EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017361 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5923 bases
Position: chrgroupIII:13702221-13708143
Accession: ZDB-GENE-030826-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000022947	efThoc1	PF11957.8	1.8e-142	1	1
ENSGACP00000022945	efThoc1	PF11957.8	1.9e-142	1	1
ENSGACP00000022965	efThoc1	PF11957.8	1.4e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000022988	-	1987	-	ENSGACP00000022945	659 (aa)	-	G3PZA5
ENSGACT00000023002	-	1586	-	ENSGACP00000022959	59 (aa)	-	G3PZB9
ENSGACT00000023008	-	1160	-	ENSGACP00000022965	377 (aa)	-	G3PZC5
ENSGACT00000022990	-	2114	-	ENSGACP00000022947	654 (aa)	-	G3PZA7

Gene Model

Click here to download ENSGACG00000017361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017361's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017361	thoc1	99	72.881	ENSG00000079134	THOC1	99	77.941	Homo_sapiens
ENSGACG00000017361	thoc1	59	87.500	ENSAPOG00000015470	thoc1	99	87.500	Acanthochromis_polyacanthus
ENSGACG00000017361	thoc1	59	87.500	ENSAPOG00000015530	-	99	87.500	Acanthochromis_polyacanthus
ENSGACG00000017361	thoc1	99	72.881	ENSAMEG00000006645	THOC1	99	72.256	Ailuropoda_melanoleuca
ENSGACG00000017361	thoc1	94	90.228	ENSACIG00000019392	thoc1	95	90.228	Amphilophus_citrinellus
ENSGACG00000017361	thoc1	96	91.989	ENSAOCG00000008391	thoc1	100	87.309	Amphiprion_ocellaris
ENSGACG00000017361	thoc1	100	92.813	ENSAPEG00000001093	thoc1	100	92.813	Amphiprion_percula
ENSGACG00000017361	thoc1	100	92.355	ENSATEG00000004783	thoc1	100	92.355	Anabas_testudineus
ENSGACG00000017361	thoc1	94	76.836	ENSAPLG00000016149	THOC1	97	72.755	Anas_platyrhynchos
ENSGACG00000017361	thoc1	99	71.846	ENSACAG00000008307	THOC1	97	70.884	Anolis_carolinensis
ENSGACG00000017361	thoc1	95	76.816	ENSANAG00000033200	THOC1	99	71.644	Aotus_nancymaae
ENSGACG00000017361	thoc1	55	68.421	ENSANAG00000020363	-	81	67.708	Aotus_nancymaae
ENSGACG00000017361	thoc1	100	91.590	ENSACLG00000016836	thoc1	100	91.590	Astatotilapia_calliptera
ENSGACG00000017361	thoc1	94	76.800	ENSAMXG00000014708	thoc1	97	76.122	Astyanax_mexicanus
ENSGACG00000017361	thoc1	99	73.190	ENSBTAG00000019215	THOC1	99	72.561	Bos_taurus
ENSGACG00000017361	thoc1	83	35.736	WBGene00020172	thoc-1	73	35.211	Caenorhabditis_elegans
ENSGACG00000017361	thoc1	99	73.035	ENSCJAG00000020450	THOC1	99	72.409	Callithrix_jacchus
ENSGACG00000017361	thoc1	99	73.035	ENSCAFG00000018324	THOC1	99	72.409	Canis_familiaris
ENSGACG00000017361	thoc1	99	73.035	ENSCAFG00020017894	THOC1	99	72.409	Canis_lupus_dingo
ENSGACG00000017361	thoc1	99	73.190	ENSCHIG00000015399	THOC1	99	73.250	Capra_hircus
ENSGACG00000017361	thoc1	99	72.573	ENSTSYG00000010585	THOC1	99	71.951	Carlito_syrichta
ENSGACG00000017361	thoc1	92	62.644	ENSCAPG00000016270	THOC1	98	52.000	Cavia_aperea
ENSGACG00000017361	thoc1	96	75.549	ENSCPOG00000000959	THOC1	100	71.299	Cavia_porcellus
ENSGACG00000017361	thoc1	99	73.035	ENSCCAG00000025766	THOC1	99	72.409	Cebus_capucinus
