EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017326 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 7957 bases
Position: chrgroupIV:6393478-6401434
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022882	RRM_1	PF00076.22	8.1e-25	1	1
ENSGACP00000022886	RRM_1	PF00076.22	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022925	-	1571	-	ENSGACP00000022882	410 (aa)	-	G3PZ42
ENSGACT00000022929	-	1855	-	ENSGACP00000022886	506 (aa)	-	G3PZ46

Gene Model

Click here to download ENSGACG00000017326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017326's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017326	cstf2	93	81.633	ENSG00000101811	CSTF2	85	86.667	Homo_sapiens
ENSGACG00000017326	cstf2	98	82.330	ENSAPOG00000005630	cstf2	97	81.625	Acanthochromis_polyacanthus
ENSGACG00000017326	cstf2	93	81.633	ENSAMEG00000002082	CSTF2	99	54.153	Ailuropoda_melanoleuca
ENSGACG00000017326	cstf2	98	71.983	ENSACIG00000012852	cstf2	97	77.062	Amphilophus_citrinellus
ENSGACG00000017326	cstf2	98	82.846	ENSAOCG00000020905	cstf2	97	82.524	Amphiprion_ocellaris
ENSGACG00000017326	cstf2	98	83.041	ENSAPEG00000006526	cstf2	97	82.718	Amphiprion_percula
ENSGACG00000017326	cstf2	98	79.191	ENSATEG00000018186	cstf2	97	77.927	Anabas_testudineus
ENSGACG00000017326	cstf2	91	83.673	ENSAPLG00000007255	CSTF2	98	54.941	Anas_platyrhynchos
ENSGACG00000017326	cstf2	94	81.633	ENSANAG00000022342	CSTF2	99	56.055	Aotus_nancymaae
ENSGACG00000017326	cstf2	98	81.323	ENSACLG00000000779	cstf2	93	80.077	Astatotilapia_calliptera
ENSGACG00000017326	cstf2	86	84.959	ENSAMXG00000021477	cstf2	96	96.970	Astyanax_mexicanus
ENSGACG00000017326	cstf2	93	81.633	ENSBTAG00000003547	CSTF2	99	56.110	Bos_taurus
ENSGACG00000017326	cstf2	94	81.633	ENSCJAG00000004422	CSTF2	99	56.055	Callithrix_jacchus
ENSGACG00000017326	cstf2	94	81.633	ENSCAFG00000017551	CSTF2	99	56.282	Canis_familiaris
ENSGACG00000017326	cstf2	93	81.633	ENSCAFG00020007619	CSTF2	99	56.660	Canis_lupus_dingo
ENSGACG00000017326	cstf2	93	81.633	ENSCHIG00000016994	CSTF2	99	56.110	Capra_hircus
ENSGACG00000017326	cstf2	94	81.633	ENSTSYG00000006529	CSTF2	99	56.401	Carlito_syrichta
ENSGACG00000017326	cstf2	94	81.633	ENSCPOG00000015255	CSTF2	84	88.462	Cavia_porcellus
ENSGACG00000017326	cstf2	94	81.633	ENSCCAG00000032975	CSTF2	99	56.055	Cebus_capucinus
ENSGACG00000017326	cstf2	94	81.633	ENSCATG00000022835	CSTF2	99	56.401	Cercocebus_atys
ENSGACG00000017326	cstf2	94	81.633	ENSCLAG00000001904	CSTF2	85	86.792	Chinchilla_lanigera
ENSGACG00000017326	cstf2	78	81.633	ENSCSAG00000010360	CSTF2	99	55.051	Chlorocebus_sabaeus
ENSGACG00000017326	cstf2	57	89.571	ENSCHOG00000012803	CSTF2	72	90.741	Choloepus_hoffmanni
ENSGACG00000017326	cstf2	94	81.633	ENSCPBG00000014293	CSTF2	92	64.828	Chrysemys_picta_bellii
ENSGACG00000017326	cstf2	94	81.633	ENSCANG00000030612	CSTF2	99	56.401	Colobus_angolensis_palliatus
ENSGACG00000017326	cstf2	98	57.238	ENSCGRG00001023023	Cstf2	99	57.313	Cricetulus_griseus_chok1gshd
