EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017474 (Gene tree)
Gene ID: -
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase-like 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 6720 bases
Position: chrgroupXIV:7939259-7945978
Accession: ZDB-GENE-040930-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023096	RTC	PF01137.21	1.2e-58	1	1
ENSGACP00000023096	RTC_insert	PF05189.13	3.2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000023140	-	1182	-	ENSGACP00000023096	372 (aa)	-	G3PZQ6

Gene Model

Click here to download ENSGACG00000017474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017474	rcl1	100	77.540	ENSG00000120158	RCL1	100	80.093	Homo_sapiens
ENSGACG00000017474	rcl1	100	89.247	ENSAPOG00000015666	rcl1	100	89.247	Acanthochromis_polyacanthus
ENSGACG00000017474	rcl1	100	78.610	ENSAMEG00000002631	RCL1	100	78.610	Ailuropoda_melanoleuca
ENSGACG00000017474	rcl1	100	87.634	ENSACIG00000021195	rcl1	100	87.634	Amphilophus_citrinellus
ENSGACG00000017474	rcl1	100	88.441	ENSAOCG00000002223	rcl1	100	88.441	Amphiprion_ocellaris
ENSGACG00000017474	rcl1	100	88.978	ENSAPEG00000006905	rcl1	100	88.978	Amphiprion_percula
ENSGACG00000017474	rcl1	100	89.785	ENSATEG00000020026	rcl1	100	89.785	Anabas_testudineus
ENSGACG00000017474	rcl1	88	75.380	ENSAPLG00000006031	RCL1	100	75.380	Anas_platyrhynchos
ENSGACG00000017474	rcl1	100	71.925	ENSACAG00000003640	RCL1	100	71.925	Anolis_carolinensis
ENSGACG00000017474	rcl1	100	77.540	ENSANAG00000037372	RCL1	100	77.540	Aotus_nancymaae
ENSGACG00000017474	rcl1	100	87.366	ENSACLG00000021724	rcl1	100	87.366	Astatotilapia_calliptera
ENSGACG00000017474	rcl1	99	81.250	ENSAMXG00000033394	rcl1	99	81.250	Astyanax_mexicanus
ENSGACG00000017474	rcl1	99	46.561	WBGene00022852	ZK1127.5	99	46.561	Caenorhabditis_elegans
ENSGACG00000017474	rcl1	100	77.273	ENSCJAG00000011202	RCL1	100	77.273	Callithrix_jacchus
ENSGACG00000017474	rcl1	100	78.877	ENSCAFG00000002091	RCL1	100	78.877	Canis_familiaris
ENSGACG00000017474	rcl1	100	78.877	ENSCAFG00020000638	RCL1	78	78.877	Canis_lupus_dingo
ENSGACG00000017474	rcl1	100	77.540	ENSCHIG00000012407	RCL1	100	77.540	Capra_hircus
ENSGACG00000017474	rcl1	88	79.878	ENSTSYG00000009592	RCL1	97	80.220	Carlito_syrichta
ENSGACG00000017474	rcl1	67	68.639	ENSCAPG00000013575	RCL1	100	68.639	Cavia_aperea
ENSGACG00000017474	rcl1	100	77.807	ENSCPOG00000015354	RCL1	100	77.807	Cavia_porcellus
ENSGACG00000017474	rcl1	100	77.273	ENSCCAG00000033505	RCL1	100	77.273	Cebus_capucinus
ENSGACG00000017474	rcl1	100	77.807	ENSCATG00000034721	RCL1	100	77.807	Cercocebus_atys
ENSGACG00000017474	rcl1	100	78.075	ENSCLAG00000007445	RCL1	100	78.075	Chinchilla_lanigera
ENSGACG00000017474	rcl1	100	77.540	ENSCSAG00000008811	RCL1	100	77.540	Chlorocebus_sabaeus
ENSGACG00000017474	rcl1	86	69.350	ENSCHOG00000007216	RCL1	100	69.350	Choloepus_hoffmanni
