EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017182 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 28553 bases
Position: chrgroupII:21257947-21286499
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022712	CPSF_A	PF03178.15	3.5e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022755	-	3329	-	ENSGACP00000022712	1091 (aa)	-	G3PYM2

Gene Model

Click here to download ENSGACG00000017182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017182's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017182	ddb1	100	90.559	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSGACG00000017182	ddb1	100	97.434	ENSAPOG00000005036	ddb1	99	98.571	Acanthochromis_polyacanthus
ENSGACG00000017182	ddb1	100	90.651	ENSAMEG00000016518	DDB1	96	90.651	Ailuropoda_melanoleuca
ENSGACG00000017182	ddb1	90	98.265	ENSACIG00000020624	ddb1	99	98.265	Amphilophus_citrinellus
ENSGACG00000017182	ddb1	100	97.342	ENSAOCG00000003066	ddb1	96	97.342	Amphiprion_ocellaris
ENSGACG00000017182	ddb1	100	97.342	ENSAPEG00000000092	ddb1	99	98.505	Amphiprion_percula
ENSGACG00000017182	ddb1	98	99.065	ENSATEG00000020571	ddb1	97	99.065	Anabas_testudineus
ENSGACG00000017182	ddb1	99	88.622	ENSAPLG00000007174	DDB1	95	88.622	Anas_platyrhynchos
ENSGACG00000017182	ddb1	100	89.826	ENSACAG00000017758	DDB1	96	89.826	Anolis_carolinensis
ENSGACG00000017182	ddb1	100	90.559	ENSANAG00000021878	DDB1	96	90.559	Aotus_nancymaae
ENSGACG00000017182	ddb1	100	97.159	ENSACLG00000012401	ddb1	99	97.763	Astatotilapia_calliptera
ENSGACG00000017182	ddb1	100	90.559	ENSBTAG00000021569	DDB1	89	90.559	Bos_taurus
ENSGACG00000017182	ddb1	100	36.786	WBGene00010890	ddb-1	96	36.786	Caenorhabditis_elegans
ENSGACG00000017182	ddb1	100	90.559	ENSCJAG00000019319	DDB1	96	90.559	Callithrix_jacchus
ENSGACG00000017182	ddb1	100	90.651	ENSCAFG00000016264	DDB1	99	91.589	Canis_familiaris
ENSGACG00000017182	ddb1	98	91.589	ENSCAFG00020012722	DDB1	99	91.589	Canis_lupus_dingo
ENSGACG00000017182	ddb1	100	90.559	ENSCHIG00000014969	DDB1	96	90.559	Capra_hircus
ENSGACG00000017182	ddb1	100	90.192	ENSTSYG00000008027	DDB1	96	90.192	Carlito_syrichta
ENSGACG00000017182	ddb1	98	90.187	ENSCAPG00000010786	DDB1	96	90.187	Cavia_aperea
ENSGACG00000017182	ddb1	100	90.284	ENSCPOG00000009956	DDB1	96	90.284	Cavia_porcellus
ENSGACG00000017182	ddb1	100	90.559	ENSCCAG00000035883	DDB1	96	90.559	Cebus_capucinus
ENSGACG00000017182	ddb1	100	88.214	ENSCATG00000044495	DDB1	96	88.214	Cercocebus_atys
ENSGACG00000017182	ddb1	100	90.376	ENSCLAG00000004126	DDB1	96	90.376	Chinchilla_lanigera
ENSGACG00000017182	ddb1	100	90.559	ENSCSAG00000006392	DDB1	96	90.559	Chlorocebus_sabaeus
