EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000016927 (Gene tree)
Gene ID: -
Gene Symbol: trpt1
Alias: zgc:113138
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 4806 bases
Position: chrgroupIV:5215512-5220317
Accession: ZDB-GENE-050227-16
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022360	PTS_2-RNA	PF01885.16	4.1e-62	1	1
ENSGACP00000022365	PTS_2-RNA	PF01885.16	4.9e-62	1	1
ENSGACP00000022363	PTS_2-RNA	PF01885.16	4.2e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022405	-	546	-	ENSGACP00000022363	182 (aa)	-	G3PXM4
ENSGACT00000022407	-	678	-	ENSGACP00000022365	226 (aa)	-	G3PXM6
ENSGACT00000022402	-	959	-	ENSGACP00000022360	280 (aa)	-	G3PXM1

Gene Model

Click here to download ENSGACG00000016927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000016927's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000016927	trpt1	100	54.348	ENSG00000149743	TRPT1	87	54.762	Homo_sapiens
ENSGACG00000016927	trpt1	95	83.721	ENSAPOG00000012925	trpt1	87	82.500	Acanthochromis_polyacanthus
ENSGACG00000016927	trpt1	95	55.233	ENSAMEG00000018040	TRPT1	79	56.436	Ailuropoda_melanoleuca
ENSGACG00000016927	trpt1	95	80.347	ENSACIG00000022413	trpt1	88	81.407	Amphilophus_citrinellus
ENSGACG00000016927	trpt1	95	83.721	ENSAOCG00000001163	trpt1	76	83.000	Amphiprion_ocellaris
ENSGACG00000016927	trpt1	97	82.955	ENSAPEG00000009873	trpt1	89	82.673	Amphiprion_percula
ENSGACG00000016927	trpt1	96	84.000	ENSATEG00000014371	trpt1	86	84.264	Anabas_testudineus
ENSGACG00000016927	trpt1	94	59.649	ENSACAG00000000696	TRPT1	89	60.396	Anolis_carolinensis
ENSGACG00000016927	trpt1	100	54.783	ENSANAG00000019580	TRPT1	87	49.495	Aotus_nancymaae
ENSGACG00000016927	trpt1	95	81.395	ENSACLG00000016893	trpt1	87	81.500	Astatotilapia_calliptera
ENSGACG00000016927	trpt1	96	68.391	ENSAMXG00000010533	trpt1	87	70.051	Astyanax_mexicanus
ENSGACG00000016927	trpt1	99	53.275	ENSBTAG00000016555	TRPT1	86	54.802	Bos_taurus
ENSGACG00000016927	trpt1	100	53.017	ENSCJAG00000018169	TRPT1	80	55.172	Callithrix_jacchus
ENSGACG00000016927	trpt1	95	54.651	ENSCAFG00000014591	TRPT1	81	55.941	Canis_familiaris
ENSGACG00000016927	trpt1	95	54.651	ENSCAFG00020014101	TRPT1	82	55.941	Canis_lupus_dingo
ENSGACG00000016927	trpt1	100	52.609	ENSCHIG00000021308	TRPT1	81	55.941	Capra_hircus
ENSGACG00000016927	trpt1	94	52.907	ENSTSYG00000026766	TRPT1	98	40.805	Carlito_syrichta
ENSGACG00000016927	trpt1	95	55.814	ENSCAPG00000016934	TRPT1	83	57.711	Cavia_aperea
ENSGACG00000016927	trpt1	99	53.712	ENSCPOG00000002923	TRPT1	81	57.353	Cavia_porcellus