ENSGACG00000017326	cstf2	98	58.904	ENSCGRG00000003897	Cstf2	99	56.923	Cricetulus_griseus_crigri
ENSGACG00000017326	cstf2	98	79.884	ENSCVAG00000005731	cstf2	97	77.649	Cyprinodon_variegatus
ENSGACG00000017326	cstf2	96	69.336	ENSDARG00000090788	cstf2	94	90.000	Danio_rerio
ENSGACG00000017326	cstf2	78	83.673	ENSDORG00000007195	Cstf2	87	86.420	Dipodomys_ordii
ENSGACG00000017326	cstf2	93	81.633	ENSEASG00005001216	CSTF2	99	54.774	Equus_asinus_asinus
ENSGACG00000017326	cstf2	93	81.633	ENSECAG00000009325	CSTF2	99	56.110	Equus_caballus
ENSGACG00000017326	cstf2	93	81.633	ENSFCAG00000007000	CSTF2	99	56.110	Felis_catus
ENSGACG00000017326	cstf2	82	83.673	ENSFALG00000003859	CSTF2	99	52.715	Ficedula_albicollis
ENSGACG00000017326	cstf2	94	81.633	ENSFDAG00000002416	CSTF2	99	56.401	Fukomys_damarensis
ENSGACG00000017326	cstf2	98	77.186	ENSFHEG00000017065	cstf2	93	76.371	Fundulus_heteroclitus
ENSGACG00000017326	cstf2	97	77.530	ENSGMOG00000005145	cstf2	100	78.745	Gadus_morhua
ENSGACG00000017326	cstf2	94	83.673	ENSGALG00000006760	CSTF2	99	58.319	Gallus_gallus
ENSGACG00000017326	cstf2	98	71.512	ENSGAFG00000020027	cstf2	98	72.453	Gambusia_affinis
ENSGACG00000017326	cstf2	94	81.633	ENSGAGG00000006037	CSTF2	99	55.537	Gopherus_agassizii
ENSGACG00000017326	cstf2	94	81.633	ENSGGOG00000022267	CSTF2	99	56.574	Gorilla_gorilla
ENSGACG00000017326	cstf2	98	81.202	ENSHBUG00000016183	cstf2	93	79.576	Haplochromis_burtoni
ENSGACG00000017326	cstf2	93	71.429	ENSHGLG00000013455	-	99	49.047	Heterocephalus_glaber_female
ENSGACG00000017326	cstf2	94	81.633	ENSHGLG00000000659	-	86	85.455	Heterocephalus_glaber_female
ENSGACG00000017326	cstf2	93	71.429	ENSHGLG00100015391	-	99	48.958	Heterocephalus_glaber_male
ENSGACG00000017326	cstf2	94	81.633	ENSHGLG00100001130	-	86	85.455	Heterocephalus_glaber_male
ENSGACG00000017326	cstf2	97	78.039	ENSHCOG00000005157	cstf2	97	78.125	Hippocampus_comes
ENSGACG00000017326	cstf2	94	83.529	ENSIPUG00000017839	cstf2	97	68.824	Ictalurus_punctatus
ENSGACG00000017326	cstf2	94	81.633	ENSSTOG00000023445	CSTF2	85	86.792	Ictidomys_tridecemlineatus
ENSGACG00000017326	cstf2	93	81.633	ENSJJAG00000020507	Cstf2	85	86.792	Jaculus_jaculus
ENSGACG00000017326	cstf2	98	67.010	ENSKMAG00000001068	cstf2	97	74.269	Kryptolebias_marmoratus
ENSGACG00000017326	cstf2	60	95.000	ENSLBEG00000028720	cstf2	86	95.161	Labrus_bergylta
ENSGACG00000017326	cstf2	94	80.392	ENSLACG00000015927	CSTF2	99	55.390	Latimeria_chalumnae
ENSGACG00000017326	cstf2	97	90.385	ENSLOCG00000015300	cstf2	80	90.385	Lepisosteus_oculatus
ENSGACG00000017326	cstf2	94	81.633	ENSLAFG00000000474	CSTF2	99	55.882	Loxodonta_africana
ENSGACG00000017326	cstf2	94	81.633	ENSMFAG00000043888	CSTF2	99	56.401	Macaca_fascicularis
ENSGACG00000017326	cstf2	94	81.633	ENSMMUG00000013008	CSTF2	99	55.119	Macaca_mulatta
ENSGACG00000017326	cstf2	94	81.633	ENSMNEG00000041824	CSTF2	99	56.401	Macaca_nemestrina
ENSGACG00000017326	cstf2	94	81.633	ENSMLEG00000036870	CSTF2	99	56.401	Mandrillus_leucophaeus