ENSGACG00000017182	ddb1	89	82.806	ENSCHOG00000011377	DDB1	88	82.806	Choloepus_hoffmanni
ENSGACG00000017182	ddb1	100	90.101	ENSCPBG00000017728	DDB1	96	90.101	Chrysemys_picta_bellii
ENSGACG00000017182	ddb1	100	60.562	ENSCING00000007437	-	96	60.562	Ciona_intestinalis
ENSGACG00000017182	ddb1	93	60.117	ENSCSAVG00000004783	-	100	60.048	Ciona_savignyi
ENSGACG00000017182	ddb1	100	90.559	ENSCANG00000019948	DDB1	96	90.559	Colobus_angolensis_palliatus
ENSGACG00000017182	ddb1	100	90.651	ENSCGRG00001016599	Ddb1	98	90.578	Cricetulus_griseus_chok1gshd
ENSGACG00000017182	ddb1	100	90.651	ENSCGRG00000013427	Ddb1	96	90.651	Cricetulus_griseus_crigri
ENSGACG00000017182	ddb1	97	98.115	ENSCSEG00000012499	ddb1	99	96.356	Cynoglossus_semilaevis
ENSGACG00000017182	ddb1	98	97.290	ENSCVAG00000019531	ddb1	99	97.290	Cyprinodon_variegatus
ENSGACG00000017182	ddb1	100	90.851	ENSDARG00000074431	ddb1	96	90.851	Danio_rerio
ENSGACG00000017182	ddb1	98	91.589	ENSDNOG00000014884	DDB1	97	91.589	Dasypus_novemcinctus
ENSGACG00000017182	ddb1	83	95.455	ENSDORG00000000127	Ddb1	95	95.455	Dipodomys_ordii
ENSGACG00000017182	ddb1	100	60.128	FBgn0260962	pic	96	60.128	Drosophila_melanogaster
ENSGACG00000017182	ddb1	70	95.276	ENSETEG00000001053	-	67	95.276	Echinops_telfairi
ENSGACG00000017182	ddb1	81	84.027	ENSEBUG00000014593	ddb1	97	84.027	Eptatretus_burgeri
ENSGACG00000017182	ddb1	100	90.651	ENSEASG00005008184	DDB1	96	90.651	Equus_asinus_asinus
ENSGACG00000017182	ddb1	100	90.651	ENSECAG00000012136	DDB1	96	90.651	Equus_caballus
ENSGACG00000017182	ddb1	89	87.542	ENSEEUG00000003194	DDB1	85	87.542	Erinaceus_europaeus
ENSGACG00000017182	ddb1	100	95.600	ENSELUG00000023868	ddb1	96	95.600	Esox_lucius
ENSGACG00000017182	ddb1	100	90.651	ENSFCAG00000029716	DDB1	96	90.651	Felis_catus
ENSGACG00000017182	ddb1	100	89.305	ENSFALG00000011981	DDB1	96	89.305	Ficedula_albicollis
ENSGACG00000017182	ddb1	100	90.376	ENSFDAG00000005128	DDB1	96	90.376	Fukomys_damarensis
ENSGACG00000017182	ddb1	90	96.000	ENSFHEG00000022133	ddb1	95	96.000	Fundulus_heteroclitus
ENSGACG00000017182	ddb1	82	98.662	ENSGMOG00000019386	ddb1	94	98.662	Gadus_morhua
ENSGACG00000017182	ddb1	100	90.009	ENSGALG00000042333	DDB1	96	90.009	Gallus_gallus
ENSGACG00000017182	ddb1	98	97.944	ENSGAFG00000013142	ddb1	99	97.944	Gambusia_affinis
ENSGACG00000017182	ddb1	95	89.855	ENSGAGG00000014124	DDB1	95	89.855	Gopherus_agassizii
ENSGACG00000017182	ddb1	100	90.559	ENSGGOG00000004052	DDB1	96	90.559	Gorilla_gorilla
ENSGACG00000017182	ddb1	100	97.159	ENSHBUG00000008873	ddb1	96	97.159	Haplochromis_burtoni
ENSGACG00000017182	ddb1	100	90.376	ENSHGLG00000018430	DDB1	96	90.376	Heterocephalus_glaber_female
