EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000017006 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-107m4.1
Alias: -
Full Name: si:ch211-107m4.1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3642 bases
Position: chrgroupIV:5341427-5345068
Accession: ZDB-GENE-081107-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022460	SAP	PF02037.27	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022502	-	1884	-	ENSGACP00000022460	628 (aa)	-	G3PXX1

Gene Model

Click here to download ENSGACG00000017006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000017006	si:ch211-107m4.1	80	44.615	ENSGACG00000004679	hnrnpub	53	36.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSG00000214753	HNRNPUL2	58	42.630	Homo_sapiens
ENSGACG00000017006	si:ch211-107m4.1	99	60.964	ENSAPOG00000005128	si:ch211-107m4.1	93	59.476	Acanthochromis_polyacanthus
ENSGACG00000017006	si:ch211-107m4.1	87	73.086	ENSACIG00000022729	si:ch211-107m4.1	84	73.086	Amphilophus_citrinellus
ENSGACG00000017006	si:ch211-107m4.1	99	58.879	ENSAOCG00000017297	si:ch211-107m4.1	89	58.114	Amphiprion_ocellaris
ENSGACG00000017006	si:ch211-107m4.1	99	58.567	ENSAPEG00000009122	-	89	57.805	Amphiprion_percula
ENSGACG00000017006	si:ch211-107m4.1	64	43.069	ENSACAG00000000746	-	78	36.431	Anolis_carolinensis
ENSGACG00000017006	si:ch211-107m4.1	64	44.110	ENSANAG00000027153	-	87	36.850	Aotus_nancymaae
ENSGACG00000017006	si:ch211-107m4.1	99	60.061	ENSACLG00000018069	si:ch211-107m4.1	91	72.482	Astatotilapia_calliptera
ENSGACG00000017006	si:ch211-107m4.1	77	64.286	ENSAMXG00000033712	si:ch211-107m4.1	67	64.286	Astyanax_mexicanus
ENSGACG00000017006	si:ch211-107m4.1	64	43.609	ENSBTAG00000002510	HNRNPUL2	58	42.177	Bos_taurus
ENSGACG00000017006	si:ch211-107m4.1	64	44.110	ENSCJAG00000018709	-	58	42.630	Callithrix_jacchus
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSCAFG00000015686	-	87	36.489	Canis_familiaris
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSCAFG00020013120	-	87	36.489	Canis_lupus_dingo
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSCHIG00000020213	-	58	42.404	Capra_hircus
ENSGACG00000017006	si:ch211-107m4.1	64	40.852	ENSCCAG00000037674	-	57	39.683	Cebus_capucinus
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSCATG00000034588	-	58	42.630	Cercocebus_atys
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSCSAG00000006701	-	83	36.850	Chlorocebus_sabaeus
ENSGACG00000017006	si:ch211-107m4.1	99	56.786	ENSCSEG00000005686	si:ch211-107m4.1	93	57.609	Cynoglossus_semilaevis
ENSGACG00000017006	si:ch211-107m4.1	99	55.573	ENSCVAG00000006862	si:ch211-107m4.1	91	56.502	Cyprinodon_variegatus
ENSGACG00000017006	si:ch211-107m4.1	77	51.970	ENSDARG00000056830	si:ch211-107m4.1	66	65.000	Danio_rerio
ENSGACG00000017006	si:ch211-107m4.1	64	43.609	ENSDNOG00000006508	-	58	42.177	Dasypus_novemcinctus
ENSGACG00000017006	si:ch211-107m4.1	64	43.424	ENSDORG00000008678	Hnrnpul2	58	42.022	Dipodomys_ordii