ENSGACG00000017326	cstf2	95	81.836	ENSMAMG00000020364	cstf2	96	81.038	Mastacembelus_armatus
ENSGACG00000017326	cstf2	98	81.323	ENSMZEG00005007200	cstf2	97	80.077	Maylandia_zebra
ENSGACG00000017326	cstf2	91	86.538	ENSMGAG00000004139	CSTF2	87	86.538	Meleagris_gallopavo
ENSGACG00000017326	cstf2	78	83.673	ENSMAUG00000000965	Cstf2	99	56.293	Mesocricetus_auratus
ENSGACG00000017326	cstf2	98	81.633	ENSMICG00000014121	CSTF2	99	56.282	Microcebus_murinus
ENSGACG00000017326	cstf2	78	83.673	ENSMOCG00000008081	Cstf2	99	54.833	Microtus_ochrogaster
ENSGACG00000017326	cstf2	91	81.633	ENSMODG00000011785	CSTF2	85	82.573	Monodelphis_domestica
ENSGACG00000017326	cstf2	94	83.673	MGP_CAROLIEiJ_G0033383	Cstf2	83	88.462	Mus_caroli
ENSGACG00000017326	cstf2	94	83.673	ENSMUSG00000031256	Cstf2	83	88.462	Mus_musculus
ENSGACG00000017326	cstf2	94	83.673	MGP_PahariEiJ_G0031923	Cstf2	99	57.070	Mus_pahari
ENSGACG00000017326	cstf2	94	83.673	MGP_SPRETEiJ_G0034548	Cstf2	83	88.462	Mus_spretus
ENSGACG00000017326	cstf2	93	81.633	ENSMPUG00000002339	CSTF2	82	78.543	Mustela_putorius_furo
ENSGACG00000017326	cstf2	90	81.633	ENSMLUG00000004598	CSTF2	80	78.947	Myotis_lucifugus
ENSGACG00000017326	cstf2	94	83.673	ENSNGAG00000021985	Cstf2	99	57.751	Nannospalax_galili
ENSGACG00000017326	cstf2	94	78.826	ENSNBRG00000021694	cstf2	100	79.665	Neolamprologus_brichardi
ENSGACG00000017326	cstf2	94	81.633	ENSNLEG00000007510	CSTF2	99	56.401	Nomascus_leucogenys
ENSGACG00000017326	cstf2	97	61.989	ENSMEUG00000011186	-	99	60.854	Notamacropus_eugenii
ENSGACG00000017326	cstf2	97	60.993	ENSMEUG00000007875	-	99	59.253	Notamacropus_eugenii
ENSGACG00000017326	cstf2	88	59.728	ENSMEUG00000014025	-	99	56.836	Notamacropus_eugenii
ENSGACG00000017326	cstf2	80	89.474	ENSOPRG00000003106	CSTF2	82	73.134	Ochotona_princeps
ENSGACG00000017326	cstf2	78	81.633	ENSODEG00000002059	CSTF2	99	56.228	Octodon_degus
ENSGACG00000017326	cstf2	80	94.231	ENSONIG00000002631	cstf2	88	96.364	Oreochromis_niloticus
ENSGACG00000017326	cstf2	91	85.714	ENSOANG00000004208	CSTF2	71	86.538	Ornithorhynchus_anatinus
ENSGACG00000017326	cstf2	82	75.000	ENSOCUG00000010468	CSTF2	99	56.672	Oryctolagus_cuniculus
ENSGACG00000017326	cstf2	98	78.978	ENSORLG00000001380	cstf2	97	77.344	Oryzias_latipes
ENSGACG00000017326	cstf2	98	79.843	ENSORLG00020021917	cstf2	97	77.734	Oryzias_latipes_hni
ENSGACG00000017326	cstf2	98	79.175	ENSORLG00015011996	cstf2	97	77.539	Oryzias_latipes_hsok
ENSGACG00000017326	cstf2	98	79.297	ENSOMEG00000015507	cstf2	97	78.711	Oryzias_melastigma
ENSGACG00000017326	cstf2	93	81.633	ENSOGAG00000011192	CSTF2	51	45.238	Otolemur_garnettii
ENSGACG00000017326	cstf2	93	81.633	ENSOARG00000001022	CSTF2	99	56.110	Ovis_aries
ENSGACG00000017326	cstf2	94	81.633	ENSPPAG00000031804	CSTF2	99	56.574	Pan_paniscus
ENSGACG00000017326	cstf2	93	81.633	ENSPPRG00000022492	CSTF2	99	56.110	Panthera_pardus
ENSGACG00000017326	cstf2	93	81.633	ENSPTIG00000009922	CSTF2	99	55.766	Panthera_tigris_altaica
