG00000016888	frg1	57	76.552	ENSPPYG00000029810	-	100	76.552	Pongo_abelii
ENSGACG00000016888	frg1	95	67.480	ENSPCAG00000014953	-	100	69.106	Procavia_capensis
ENSGACG00000016888	frg1	79	57.353	ENSPCOG00000022726	FRG1	95	59.804	Propithecus_coquereli
ENSGACG00000016888	frg1	100	57.752	ENSPVAG00000010551	FRG1	100	60.078	Pteropus_vampyrus
ENSGACG00000016888	frg1	67	84.795	ENSPNYG00000015209	frg1	74	84.795	Pundamilia_nyererei
ENSGACG00000016888	frg1	100	75.294	ENSPNAG00000013259	frg1	100	73.643	Pygocentrus_nattereri
ENSGACG00000016888	frg1	100	70.543	ENSRNOG00000009846	Frg1	100	70.543	Rattus_norvegicus
ENSGACG00000016888	frg1	87	70.089	ENSRBIG00000042219	-	94	72.000	Rhinopithecus_bieti
ENSGACG00000016888	frg1	82	68.246	ENSRROG00000032084	-	88	68.246	Rhinopithecus_roxellana
ENSGACG00000016888	frg1	100	68.605	ENSRROG00000015523	FRG1	100	70.543	Rhinopithecus_roxellana
ENSGACG00000016888	frg1	100	72.374	ENSSBOG00000034175	FRG1	100	72.374	Saimiri_boliviensis_boliviensis
ENSGACG00000016888	frg1	100	70.155	ENSSHAG00000005886	-	100	70.155	Sarcophilus_harrisii
ENSGACG00000016888	frg1	97	75.502	ENSSFOG00015021361	frg1	99	75.502	Scleropages_formosus
ENSGACG00000016888	frg1	100	85.098	ENSSMAG00000001213	frg1	100	85.098	Scophthalmus_maximus
ENSGACG00000016888	frg1	100	87.843	ENSSDUG00000018886	frg1	100	87.843	Seriola_dumerili
ENSGACG00000016888	frg1	100	87.451	ENSSLDG00000024191	frg1	100	87.451	Seriola_lalandi_dorsalis
ENSGACG00000016888	frg1	66	74.118	ENSSARG00000002471	-	93	73.563	Sorex_araneus
ENSGACG00000016888	frg1	100	69.804	ENSSPUG00000017326	-	100	69.412	Sphenodon_punctatus
ENSGACG00000016888	frg1	100	76.863	ENSSPAG00000013294	frg1	100	76.863	Stegastes_partitus
ENSGACG00000016888	frg1	100	70.930	ENSSSCG00000006996	FRG1	100	72.868	Sus_scrofa
ENSGACG00000016888	frg1	100	70.703	ENSTGUG00000007028	-	100	69.922	Taeniopygia_guttata
ENSGACG00000016888	frg1	100	80.392	ENSTRUG00000016208	frg1	100	80.392	Takifugu_rubripes
ENSGACG00000016888	frg1	100	78.824	ENSTNIG00000007128	frg1	100	78.824	Tetraodon_nigroviridis
ENSGACG00000016888	frg1	78	46.231	ENSTBEG00000017605	-	99	46.231	Tupaia_belangeri
ENSGACG00000016888	frg1	83	51.415	ENSTBEG00000012789	-	99	51.415	Tupaia_belangeri
ENSGACG00000016888	frg1	100	69.767	ENSTBEG00000014491	-	100	71.705	Tupaia_belangeri
ENSGACG00000016888	frg1	100	70.155	ENSTTRG00000003429	FRG1	100	72.093	Tursiops_truncatus
ENSGACG00000016888	frg1	96	68.548	ENSUAMG00000012123	-	100	67.755	Ursus_americanus
ENSGACG00000016888	frg1	100	70.543	ENSUMAG00000021119	FRG1	100	72.481	Ursus_maritimus
ENSGACG00000016888	frg1	100	68.217	ENSVPAG00000000616	FRG1	100	68.217	Vicugna_pacos
ENSGACG00000016888	frg1	87	73.094	ENSVPAG00000011977	-	94	73.094	Vicugna_pacos
ENSGACG00000016888	frg1	83	75.000	ENSVVUG00000007181	-	77	75.000	Vulpes_vulpes
ENSGACG00000016888	frg1	100	69.922	ENSXETG00000012470	frg1	100	69.922	Xenopus_tropicalis
ENSGACG00000016888	frg1	100	74.510	ENSXCOG00000005312	frg1	100	74.510	Xiphophorus_couchianus
ENSGACG00000016888	frg1	100	79.608	ENSXMAG00000007751	frg1	100	79.608	Xiphophorus_maculatus