ENSGACG00000017006	si:ch211-107m4.1	64	44.110	ENSEASG00005011347	-	58	42.630	Equus_asinus_asinus
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSECAG00000020298	-	58	42.404	Equus_caballus
ENSGACG00000017006	si:ch211-107m4.1	77	67.442	ENSELUG00000008134	si:ch211-107m4.1	89	50.123	Esox_lucius
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSFCAG00000014766	-	87	36.336	Felis_catus
ENSGACG00000017006	si:ch211-107m4.1	99	59.565	ENSFHEG00000014731	si:ch211-107m4.1	93	60.342	Fundulus_heteroclitus
ENSGACG00000017006	si:ch211-107m4.1	99	57.453	ENSGAFG00000016579	si:ch211-107m4.1	87	67.892	Gambusia_affinis
ENSGACG00000017006	si:ch211-107m4.1	68	45.116	ENSGAGG00000016818	-	81	37.596	Gopherus_agassizii
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSGGOG00000011722	HNRNPUL2	58	42.630	Gorilla_gorilla
ENSGACG00000017006	si:ch211-107m4.1	99	59.598	ENSHBUG00000013076	si:ch211-107m4.1	94	59.409	Haplochromis_burtoni
ENSGACG00000017006	si:ch211-107m4.1	68	42.558	ENSHGLG00000003285	-	86	35.714	Heterocephalus_glaber_female
ENSGACG00000017006	si:ch211-107m4.1	99	42.154	ENSIPUG00000009518	si:ch211-107m4.1	67	63.415	Ictalurus_punctatus
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSJJAG00000011206	Hnrnpul2	58	42.404	Jaculus_jaculus
ENSGACG00000017006	si:ch211-107m4.1	99	59.055	ENSKMAG00000003651	si:ch211-107m4.1	91	58.359	Kryptolebias_marmoratus
ENSGACG00000017006	si:ch211-107m4.1	79	44.138	ENSLACG00000009304	-	67	43.750	Latimeria_chalumnae
ENSGACG00000017006	si:ch211-107m4.1	64	44.110	ENSLAFG00000005377	-	58	42.857	Loxodonta_africana
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSMFAG00000041014	-	58	42.630	Macaca_fascicularis
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSMNEG00000036955	-	58	42.630	Macaca_nemestrina
ENSGACG00000017006	si:ch211-107m4.1	99	57.781	ENSMAMG00000021489	si:ch211-107m4.1	89	58.372	Mastacembelus_armatus
ENSGACG00000017006	si:ch211-107m4.1	99	60.061	ENSMZEG00005005136	si:ch211-107m4.1	91	72.482	Maylandia_zebra
ENSGACG00000017006	si:ch211-107m4.1	50	42.723	ENSMOCG00000020000	Hnrnpul2	53	41.803	Microtus_ochrogaster
ENSGACG00000017006	si:ch211-107m4.1	77	74.827	ENSMALG00000011564	si:ch211-107m4.1	81	75.971	Monopterus_albus
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	MGP_CAROLIEiJ_G0022656	Hnrnpul2	58	42.404	Mus_caroli
ENSGACG00000017006	si:ch211-107m4.1	64	44.110	ENSMUSG00000071659	Hnrnpul2	58	42.630	Mus_musculus
ENSGACG00000017006	si:ch211-107m4.1	64	44.110	MGP_PahariEiJ_G0014151	Hnrnpul2	87	35.897	Mus_pahari
ENSGACG00000017006	si:ch211-107m4.1	64	44.110	MGP_SPRETEiJ_G0023569	Hnrnpul2	58	42.630	Mus_spretus
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSMPUG00000013707	-	86	36.641	Mustela_putorius_furo
ENSGACG00000017006	si:ch211-107m4.1	68	44.419	ENSMLUG00000000412	-	57	43.311	Myotis_lucifugus
ENSGACG00000017006	si:ch211-107m4.1	90	69.406	ENSNBRG00000000429	si:ch211-107m4.1	84	72.973	Neolamprologus_brichardi
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSNLEG00000004077	-	58	42.630	Nomascus_leucogenys