ENSGACG00000017326	cstf2	94	81.633	ENSPTRG00000022090	CSTF2	99	56.574	Pan_troglodytes
ENSGACG00000017326	cstf2	94	81.633	ENSPANG00000002303	CSTF2	99	56.401	Papio_anubis
ENSGACG00000017326	cstf2	91	82.264	ENSPKIG00000005033	cstf2	97	66.799	Paramormyrops_kingsleyae
ENSGACG00000017326	cstf2	98	79.884	ENSPMGG00000006534	cstf2	97	79.344	Periophthalmus_magnuspinnatus
ENSGACG00000017326	cstf2	98	57.627	ENSPEMG00000019415	Cstf2	99	54.305	Peromyscus_maniculatus_bairdii
ENSGACG00000017326	cstf2	92	81.633	ENSPCIG00000002989	CSTF2	79	81.579	Phascolarctos_cinereus
ENSGACG00000017326	cstf2	98	70.229	ENSPLAG00000011176	cstf2	85	84.615	Poecilia_latipinna
ENSGACG00000017326	cstf2	98	70.229	ENSPMEG00000017743	cstf2	86	84.615	Poecilia_mexicana
ENSGACG00000017326	cstf2	86	87.449	ENSPREG00000011481	cstf2	97	70.107	Poecilia_reticulata
ENSGACG00000017326	cstf2	78	81.633	ENSPPYG00000020541	CSTF2	99	55.051	Pongo_abelii
ENSGACG00000017326	cstf2	94	81.633	ENSPCOG00000027744	CSTF2	99	56.574	Propithecus_coquereli
ENSGACG00000017326	cstf2	90	81.633	ENSPVAG00000008342	CSTF2	90	53.247	Pteropus_vampyrus
ENSGACG00000017326	cstf2	51	93.151	ENSPNYG00000010852	cstf2	95	92.105	Pundamilia_nyererei
ENSGACG00000017326	cstf2	92	84.082	ENSPNAG00000018887	cstf2	98	70.553	Pygocentrus_nattereri
ENSGACG00000017326	cstf2	94	83.673	ENSRNOG00000048025	Cstf2	99	54.576	Rattus_norvegicus
ENSGACG00000017326	cstf2	94	81.633	ENSRBIG00000030745	CSTF2	99	56.696	Rhinopithecus_bieti
ENSGACG00000017326	cstf2	94	81.633	ENSRROG00000045042	CSTF2	99	56.110	Rhinopithecus_roxellana
ENSGACG00000017326	cstf2	93	81.633	ENSSBOG00000021649	CSTF2	99	56.055	Saimiri_boliviensis_boliviensis
ENSGACG00000017326	cstf2	93	81.633	ENSSHAG00000003681	CSTF2	72	84.615	Sarcophilus_harrisii
ENSGACG00000017326	cstf2	97	82.397	ENSSFOG00015006348	cstf2	98	68.260	Scleropages_formosus
ENSGACG00000017326	cstf2	98	81.961	ENSSMAG00000013463	cstf2	97	82.227	Scophthalmus_maximus
ENSGACG00000017326	cstf2	97	56.579	ENSSPUG00000005288	-	52	81.707	Sphenodon_punctatus
ENSGACG00000017326	cstf2	94	81.633	ENSSSCG00000012486	CSTF2	99	56.110	Sus_scrofa
ENSGACG00000017326	cstf2	94	83.673	ENSTGUG00000002253	CSTF2	99	56.784	Taeniopygia_guttata
ENSGACG00000017326	cstf2	97	80.273	ENSTNIG00000016860	cstf2	99	79.492	Tetraodon_nigroviridis
ENSGACG00000017326	cstf2	93	81.633	ENSTTRG00000013556	CSTF2	99	56.228	Tursiops_truncatus
ENSGACG00000017326	cstf2	93	81.633	ENSUAMG00000026605	CSTF2	99	56.871	Ursus_americanus
ENSGACG00000017326	cstf2	98	73.118	ENSUMAG00000012417	CSTF2	85	78.138	Ursus_maritimus
ENSGACG00000017326	cstf2	75	68.116	ENSVPAG00000006466	CSTF2	66	66.082	Vicugna_pacos
ENSGACG00000017326	cstf2	93	81.633	ENSVVUG00000004717	CSTF2	99	56.282	Vulpes_vulpes
ENSGACG00000017326	cstf2	96	85.714	ENSXETG00000009642	cstf2	77	80.753	Xenopus_tropicalis
ENSGACG00000017326	cstf2	66	98.485	ENSXCOG00000016436	cstf2	95	88.312	Xiphophorus_couchianus
ENSGACG00000017326	cstf2	85	86.939	ENSXMAG00000013524	cstf2	97	71.892	Xiphophorus_maculatus