ENSGACG00000017182	ddb1	100	89.368	ENSHGLG00100014475	DDB1	96	89.368	Heterocephalus_glaber_male
ENSGACG00000017182	ddb1	98	98.037	ENSHCOG00000018670	ddb1	98	98.037	Hippocampus_comes
ENSGACG00000017182	ddb1	100	94.317	ENSIPUG00000005612	DDB1	97	95.421	Ictalurus_punctatus
ENSGACG00000017182	ddb1	100	90.559	ENSSTOG00000007552	DDB1	96	90.559	Ictidomys_tridecemlineatus
ENSGACG00000017182	ddb1	99	90.717	ENSJJAG00000017769	Ddb1	95	90.717	Jaculus_jaculus
ENSGACG00000017182	ddb1	98	98.037	ENSKMAG00000002315	ddb1	99	98.037	Kryptolebias_marmoratus
ENSGACG00000017182	ddb1	88	99.063	ENSLBEG00000017065	ddb1	99	99.063	Labrus_bergylta
ENSGACG00000017182	ddb1	100	89.478	ENSLACG00000017611	DDB1	97	90.427	Latimeria_chalumnae
ENSGACG00000017182	ddb1	92	86.073	ENSLOCG00000000012	ddb1	95	86.073	Lepisosteus_oculatus
ENSGACG00000017182	ddb1	100	90.467	ENSLAFG00000011513	DDB1	96	90.467	Loxodonta_africana
ENSGACG00000017182	ddb1	100	90.559	ENSMFAG00000042035	DDB1	96	90.559	Macaca_fascicularis
ENSGACG00000017182	ddb1	100	90.559	ENSMMUG00000002691	DDB1	100	90.789	Macaca_mulatta
ENSGACG00000017182	ddb1	100	90.559	ENSMNEG00000031559	DDB1	96	90.559	Macaca_nemestrina
ENSGACG00000017182	ddb1	100	90.559	ENSMLEG00000044136	DDB1	98	89.926	Mandrillus_leucophaeus
ENSGACG00000017182	ddb1	100	97.800	ENSMAMG00000014372	ddb1	96	97.800	Mastacembelus_armatus
ENSGACG00000017182	ddb1	100	97.159	ENSMZEG00005013835	ddb1	96	97.159	Maylandia_zebra
ENSGACG00000017182	ddb1	94	89.171	ENSMGAG00000004990	DDB1	95	89.171	Meleagris_gallopavo
ENSGACG00000017182	ddb1	100	90.651	ENSMAUG00000012926	Ddb1	96	90.651	Mesocricetus_auratus
ENSGACG00000017182	ddb1	100	90.742	ENSMICG00000013703	DDB1	96	90.742	Microcebus_murinus
ENSGACG00000017182	ddb1	100	90.467	ENSMOCG00000020499	Ddb1	96	90.467	Microtus_ochrogaster
ENSGACG00000017182	ddb1	90	98.878	ENSMMOG00000001758	ddb1	99	98.878	Mola_mola
ENSGACG00000017182	ddb1	100	81.301	ENSMODG00000020353	DDB1	96	81.301	Monodelphis_domestica
ENSGACG00000017182	ddb1	100	97.525	ENSMALG00000014071	ddb1	96	97.525	Monopterus_albus
ENSGACG00000017182	ddb1	100	90.651	MGP_CAROLIEiJ_G0022695	Ddb1	96	90.651	Mus_caroli
ENSGACG00000017182	ddb1	100	90.742	ENSMUSG00000024740	Ddb1	96	90.742	Mus_musculus
ENSGACG00000017182	ddb1	100	90.651	MGP_PahariEiJ_G0014189	Ddb1	96	90.651	Mus_pahari
ENSGACG00000017182	ddb1	100	90.742	MGP_SPRETEiJ_G0023609	Ddb1	96	90.742	Mus_spretus
ENSGACG00000017182	ddb1	100	87.534	ENSMPUG00000014200	DDB1	96	87.534	Mustela_putorius_furo
ENSGACG00000017182	ddb1	100	90.559	ENSMLUG00000013232	DDB1	96	90.559	Myotis_lucifugus