ENSGACG00000017361	thoc1	95	76.816	ENSCATG00000028180	THOC1	99	76.816	Cercocebus_atys
ENSGACG00000017361	thoc1	97	73.428	ENSCLAG00000009117	THOC1	99	73.428	Chinchilla_lanigera
ENSGACG00000017361	thoc1	99	73.035	ENSCSAG00000017631	THOC1	99	72.409	Chlorocebus_sabaeus
ENSGACG00000017361	thoc1	79	77.917	ENSCHOG00000010609	THOC1	79	77.917	Choloepus_hoffmanni
ENSGACG00000017361	thoc1	96	76.796	ENSCPBG00000027558	THOC1	99	73.160	Chrysemys_picta_bellii
ENSGACG00000017361	thoc1	95	48.209	ENSCING00000007663	-	99	47.390	Ciona_intestinalis
ENSGACG00000017361	thoc1	94	47.244	ENSCSAVG00000010649	-	100	46.994	Ciona_savignyi
ENSGACG00000017361	thoc1	99	72.881	ENSCANG00000034265	THOC1	99	77.119	Colobus_angolensis_palliatus
ENSGACG00000017361	thoc1	99	71.957	ENSCGRG00001016464	Thoc1	99	71.494	Cricetulus_griseus_chok1gshd
ENSGACG00000017361	thoc1	90	58.913	ENSCGRG00000003390	-	99	58.389	Cricetulus_griseus_crigri
ENSGACG00000017361	thoc1	99	71.827	ENSCGRG00000010269	-	99	72.642	Cricetulus_griseus_crigri
ENSGACG00000017361	thoc1	99	88.602	ENSCSEG00000012486	thoc1	99	89.068	Cynoglossus_semilaevis
ENSGACG00000017361	thoc1	100	88.991	ENSCVAG00000020600	thoc1	100	88.991	Cyprinodon_variegatus
ENSGACG00000017361	thoc1	99	83.051	ENSDARG00000088246	thoc1	99	83.051	Danio_rerio
ENSGACG00000017361	thoc1	95	76.816	ENSDNOG00000019217	THOC1	99	72.061	Dasypus_novemcinctus
ENSGACG00000017361	thoc1	97	69.182	ENSDORG00000008060	Thoc1	98	69.134	Dipodomys_ordii
ENSGACG00000017361	thoc1	95	41.842	FBgn0037382	Hpr1	74	41.367	Drosophila_melanogaster
ENSGACG00000017361	thoc1	89	56.239	ENSETEG00000004165	THOC1	98	56.239	Echinops_telfairi
ENSGACG00000017361	thoc1	83	74.522	ENSEBUG00000005998	thoc1	97	64.441	Eptatretus_burgeri
ENSGACG00000017361	thoc1	99	72.573	ENSEASG00005002549	THOC1	95	71.189	Equus_asinus_asinus
ENSGACG00000017361	thoc1	99	73.035	ENSECAG00000009267	THOC1	89	72.409	Equus_caballus
ENSGACG00000017361	thoc1	80	57.447	ENSEEUG00000012214	-	82	57.447	Erinaceus_europaeus
ENSGACG00000017361	thoc1	99	87.443	ENSELUG00000023277	thoc1	99	87.443	Esox_lucius
ENSGACG00000017361	thoc1	99	73.190	ENSFCAG00000022454	THOC1	86	72.561	Felis_catus
ENSGACG00000017361	thoc1	92	77.874	ENSFALG00000006205	THOC1	98	73.197	Ficedula_albicollis
ENSGACG00000017361	thoc1	98	72.671	ENSFDAG00000006842	THOC1	99	72.784	Fukomys_damarensis
ENSGACG00000017361	thoc1	100	89.450	ENSFHEG00000008841	thoc1	100	89.450	Fundulus_heteroclitus
ENSGACG00000017361	thoc1	99	89.724	ENSGMOG00000011486	thoc1	99	89.724	Gadus_morhua
ENSGACG00000017361	thoc1	96	76.519	ENSGALG00000014915	THOC1	99	71.667	Gallus_gallus
ENSGACG00000017361	thoc1	100	88.379	ENSGAFG00000021464	thoc1	100	88.379	Gambusia_affinis
ENSGACG00000017361	thoc1	56	60.000	ENSGAGG00000014067	-	69	61.667	Gopherus_agassizii
ENSGACG00000017361	thoc1	96	77.348	ENSGAGG00000021230	-	97	73.660	Gopherus_agassizii
ENSGACG00000017361	thoc1	99	73.035	ENSGGOG00000003013	THOC1	99	72.409	Gorilla_gorilla