ENSGACG00000016927	trpt1	94	54.971	ENSCCAG00000025683	TRPT1	96	46.707	Cebus_capucinus
ENSGACG00000016927	trpt1	100	53.879	ENSCATG00000031563	TRPT1	80	55.882	Cercocebus_atys
ENSGACG00000016927	trpt1	96	55.046	ENSCLAG00000016380	TRPT1	80	56.931	Chinchilla_lanigera
ENSGACG00000016927	trpt1	100	54.545	ENSCSAG00000006952	TRPT1	80	56.650	Chlorocebus_sabaeus
ENSGACG00000016927	trpt1	79	41.781	ENSCING00000002405	-	77	41.781	Ciona_intestinalis
ENSGACG00000016927	trpt1	94	42.697	ENSCING00000024241	-	79	41.500	Ciona_intestinalis
ENSGACG00000016927	trpt1	90	42.771	ENSCSAVG00000011071	-	63	41.951	Ciona_savignyi
ENSGACG00000016927	trpt1	97	42.152	ENSCSAVG00000003949	-	89	43.781	Ciona_savignyi
ENSGACG00000016927	trpt1	100	53.247	ENSCANG00000042980	TRPT1	86	49.741	Colobus_angolensis_palliatus
ENSGACG00000016927	trpt1	99	52.679	ENSCGRG00001008474	Trpt1	81	54.950	Cricetulus_griseus_chok1gshd
ENSGACG00000016927	trpt1	99	52.679	ENSCGRG00000009793	Trpt1	81	54.950	Cricetulus_griseus_crigri
ENSGACG00000016927	trpt1	95	76.879	ENSCSEG00000005840	trpt1	87	77.228	Cynoglossus_semilaevis
ENSGACG00000016927	trpt1	97	75.141	ENSCVAG00000006318	trpt1	93	76.119	Cyprinodon_variegatus
ENSGACG00000016927	trpt1	98	66.480	ENSDARG00000037628	trpt1	87	70.408	Danio_rerio
ENSGACG00000016927	trpt1	93	48.095	ENSDNOG00000044923	TRPT1	69	48.969	Dasypus_novemcinctus
ENSGACG00000016927	trpt1	100	52.212	ENSDORG00000001624	Trpt1	82	54.950	Dipodomys_ordii
ENSGACG00000016927	trpt1	93	38.953	FBgn0053057	CG33057	90	39.691	Drosophila_melanogaster
ENSGACG00000016927	trpt1	96	51.364	ENSEBUG00000012569	-	90	53.529	Eptatretus_burgeri
ENSGACG00000016927	trpt1	100	54.978	ENSEASG00005019983	TRPT1	79	57.426	Equus_asinus_asinus
ENSGACG00000016927	trpt1	100	53.680	ENSECAG00000009917	TRPT1	88	56.061	Equus_caballus
ENSGACG00000016927	trpt1	95	56.744	ENSEEUG00000012739	TRPT1	80	57.921	Erinaceus_europaeus
ENSGACG00000016927	trpt1	95	75.000	ENSELUG00000007385	trpt1	87	74.000	Esox_lucius
ENSGACG00000016927	trpt1	100	54.348	ENSFCAG00000024621	TRPT1	86	55.367	Felis_catus
ENSGACG00000016927	trpt1	96	54.128	ENSFDAG00000002738	TRPT1	80	55.446	Fukomys_damarensis
ENSGACG00000016927	trpt1	95	80.814	ENSFHEG00000002434	trpt1	89	79.208	Fundulus_heteroclitus
ENSGACG00000016927	trpt1	92	74.405	ENSGMOG00000008716	trpt1	100	73.558	Gadus_morhua
ENSGACG00000016927	trpt1	94	51.462	ENSGALG00000050256	TRPT1	66	53.030	Gallus_gallus
ENSGACG00000016927	trpt1	97	78.531	ENSGAFG00000016762	trpt1	89	79.397	Gambusia_affinis
ENSGACG00000016927	trpt1	100	54.348	ENSGGOG00000012163	TRPT1	79	56.931	Gorilla_gorilla