ENSGACG00000017182	ddb1	100	90.559	ENSNGAG00000009384	Ddb1	96	90.559	Nannospalax_galili
ENSGACG00000017182	ddb1	100	97.250	ENSNBRG00000019581	ddb1	96	97.250	Neolamprologus_brichardi
ENSGACG00000017182	ddb1	100	87.670	ENSNLEG00000002022	DDB1	96	87.670	Nomascus_leucogenys
ENSGACG00000017182	ddb1	89	91.915	ENSMEUG00000001099	DDB1	88	91.915	Notamacropus_eugenii
ENSGACG00000017182	ddb1	90	81.568	ENSOPRG00000008254	DDB1	86	81.568	Ochotona_princeps
ENSGACG00000017182	ddb1	100	90.467	ENSODEG00000002419	DDB1	96	90.467	Octodon_degus
ENSGACG00000017182	ddb1	100	97.250	ENSONIG00000005804	ddb1	96	97.250	Oreochromis_niloticus
ENSGACG00000017182	ddb1	90	89.929	ENSOANG00000004897	DDB1	95	89.929	Ornithorhynchus_anatinus
ENSGACG00000017182	ddb1	100	90.559	ENSOCUG00000001667	DDB1	96	90.559	Oryctolagus_cuniculus
ENSGACG00000017182	ddb1	99	95.704	ENSORLG00000001399	ddb1	98	97.214	Oryzias_latipes
ENSGACG00000017182	ddb1	99	95.795	ENSORLG00020001277	ddb1	97	95.795	Oryzias_latipes_hni
ENSGACG00000017182	ddb1	98	97.290	ENSORLG00015002080	ddb1	98	97.290	Oryzias_latipes_hsok
ENSGACG00000017182	ddb1	98	97.570	ENSOMEG00000006181	ddb1	97	97.570	Oryzias_melastigma
ENSGACG00000017182	ddb1	100	90.742	ENSOGAG00000016103	DDB1	96	90.742	Otolemur_garnettii
ENSGACG00000017182	ddb1	100	90.559	ENSOARG00000011716	DDB1	95	90.559	Ovis_aries
ENSGACG00000017182	ddb1	100	90.559	ENSPPAG00000035343	DDB1	96	90.559	Pan_paniscus
ENSGACG00000017182	ddb1	100	90.651	ENSPPRG00000013300	DDB1	96	90.651	Panthera_pardus
ENSGACG00000017182	ddb1	98	90.561	ENSPTIG00000006909	DDB1	94	90.561	Panthera_tigris_altaica
ENSGACG00000017182	ddb1	100	90.559	ENSPTRG00000003737	DDB1	96	90.559	Pan_troglodytes
ENSGACG00000017182	ddb1	100	90.559	ENSPANG00000000242	DDB1	96	90.559	Papio_anubis
ENSGACG00000017182	ddb1	98	96.075	ENSPKIG00000019213	ddb1	94	96.075	Paramormyrops_kingsleyae
ENSGACG00000017182	ddb1	98	89.395	ENSPSIG00000013275	DDB1	96	89.395	Pelodiscus_sinensis
ENSGACG00000017182	ddb1	90	98.469	ENSPMGG00000021179	ddb1	99	98.469	Periophthalmus_magnuspinnatus
ENSGACG00000017182	ddb1	100	90.651	ENSPEMG00000012241	Ddb1	96	90.651	Peromyscus_maniculatus_bairdii
ENSGACG00000017182	ddb1	93	86.346	ENSPMAG00000008479	ddb1	100	86.346	Petromyzon_marinus
ENSGACG00000017182	ddb1	100	90.834	ENSPCIG00000002643	DDB1	96	90.834	Phascolarctos_cinereus
ENSGACG00000017182	ddb1	100	96.703	ENSPFOG00000002768	ddb1	96	96.703	Poecilia_formosa
ENSGACG00000017182	ddb1	100	96.700	ENSPLAG00000017227	ddb1	98	98.131	Poecilia_latipinna
ENSGACG00000017182	ddb1	100	96.700	ENSPMEG00000011398	ddb1	98	98.131	Poecilia_mexicana