ENSGACG00000017361	thoc1	100	91.896	ENSHBUG00000009096	thoc1	100	91.896	Haplochromis_burtoni
ENSGACG00000017361	thoc1	96	76.374	ENSHGLG00000003712	-	100	72.054	Heterocephalus_glaber_female
ENSGACG00000017361	thoc1	86	63.720	ENSHGLG00000009264	-	99	66.667	Heterocephalus_glaber_female
ENSGACG00000017361	thoc1	85	60.308	ENSHGLG00100002225	-	97	60.308	Heterocephalus_glaber_male
ENSGACG00000017361	thoc1	96	76.099	ENSHGLG00100003570	THOC1	100	71.903	Heterocephalus_glaber_male
ENSGACG00000017361	thoc1	81	84.365	ENSHCOG00000017981	thoc1	98	84.365	Hippocampus_comes
ENSGACG00000017361	thoc1	89	81.321	ENSIPUG00000005306	thoc1	100	69.040	Ictalurus_punctatus
ENSGACG00000017361	thoc1	99	72.881	ENSSTOG00000006484	THOC1	99	72.256	Ictidomys_tridecemlineatus
ENSGACG00000017361	thoc1	94	72.753	ENSJJAG00000014893	-	99	72.753	Jaculus_jaculus
ENSGACG00000017361	thoc1	100	90.826	ENSKMAG00000003904	thoc1	100	90.826	Kryptolebias_marmoratus
ENSGACG00000017361	thoc1	100	91.896	ENSLBEG00000020372	thoc1	98	91.896	Labrus_bergylta
ENSGACG00000017361	thoc1	96	77.348	ENSLACG00000014869	THOC1	99	73.313	Latimeria_chalumnae
ENSGACG00000017361	thoc1	100	82.040	ENSLOCG00000002097	thoc1	99	81.735	Lepisosteus_oculatus
ENSGACG00000017361	thoc1	99	72.573	ENSLAFG00000009585	THOC1	99	71.951	Loxodonta_africana
ENSGACG00000017361	thoc1	99	73.035	ENSMFAG00000041520	THOC1	99	72.409	Macaca_fascicularis
ENSGACG00000017361	thoc1	99	73.035	ENSMMUG00000004662	THOC1	99	72.409	Macaca_mulatta
ENSGACG00000017361	thoc1	99	73.035	ENSMNEG00000040177	THOC1	99	72.409	Macaca_nemestrina
ENSGACG00000017361	thoc1	99	73.035	ENSMLEG00000034201	THOC1	99	72.409	Mandrillus_leucophaeus
ENSGACG00000017361	thoc1	96	88.995	ENSMAMG00000016747	thoc1	100	88.995	Mastacembelus_armatus
ENSGACG00000017361	thoc1	100	91.590	ENSMZEG00005024609	thoc1	100	91.590	Maylandia_zebra
ENSGACG00000017361	thoc1	97	72.770	ENSMGAG00000009811	THOC1	99	72.884	Meleagris_gallopavo
ENSGACG00000017361	thoc1	99	71.803	ENSMAUG00000010272	Thoc1	99	71.189	Mesocricetus_auratus
ENSGACG00000017361	thoc1	99	73.035	ENSMICG00000027200	THOC1	99	72.409	Microcebus_murinus
ENSGACG00000017361	thoc1	95	75.766	ENSMOCG00000014536	-	86	70.534	Microtus_ochrogaster
ENSGACG00000017361	thoc1	99	62.558	ENSMOCG00000014924	-	96	61.433	Microtus_ochrogaster
ENSGACG00000017361	thoc1	93	91.340	ENSMMOG00000011772	thoc1	100	91.340	Mola_mola
ENSGACG00000017361	thoc1	99	71.603	ENSMODG00000021482	THOC1	98	71.713	Monodelphis_domestica
ENSGACG00000017361	thoc1	100	90.520	ENSMALG00000021872	thoc1	100	90.520	Monopterus_albus
ENSGACG00000017361	thoc1	99	71.803	MGP_CAROLIEiJ_G0021989	Thoc1	99	71.189	Mus_caroli
ENSGACG00000017361	thoc1	95	75.766	ENSMUSG00000024287	Thoc1	99	71.037	Mus_musculus
ENSGACG00000017361	thoc1	95	75.766	MGP_PahariEiJ_G0018726	Thoc1	99	71.037	Mus_pahari
ENSGACG00000017361	thoc1	95	75.766	MGP_SPRETEiJ_G0022905	Thoc1	99	71.037	Mus_spretus
ENSGACG00000017361	thoc1	99	72.881	ENSMPUG00000005448	THOC1	99	72.256	Mustela_putorius_furo