ENSGACG00000016927	trpt1	95	81.977	ENSHBUG00000012772	trpt1	87	82.000	Haplochromis_burtoni
ENSGACG00000016927	trpt1	99	52.838	ENSHGLG00000013748	TRPT1	80	54.950	Heterocephalus_glaber_female
ENSGACG00000016927	trpt1	99	52.838	ENSHGLG00100013048	TRPT1	80	54.950	Heterocephalus_glaber_male
ENSGACG00000016927	trpt1	95	75.581	ENSHCOG00000000218	trpt1	87	75.500	Hippocampus_comes
ENSGACG00000016927	trpt1	96	64.943	ENSIPUG00000002573	trpt1	86	66.162	Ictalurus_punctatus
ENSGACG00000016927	trpt1	100	52.212	ENSSTOG00000014285	TRPT1	80	55.941	Ictidomys_tridecemlineatus
ENSGACG00000016927	trpt1	99	54.018	ENSJJAG00000010855	Trpt1	81	56.931	Jaculus_jaculus
ENSGACG00000016927	trpt1	95	79.651	ENSKMAG00000004214	trpt1	87	78.500	Kryptolebias_marmoratus
ENSGACG00000016927	trpt1	95	82.081	ENSLBEG00000005640	trpt1	88	83.168	Labrus_bergylta
ENSGACG00000016927	trpt1	96	59.195	ENSLACG00000016922	TRPT1	83	59.701	Latimeria_chalumnae
ENSGACG00000016927	trpt1	93	67.456	ENSLOCG00000001345	trpt1	80	68.020	Lepisosteus_oculatus
ENSGACG00000016927	trpt1	96	54.128	ENSLAFG00000009075	TRPT1	81	55.610	Loxodonta_africana
ENSGACG00000016927	trpt1	100	53.879	ENSMFAG00000036828	TRPT1	80	55.882	Macaca_fascicularis
ENSGACG00000016927	trpt1	100	54.348	ENSMMUG00000012940	TRPT1	79	56.436	Macaca_mulatta
ENSGACG00000016927	trpt1	100	53.879	ENSMNEG00000033348	TRPT1	80	55.882	Macaca_nemestrina
ENSGACG00000016927	trpt1	100	53.448	ENSMLEG00000031438	TRPT1	86	49.741	Mandrillus_leucophaeus
ENSGACG00000016927	trpt1	95	86.047	ENSMAMG00000021617	trpt1	87	85.000	Mastacembelus_armatus
ENSGACG00000016927	trpt1	95	81.977	ENSMZEG00005004773	trpt1	87	82.000	Maylandia_zebra
ENSGACG00000016927	trpt1	90	53.939	ENSMAUG00000014107	Trpt1	80	53.892	Mesocricetus_auratus
ENSGACG00000016927	trpt1	96	54.587	ENSMICG00000016950	TRPT1	88	47.208	Microcebus_murinus
ENSGACG00000016927	trpt1	99	54.018	ENSMOCG00000021342	Trpt1	81	56.436	Microtus_ochrogaster
ENSGACG00000016927	trpt1	95	82.659	ENSMMOG00000002896	trpt1	87	82.178	Mola_mola
ENSGACG00000016927	trpt1	94	56.808	ENSMODG00000010226	TRPT1	90	57.789	Monodelphis_domestica
ENSGACG00000016927	trpt1	95	85.465	ENSMALG00000012208	trpt1	81	84.500	Monopterus_albus
ENSGACG00000016927	trpt1	99	53.125	MGP_CAROLIEiJ_G0022627	Trpt1	81	55.446	Mus_caroli
ENSGACG00000016927	trpt1	99	53.125	ENSMUSG00000047656	Trpt1	81	55.446	Mus_musculus
ENSGACG00000016927	trpt1	97	53.636	MGP_PahariEiJ_G0014121	Trpt1	81	55.446	Mus_pahari
ENSGACG00000016927	trpt1	99	53.571	MGP_SPRETEiJ_G0023537	Trpt1	81	55.941	Mus_spretus
ENSGACG00000016927	trpt1	100	53.448	ENSMPUG00000013272	TRPT1	73	56.436	Mustela_putorius_furo