ENSGACG00000017182	ddb1	98	98.131	ENSPREG00000004440	ddb1	97	98.131	Poecilia_reticulata
ENSGACG00000017182	ddb1	100	86.144	ENSPPYG00000003193	DDB1	96	86.144	Pongo_abelii
ENSGACG00000017182	ddb1	84	88.571	ENSPCAG00000011040	DDB1	80	88.571	Procavia_capensis
ENSGACG00000017182	ddb1	100	89.844	ENSPCOG00000015176	DDB1	96	89.844	Propithecus_coquereli
ENSGACG00000017182	ddb1	100	90.467	ENSPVAG00000003847	DDB1	96	90.467	Pteropus_vampyrus
ENSGACG00000017182	ddb1	98	96.168	ENSPNAG00000006635	ddb1	97	96.168	Pygocentrus_nattereri
ENSGACG00000017182	ddb1	100	90.742	ENSRNOG00000020715	Ddb1	96	90.742	Rattus_norvegicus
ENSGACG00000017182	ddb1	100	90.559	ENSRBIG00000033611	DDB1	96	90.559	Rhinopithecus_bieti
ENSGACG00000017182	ddb1	100	90.559	ENSRROG00000041407	DDB1	96	90.559	Rhinopithecus_roxellana
ENSGACG00000017182	ddb1	100	90.651	ENSSBOG00000019775	DDB1	96	90.651	Saimiri_boliviensis_boliviensis
ENSGACG00000017182	ddb1	94	88.247	ENSSHAG00000011600	DDB1	95	88.247	Sarcophilus_harrisii
ENSGACG00000017182	ddb1	98	96.262	ENSSFOG00015011151	ddb1	96	96.262	Scleropages_formosus
ENSGACG00000017182	ddb1	100	97.525	ENSSMAG00000009495	ddb1	96	97.525	Scophthalmus_maximus
ENSGACG00000017182	ddb1	100	97.800	ENSSDUG00000004642	ddb1	96	97.800	Seriola_dumerili
ENSGACG00000017182	ddb1	100	97.800	ENSSLDG00000015804	ddb1	96	97.800	Seriola_lalandi_dorsalis
ENSGACG00000017182	ddb1	72	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSGACG00000017182	ddb1	100	90.009	ENSSPUG00000019338	DDB1	96	90.009	Sphenodon_punctatus
ENSGACG00000017182	ddb1	98	98.785	ENSSPAG00000009888	ddb1	99	98.785	Stegastes_partitus
ENSGACG00000017182	ddb1	100	89.826	ENSSSCG00000013094	DDB1	96	89.826	Sus_scrofa
ENSGACG00000017182	ddb1	100	89.643	ENSTGUG00000006414	DDB1	96	89.643	Taeniopygia_guttata
ENSGACG00000017182	ddb1	98	97.196	ENSTRUG00000016682	ddb1	98	97.196	Takifugu_rubripes
ENSGACG00000017182	ddb1	87	90.556	ENSTNIG00000009565	ddb1	95	90.556	Tetraodon_nigroviridis
ENSGACG00000017182	ddb1	92	84.100	ENSTTRG00000011055	DDB1	90	84.100	Tursiops_truncatus
ENSGACG00000017182	ddb1	98	91.589	ENSUAMG00000017793	DDB1	93	91.589	Ursus_americanus
ENSGACG00000017182	ddb1	98	91.589	ENSUMAG00000011788	DDB1	97	91.589	Ursus_maritimus
ENSGACG00000017182	ddb1	89	86.457	ENSVPAG00000007963	DDB1	87	86.457	Vicugna_pacos
ENSGACG00000017182	ddb1	100	90.651	ENSVVUG00000004987	DDB1	96	90.651	Vulpes_vulpes
ENSGACG00000017182	ddb1	100	87.671	ENSXETG00000008820	ddb1	96	87.671	Xenopus_tropicalis
ENSGACG00000017182	ddb1	90	97.959	ENSXCOG00000013956	ddb1	99	97.959	Xiphophorus_couchianus
ENSGACG00000017182	ddb1	98	97.944	ENSXMAG00000000022	ddb1	99	97.944	Xiphophorus_maculatus