ENSGACG00000017361	thoc1	95	70.028	ENSMLUG00000027965	-	98	67.288	Myotis_lucifugus
ENSGACG00000017361	thoc1	95	76.045	ENSMLUG00000004090	-	99	71.341	Myotis_lucifugus
ENSGACG00000017361	thoc1	95	66.106	ENSMLUG00000024912	-	98	67.008	Myotis_lucifugus
ENSGACG00000017361	thoc1	97	57.771	ENSNGAG00000008061	-	97	57.953	Nannospalax_galili
ENSGACG00000017361	thoc1	99	72.573	ENSNGAG00000001401	-	99	71.951	Nannospalax_galili
ENSGACG00000017361	thoc1	98	89.812	ENSNBRG00000005991	thoc1	97	89.812	Neolamprologus_brichardi
ENSGACG00000017361	thoc1	99	73.035	ENSNLEG00000006835	THOC1	99	72.409	Nomascus_leucogenys
ENSGACG00000017361	thoc1	92	77.101	ENSMEUG00000009756	THOC1	82	76.660	Notamacropus_eugenii
ENSGACG00000017361	thoc1	99	58.706	ENSOPRG00000001108	THOC1	99	58.232	Ochotona_princeps
ENSGACG00000017361	thoc1	100	66.616	ENSODEG00000006623	THOC1	100	66.616	Octodon_degus
ENSGACG00000017361	thoc1	100	91.806	ENSONIG00000009440	thoc1	99	91.806	Oreochromis_niloticus
ENSGACG00000017361	thoc1	65	76.829	ENSOANG00000008228	-	92	76.829	Ornithorhynchus_anatinus
ENSGACG00000017361	thoc1	99	72.881	ENSOCUG00000011601	THOC1	99	72.256	Oryctolagus_cuniculus
ENSGACG00000017361	thoc1	100	91.743	ENSORLG00000017629	thoc1	100	91.743	Oryzias_latipes
ENSGACG00000017361	thoc1	100	91.896	ENSORLG00020007567	thoc1	100	91.896	Oryzias_latipes_hni
ENSGACG00000017361	thoc1	100	91.743	ENSORLG00015007356	thoc1	100	91.743	Oryzias_latipes_hsok
ENSGACG00000017361	thoc1	100	91.131	ENSOMEG00000008200	thoc1	100	90.520	Oryzias_melastigma
ENSGACG00000017361	thoc1	95	76.536	ENSOGAG00000000470	THOC1	99	69.207	Otolemur_garnettii
ENSGACG00000017361	thoc1	98	73.406	ENSOARG00000009238	THOC1	98	72.769	Ovis_aries
ENSGACG00000017361	thoc1	99	73.035	ENSPPAG00000031812	THOC1	99	72.409	Pan_paniscus
ENSGACG00000017361	thoc1	95	77.095	ENSPPRG00000023794	THOC1	99	76.816	Panthera_pardus
ENSGACG00000017361	thoc1	95	77.095	ENSPTIG00000007469	THOC1	99	76.816	Panthera_tigris_altaica
ENSGACG00000017361	thoc1	95	76.536	ENSPTRG00000009816	THOC1	99	71.493	Pan_troglodytes
ENSGACG00000017361	thoc1	95	76.816	ENSPANG00000008665	THOC1	99	71.515	Papio_anubis
ENSGACG00000017361	thoc1	100	83.511	ENSPKIG00000005906	thoc1	100	84.122	Paramormyrops_kingsleyae
ENSGACG00000017361	thoc1	81	76.136	ENSPSIG00000007691	THOC1	97	76.136	Pelodiscus_sinensis
ENSGACG00000017361	thoc1	94	85.645	ENSPMGG00000008279	thoc1	95	85.737	Periophthalmus_magnuspinnatus
ENSGACG00000017361	thoc1	99	71.803	ENSPEMG00000021789	Thoc1	99	71.189	Peromyscus_maniculatus_bairdii
ENSGACG00000017361	thoc1	74	72.653	ENSPCIG00000026942	THOC1	97	72.802	Phascolarctos_cinereus
ENSGACG00000017361	thoc1	100	88.226	ENSPFOG00000011673	thoc1	100	88.226	Poecilia_formosa
ENSGACG00000017361	thoc1	100	88.379	ENSPLAG00000019648	thoc1	100	88.379	Poecilia_latipinna
ENSGACG00000017361	thoc1	100	88.379	ENSPMEG00000007083	thoc1	100	88.379	Poecilia_mexicana