ENSGACG00000016927	trpt1	94	55.556	ENSMLUG00000024858	TRPT1	80	56.931	Myotis_lucifugus
ENSGACG00000016927	trpt1	95	52.326	ENSNGAG00000007665	Trpt1	86	52.542	Nannospalax_galili
ENSGACG00000016927	trpt1	95	76.471	ENSNBRG00000001528	trpt1	88	77.209	Neolamprologus_brichardi
ENSGACG00000016927	trpt1	96	44.000	ENSNLEG00000033525	-	86	44.382	Nomascus_leucogenys
ENSGACG00000016927	trpt1	95	56.395	ENSMEUG00000000943	TRPT1	78	59.391	Notamacropus_eugenii
ENSGACG00000016927	trpt1	99	54.585	ENSOPRG00000015917	TRPT1	81	56.931	Ochotona_princeps
ENSGACG00000016927	trpt1	95	54.913	ENSODEG00000015724	TRPT1	81	55.665	Octodon_degus
ENSGACG00000016927	trpt1	95	80.814	ENSONIG00000005333	trpt1	87	80.500	Oreochromis_niloticus
ENSGACG00000016927	trpt1	89	51.961	ENSOANG00000010375	TRPT1	89	51.961	Ornithorhynchus_anatinus
ENSGACG00000016927	trpt1	98	53.304	ENSOCUG00000022244	TRPT1	80	55.941	Oryctolagus_cuniculus
ENSGACG00000016927	trpt1	96	76.000	ENSORLG00000025159	trpt1	90	76.500	Oryzias_latipes
ENSGACG00000016927	trpt1	96	75.429	ENSORLG00020018944	trpt1	89	75.500	Oryzias_latipes_hni
ENSGACG00000016927	trpt1	96	76.000	ENSORLG00015017108	trpt1	77	76.301	Oryzias_latipes_hsok
ENSGACG00000016927	trpt1	95	77.326	ENSOMEG00000018645	trpt1	89	76.500	Oryzias_melastigma
ENSGACG00000016927	trpt1	95	53.757	ENSOGAG00000007134	TRPT1	80	55.172	Otolemur_garnettii
ENSGACG00000016927	trpt1	100	53.043	ENSOARG00000004961	TRPT1	79	56.436	Ovis_aries
ENSGACG00000016927	trpt1	95	55.233	ENSPPAG00000027600	TRPT1	86	55.367	Pan_paniscus
ENSGACG00000016927	trpt1	95	55.814	ENSPPRG00000022870	TRPT1	95	50.510	Panthera_pardus
ENSGACG00000016927	trpt1	94	55.556	ENSPTIG00000018872	TRPT1	84	55.491	Panthera_tigris_altaica
ENSGACG00000016927	trpt1	95	55.233	ENSPTRG00000003822	TRPT1	86	55.367	Pan_troglodytes
ENSGACG00000016927	trpt1	100	53.448	ENSPANG00000011001	TRPT1	80	55.392	Papio_anubis
ENSGACG00000016927	trpt1	95	65.896	ENSPKIG00000008323	trpt1	87	68.159	Paramormyrops_kingsleyae
ENSGACG00000016927	trpt1	99	54.260	ENSPSIG00000009910	TRPT1	85	56.436	Pelodiscus_sinensis
ENSGACG00000016927	trpt1	96	76.571	ENSPMGG00000005037	trpt1	89	77.000	Periophthalmus_magnuspinnatus
ENSGACG00000016927	trpt1	99	51.339	ENSPEMG00000013720	Trpt1	81	53.960	Peromyscus_maniculatus_bairdii
ENSGACG00000016927	trpt1	94	53.216	ENSPMAG00000001449	trpt1	95	56.281	Petromyzon_marinus
ENSGACG00000016927	trpt1	94	56.725	ENSPCIG00000008060	TRPT1	81	58.911	Phascolarctos_cinereus
ENSGACG00000016927	trpt1	97	79.661	ENSPFOG00000009475	trpt1	88	80.000	Poecilia_formosa
