EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017002 (Gene tree)
Gene ID: -
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B%2C a
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 10150 bases
Position: chrgroupXIV:6610923-6621072
Accession: ZDB-GENE-050309-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022456	RRM_1	PF00076.22	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022498	-	4974	-	ENSGACP00000022456	1657 (aa)	-	G3PXW7

Gene Model

Click here to download ENSGACG00000017002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017002	setd1ba	89	78.090	ENSACIG00000016453	setd1ba	81	78.090	Amphilophus_citrinellus
ENSGACG00000017002	setd1ba	85	90.000	ENSATEG00000021563	setd1ba	88	90.000	Anabas_testudineus
ENSGACG00000017002	setd1ba	91	55.524	ENSAPLG00000005217	SETD1B	80	57.928	Anas_platyrhynchos
ENSGACG00000017002	setd1ba	80	74.096	ENSAMXG00000020648	setd1ba	77	68.889	Astyanax_mexicanus
ENSGACG00000017002	setd1ba	51	75.275	ENSCAFG00000008167	SETD1B	66	73.995	Canis_familiaris
ENSGACG00000017002	setd1ba	50	71.951	ENSCHIG00000013406	SETD1B	81	60.622	Capra_hircus
ENSGACG00000017002	setd1ba	56	68.874	ENSCHIG00000025896	SETD1A	55	68.932	Capra_hircus
ENSGACG00000017002	setd1ba	54	66.438	ENSTSYG00000033777	SETD1B	58	66.438	Carlito_syrichta
ENSGACG00000017002	setd1ba	50	80.982	ENSCCAG00000031928	SETD1B	63	81.115	Cebus_capucinus
ENSGACG00000017002	setd1ba	58	69.360	ENSCCAG00000025600	SETD1A	55	69.256	Cebus_capucinus
ENSGACG00000017002	setd1ba	61	80.982	ENSCATG00000035803	SETD1B	60	81.115	Cercocebus_atys
ENSGACG00000017002	setd1ba	54	80.368	ENSCLAG00000013200	SETD1B	77	67.883	Chinchilla_lanigera
ENSGACG00000017002	setd1ba	62	68.874	ENSCSAG00000005791	SETD1A	55	68.810	Chlorocebus_sabaeus
ENSGACG00000017002	setd1ba	88	67.708	ENSCPBG00000026067	SETD1B	74	66.038	Chrysemys_picta_bellii
ENSGACG00000017002	setd1ba	56	72.358	ENSCANG00000023445	SETD1B	55	72.358	Colobus_angolensis_palliatus
ENSGACG00000017002	setd1ba	95	76.602	ENSCSEG00000001458	setd1ba	56	76.304	Cynoglossus_semilaevis
ENSGACG00000017002	setd1ba	95	61.864	ENSDARG00000060847	setd1ba	86	61.299	Danio_rerio
ENSGACG00000017002	setd1ba	56	71.341	ENSDNOG00000035084	SETD1B	80	54.828	Dasypus_novemcinctus
ENSGACG00000017002	setd1ba	66	81.231	ENSEASG00005012369	SETD1B	61	81.231	Equus_asinus_asinus
ENSGACG00000017002	setd1ba	51	65.862	ENSGMOG00000015906	-	51	63.758	Gadus_morhua
ENSGACG00000017002	setd1ba	59	89.841	ENSGMOG00000009831	setd1ba	59	89.841	Gadus_morhua
ENSGACG00000017002	setd1ba	53	66.667	ENSGALG00000004324	SETD1B	80	58.294	Gallus_gallus
ENSGACG00000017002	setd1ba	88	67.361	ENSGAGG00000025013	SETD1B	84	57.143	Gopherus_agassizii
ENSGACG00000017002	setd1ba	63	80.243	ENSHGLG00000012063	SETD1B	76	73.458	Heterocephalus_glaber_female
ENSGACG00000017002	setd1ba	94	75.851	ENSHCOG00000001951	setd1ba	87	75.851	Hippocampus_comes