ENSGACG00000017361	thoc1	100	88.379	ENSPREG00000006719	thoc1	100	88.379	Poecilia_reticulata
ENSGACG00000017361	thoc1	95	76.816	ENSPPYG00000009049	-	97	77.019	Pongo_abelii
ENSGACG00000017361	thoc1	95	74.302	ENSPCAG00000005320	THOC1	91	73.958	Procavia_capensis
ENSGACG00000017361	thoc1	95	76.536	ENSPCOG00000009234	THOC1	99	71.646	Propithecus_coquereli
ENSGACG00000017361	thoc1	95	76.257	ENSPVAG00000004007	THOC1	99	70.732	Pteropus_vampyrus
ENSGACG00000017361	thoc1	100	91.896	ENSPNYG00000019152	thoc1	100	91.896	Pundamilia_nyererei
ENSGACG00000017361	thoc1	100	82.569	ENSPNAG00000023390	thoc1	100	82.110	Pygocentrus_nattereri
ENSGACG00000017361	thoc1	90	51.429	ENSRNOG00000015332	Thoc1	95	51.429	Rattus_norvegicus
ENSGACG00000017361	thoc1	95	76.816	ENSRBIG00000033738	THOC1	98	74.913	Rhinopithecus_bieti
ENSGACG00000017361	thoc1	99	73.035	ENSRROG00000044988	THOC1	99	77.119	Rhinopithecus_roxellana
ENSGACG00000017361	thoc1	59	62.667	ENSSBOG00000028733	-	78	62.319	Saimiri_boliviensis_boliviensis
ENSGACG00000017361	thoc1	99	72.727	ENSSBOG00000016556	THOC1	99	72.104	Saimiri_boliviensis_boliviensis
ENSGACG00000017361	thoc1	99	72.504	ENSSHAG00000014829	THOC1	98	72.573	Sarcophilus_harrisii
ENSGACG00000017361	thoc1	100	85.321	ENSSFOG00015021527	thoc1	100	85.321	Scleropages_formosus
ENSGACG00000017361	thoc1	100	88.872	ENSSMAG00000018465	thoc1	99	88.974	Scophthalmus_maximus
ENSGACG00000017361	thoc1	100	92.661	ENSSDUG00000016810	thoc1	100	92.661	Seriola_dumerili
ENSGACG00000017361	thoc1	100	92.661	ENSSLDG00000015555	thoc1	100	92.661	Seriola_lalandi_dorsalis
ENSGACG00000017361	thoc1	87	73.828	ENSSARG00000006910	THOC1	87	73.828	Sorex_araneus
ENSGACG00000017361	thoc1	98	72.784	ENSSPUG00000007238	THOC1	98	72.531	Sphenodon_punctatus
ENSGACG00000017361	thoc1	100	86.890	ENSSPAG00000018847	thoc1	99	86.890	Stegastes_partitus
ENSGACG00000017361	thoc1	99	73.035	ENSSSCG00000025653	THOC1	93	72.409	Sus_scrofa
ENSGACG00000017361	thoc1	96	76.796	ENSTGUG00000010204	THOC1	99	73.006	Taeniopygia_guttata
ENSGACG00000017361	thoc1	100	89.908	ENSTRUG00000013518	thoc1	100	89.908	Takifugu_rubripes
ENSGACG00000017361	thoc1	100	89.450	ENSTNIG00000008473	thoc1	99	89.555	Tetraodon_nigroviridis
ENSGACG00000017361	thoc1	99	65.794	ENSTBEG00000016920	THOC1	98	65.895	Tupaia_belangeri
ENSGACG00000017361	thoc1	99	66.872	ENSTTRG00000016664	THOC1	99	66.311	Tursiops_truncatus
ENSGACG00000017361	thoc1	99	73.035	ENSUAMG00000002527	THOC1	99	72.409	Ursus_americanus
ENSGACG00000017361	thoc1	99	73.035	ENSUMAG00000019693	THOC1	99	72.409	Ursus_maritimus
ENSGACG00000017361	thoc1	67	67.500	ENSVPAG00000003726	-	67	67.500	Vicugna_pacos
ENSGACG00000017361	thoc1	99	73.035	ENSVVUG00000004384	THOC1	99	72.409	Vulpes_vulpes
ENSGACG00000017361	thoc1	96	75.549	ENSXETG00000003155	thoc1	97	69.909	Xenopus_tropicalis
ENSGACG00000017361	thoc1	98	81.453	ENSXCOG00000016085	thoc1	89	84.691	Xiphophorus_couchianus
ENSGACG00000017361	thoc1	100	88.991	ENSXMAG00000002353	thoc1	100	88.991	Xiphophorus_maculatus