ENSGACG00000017006	si:ch211-107m4.1	99	59.385	ENSONIG00000005422	si:ch211-107m4.1	94	59.351	Oreochromis_niloticus
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSOCUG00000009474	-	87	36.544	Oryctolagus_cuniculus
ENSGACG00000017006	si:ch211-107m4.1	98	67.043	ENSORLG00000024574	si:ch211-107m4.1	96	55.093	Oryzias_latipes
ENSGACG00000017006	si:ch211-107m4.1	99	53.858	ENSOMEG00000018153	si:ch211-107m4.1	91	54.531	Oryzias_melastigma
ENSGACG00000017006	si:ch211-107m4.1	64	44.000	ENSOGAG00000003302	-	94	36.662	Otolemur_garnettii
ENSGACG00000017006	si:ch211-107m4.1	68	43.721	ENSOARG00000016817	-	58	42.630	Ovis_aries
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSPPRG00000006380	-	87	36.336	Panthera_pardus
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSPTRG00000034359	HNRNPUL2	58	42.630	Pan_troglodytes
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSPANG00000023745	-	98	36.722	Papio_anubis
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSPEMG00000015546	Hnrnpul2	58	42.404	Peromyscus_maniculatus_bairdii
ENSGACG00000017006	si:ch211-107m4.1	97	57.166	ENSPFOG00000008050	si:ch211-107m4.1	100	57.643	Poecilia_formosa
ENSGACG00000017006	si:ch211-107m4.1	99	56.677	ENSPLAG00000003485	si:ch211-107m4.1	90	56.832	Poecilia_latipinna
ENSGACG00000017006	si:ch211-107m4.1	99	57.453	ENSPMEG00000005490	si:ch211-107m4.1	83	65.594	Poecilia_mexicana
ENSGACG00000017006	si:ch211-107m4.1	90	65.617	ENSPREG00000014973	si:ch211-107m4.1	90	57.342	Poecilia_reticulata
ENSGACG00000017006	si:ch211-107m4.1	68	43.619	ENSPCAG00000010016	-	58	42.760	Procavia_capensis
ENSGACG00000017006	si:ch211-107m4.1	64	43.860	ENSRNOG00000019507	Hnrnpul2	58	42.404	Rattus_norvegicus
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSRBIG00000037820	-	87	36.874	Rhinopithecus_bieti
ENSGACG00000017006	si:ch211-107m4.1	68	43.488	ENSRROG00000036561	-	87	36.874	Rhinopithecus_roxellana
ENSGACG00000017006	si:ch211-107m4.1	83	52.273	ENSSFOG00015006544	si:ch211-107m4.1	63	52.212	Scleropages_formosus
ENSGACG00000017006	si:ch211-107m4.1	99	61.260	ENSSMAG00000017226	si:ch211-107m4.1	93	62.187	Scophthalmus_maximus
ENSGACG00000017006	si:ch211-107m4.1	99	59.271	ENSSPAG00000006972	si:ch211-107m4.1	91	59.125	Stegastes_partitus
ENSGACG00000017006	si:ch211-107m4.1	63	43.687	ENSSSCG00000028542	-	84	37.094	Sus_scrofa
ENSGACG00000017006	si:ch211-107m4.1	87	67.892	ENSTRUG00000012843	si:ch211-107m4.1	90	67.892	Takifugu_rubripes
ENSGACG00000017006	si:ch211-107m4.1	86	67.939	ENSTNIG00000000741	si:ch211-107m4.1	97	67.939	Tetraodon_nigroviridis
ENSGACG00000017006	si:ch211-107m4.1	68	43.256	ENSUAMG00000025971	-	87	36.336	Ursus_americanus
ENSGACG00000017006	si:ch211-107m4.1	68	43.721	ENSVVUG00000029847	-	87	36.489	Vulpes_vulpes
ENSGACG00000017006	si:ch211-107m4.1	70	41.309	ENSXETG00000006015	hnrnpul2	85	35.604	Xenopus_tropicalis
ENSGACG00000017006	si:ch211-107m4.1	99	57.764	ENSXMAG00000003224	si:ch211-107m4.1	89	69.136	Xiphophorus_maculatus