ENSGACG00000016927	trpt1	55	63.107	ENSPLAG00000023925	-	72	63.107	Poecilia_latipinna
ENSGACG00000016927	trpt1	97	79.661	ENSPMEG00000003682	trpt1	88	80.000	Poecilia_mexicana
ENSGACG00000016927	trpt1	97	80.226	ENSPREG00000015408	trpt1	88	80.500	Poecilia_reticulata
ENSGACG00000016927	trpt1	95	55.814	ENSPPYG00000003116	TRPT1	79	57.426	Pongo_abelii
ENSGACG00000016927	trpt1	95	55.233	ENSPCAG00000000762	TRPT1	80	56.436	Procavia_capensis
ENSGACG00000016927	trpt1	96	54.128	ENSPCOG00000010370	TRPT1	88	47.739	Propithecus_coquereli
ENSGACG00000016927	trpt1	95	75.401	ENSPNYG00000014805	trpt1	88	75.814	Pundamilia_nyererei
ENSGACG00000016927	trpt1	96	67.241	ENSPNAG00000008548	trpt1	87	69.543	Pygocentrus_nattereri
ENSGACG00000016927	trpt1	99	52.232	ENSRNOG00000023023	Trpt1	81	54.455	Rattus_norvegicus
ENSGACG00000016927	trpt1	100	53.478	ENSRBIG00000040432	TRPT1	79	55.941	Rhinopithecus_bieti
ENSGACG00000016927	trpt1	100	54.348	ENSRROG00000044905	TRPT1	79	56.931	Rhinopithecus_roxellana
ENSGACG00000016927	trpt1	84	33.962	YOL102C	TPT1	83	35.938	Saccharomyces_cerevisiae
ENSGACG00000016927	trpt1	100	54.348	ENSSBOG00000021466	TRPT1	87	48.980	Saimiri_boliviensis_boliviensis
ENSGACG00000016927	trpt1	96	67.816	ENSSFOG00015005844	trpt1	89	67.662	Scleropages_formosus
ENSGACG00000016927	trpt1	96	78.286	ENSSMAG00000017744	trpt1	88	79.500	Scophthalmus_maximus
ENSGACG00000016927	trpt1	95	83.721	ENSSDUG00000017106	trpt1	88	83.500	Seriola_dumerili
ENSGACG00000016927	trpt1	95	82.659	ENSSLDG00000015957	trpt1	82	84.737	Seriola_lalandi_dorsalis
ENSGACG00000016927	trpt1	95	83.815	ENSSPAG00000007557	trpt1	71	84.000	Stegastes_partitus
ENSGACG00000016927	trpt1	96	56.019	ENSSSCG00000013040	TRPT1	77	57.426	Sus_scrofa
ENSGACG00000016927	trpt1	96	80.571	ENSTRUG00000023723	trpt1	87	80.000	Takifugu_rubripes
ENSGACG00000016927	trpt1	95	80.233	ENSTNIG00000003381	trpt1	87	82.000	Tetraodon_nigroviridis
ENSGACG00000016927	trpt1	98	51.770	ENSTBEG00000006023	TRPT1	79	54.500	Tupaia_belangeri
ENSGACG00000016927	trpt1	96	53.670	ENSTTRG00000010252	TRPT1	79	55.446	Tursiops_truncatus
ENSGACG00000016927	trpt1	96	55.046	ENSUAMG00000015208	TRPT1	79	56.436	Ursus_americanus
ENSGACG00000016927	trpt1	96	55.046	ENSUMAG00000001410	TRPT1	79	56.436	Ursus_maritimus
ENSGACG00000016927	trpt1	99	53.275	ENSVVUG00000029774	TRPT1	83	55.941	Vulpes_vulpes
ENSGACG00000016927	trpt1	94	58.721	ENSXETG00000007196	trpt1	86	60.000	Xenopus_tropicalis
ENSGACG00000016927	trpt1	95	79.769	ENSXCOG00000001614	trpt1	87	79.798	Xiphophorus_couchianus
ENSGACG00000016927	trpt1	97	81.356	ENSXMAG00000003142	trpt1	90	81.500	Xiphophorus_maculatus