ENSGACG00000017002	setd1ba	62	80.982	ENSSTOG00000012430	SETD1B	67	81.115	Ictidomys_tridecemlineatus
ENSGACG00000017002	setd1ba	95	76.155	ENSKMAG00000007804	setd1ba	87	76.155	Kryptolebias_marmoratus
ENSGACG00000017002	setd1ba	56	64.338	ENSLBEG00000020113	setd1ba	87	76.805	Labrus_bergylta
ENSGACG00000017002	setd1ba	89	65.827	ENSLACG00000018379	SETD1B	86	54.201	Latimeria_chalumnae
ENSGACG00000017002	setd1ba	68	70.909	ENSLOCG00000005190	setd1ba	89	59.030	Lepisosteus_oculatus
ENSGACG00000017002	setd1ba	72	66.423	ENSLAFG00000026518	SETD1B	64	66.423	Loxodonta_africana
ENSGACG00000017002	setd1ba	61	80.982	ENSMNEG00000014228	SETD1B	66	66.438	Macaca_nemestrina
ENSGACG00000017002	setd1ba	51	80.982	ENSMLEG00000039573	SETD1B	63	66.438	Mandrillus_leucophaeus
ENSGACG00000017002	setd1ba	53	66.667	ENSMGAG00000004421	SETD1B	76	75.616	Meleagris_gallopavo
ENSGACG00000017002	setd1ba	53	74.863	ENSMICG00000001152	SETD1B	66	73.545	Microcebus_murinus
ENSGACG00000017002	setd1ba	70	73.826	ENSMODG00000023734	SETD1B	75	53.378	Monodelphis_domestica
ENSGACG00000017002	setd1ba	62	80.186	ENSODEG00000010155	SETD1B	55	80.186	Octodon_degus
ENSGACG00000017002	setd1ba	50	80.000	ENSOCUG00000017708	SETD1B	69	80.805	Oryctolagus_cuniculus
ENSGACG00000017002	setd1ba	57	71.784	ENSORLG00000008435	setd1ba	90	71.637	Oryzias_latipes
ENSGACG00000017002	setd1ba	91	72.368	ENSORLG00020017079	setd1ba	89	72.117	Oryzias_latipes_hni
ENSGACG00000017002	setd1ba	71	69.466	ENSPPRG00000021041	SETD1B	64	69.466	Panthera_pardus
ENSGACG00000017002	setd1ba	89	63.483	ENSPKIG00000023115	setd1ba	76	63.483	Paramormyrops_kingsleyae
ENSGACG00000017002	setd1ba	82	81.457	ENSPFOG00000019768	setd1ba	83	75.982	Poecilia_formosa
ENSGACG00000017002	setd1ba	56	77.054	ENSPLAG00000023459	setd1ba	53	77.054	Poecilia_latipinna
ENSGACG00000017002	setd1ba	57	76.061	ENSPMEG00000020446	setd1ba	54	76.061	Poecilia_mexicana
ENSGACG00000017002	setd1ba	57	76.364	ENSPREG00000011589	setd1ba	54	76.364	Poecilia_reticulata
ENSGACG00000017002	setd1ba	83	72.571	ENSPNAG00000016011	setd1ba	75	72.571	Pygocentrus_nattereri
ENSGACG00000017002	setd1ba	61	80.982	ENSRBIG00000034516	SETD1B	68	66.438	Rhinopithecus_bieti
ENSGACG00000017002	setd1ba	61	80.982	ENSSBOG00000033322	SETD1B	61	81.115	Saimiri_boliviensis_boliviensis
ENSGACG00000017002	setd1ba	61	73.171	ENSSFOG00015004814	SETD1B	85	73.171	Scleropages_formosus
ENSGACG00000017002	setd1ba	84	82.635	ENSSLDG00000015543	setd1ba	87	78.537	Seriola_lalandi_dorsalis
ENSGACG00000017002	setd1ba	57	66.438	ENSSSCG00000009806	SETD1B	85	60.171	Sus_scrofa
ENSGACG00000017002	setd1ba	57	61.765	ENSTRUG00000009533	setd1ba	86	80.814	Takifugu_rubripes
ENSGACG00000017002	setd1ba	89	76.136	ENSTNIG00000009090	setd1ba	86	75.220	Tetraodon_nigroviridis
ENSGACG00000017002	setd1ba	64	80.923	ENSUAMG00000008729	SETD1B	66	71.774	Ursus_americanus
ENSGACG00000017002	setd1ba	74	81.905	ENSXETG00000003760	setd1b	70	83.819	Xenopus_tropicalis