ENSGACG00000017474	rcl1	100	75.134	ENSCPBG00000025481	RCL1	94	76.364	Chrysemys_picta_bellii
ENSGACG00000017474	rcl1	100	58.400	ENSCING00000019565	-	99	58.400	Ciona_intestinalis
ENSGACG00000017474	rcl1	100	77.540	ENSCANG00000027099	RCL1	100	77.540	Colobus_angolensis_palliatus
ENSGACG00000017474	rcl1	100	77.807	ENSCGRG00001013748	Rcl1	100	77.807	Cricetulus_griseus_chok1gshd
ENSGACG00000017474	rcl1	88	79.635	ENSCGRG00000005843	Rcl1	99	79.635	Cricetulus_griseus_crigri
ENSGACG00000017474	rcl1	100	86.828	ENSCSEG00000000712	rcl1	98	86.828	Cynoglossus_semilaevis
ENSGACG00000017474	rcl1	100	88.710	ENSCVAG00000011536	rcl1	100	88.710	Cyprinodon_variegatus
ENSGACG00000017474	rcl1	99	80.654	ENSDARG00000038312	rcl1	100	80.654	Danio_rerio
ENSGACG00000017474	rcl1	72	80.075	ENSDNOG00000019911	RCL1	100	81.481	Dasypus_novemcinctus
ENSGACG00000017474	rcl1	99	78.108	ENSDORG00000015645	Rcl1	99	78.108	Dipodomys_ordii
ENSGACG00000017474	rcl1	99	52.646	FBgn0020909	Rtc1	98	53.439	Drosophila_melanogaster
ENSGACG00000017474	rcl1	88	54.878	ENSETEG00000014087	-	100	54.878	Echinops_telfairi
ENSGACG00000017474	rcl1	100	56.568	ENSEBUG00000016621	-	99	56.568	Eptatretus_burgeri
ENSGACG00000017474	rcl1	100	77.540	ENSEASG00005010653	RCL1	100	77.540	Equus_asinus_asinus
ENSGACG00000017474	rcl1	100	77.540	ENSECAG00000015973	RCL1	100	77.540	Equus_caballus
ENSGACG00000017474	rcl1	99	66.757	ENSEEUG00000009801	RCL1	99	66.757	Erinaceus_europaeus
ENSGACG00000017474	rcl1	100	81.720	ENSELUG00000007353	rcl1	100	81.720	Esox_lucius
ENSGACG00000017474	rcl1	99	78.108	ENSFCAG00000014557	RCL1	99	78.108	Felis_catus
ENSGACG00000017474	rcl1	99	69.459	ENSFALG00000010553	RCL1	96	69.459	Ficedula_albicollis
ENSGACG00000017474	rcl1	88	78.659	ENSFDAG00000004209	RCL1	100	78.659	Fukomys_damarensis
ENSGACG00000017474	rcl1	100	88.172	ENSFHEG00000011228	rcl1	100	88.172	Fundulus_heteroclitus
ENSGACG00000017474	rcl1	100	81.720	ENSGMOG00000004677	rcl1	100	81.720	Gadus_morhua
ENSGACG00000017474	rcl1	99	73.243	ENSGALG00000015024	RCL1	99	73.243	Gallus_gallus
ENSGACG00000017474	rcl1	100	88.441	ENSGAFG00000007257	rcl1	100	88.441	Gambusia_affinis
ENSGACG00000017474	rcl1	100	75.134	ENSGAGG00000003689	RCL1	100	75.134	Gopherus_agassizii
ENSGACG00000017474	rcl1	100	77.273	ENSGGOG00000015041	RCL1	100	77.273	Gorilla_gorilla
ENSGACG00000017474	rcl1	100	87.903	ENSHBUG00000001393	rcl1	100	87.903	Haplochromis_burtoni
ENSGACG00000017474	rcl1	100	64.171	ENSHGLG00000005368	-	100	64.171	Heterocephalus_glaber_female
ENSGACG00000017474	rcl1	100	77.807	ENSHGLG00000016452	RCL1	100	77.807	Heterocephalus_glaber_female
ENSGACG00000017474	rcl1	100	64.706	ENSHGLG00100018010	-	100	64.706	Heterocephalus_glaber_male
ENSGACG00000017474	rcl1	100	73.262	ENSHGLG00100008718	-	100	73.262	Heterocephalus_glaber_male
ENSGACG00000017474	rcl1	100	89.247	ENSHCOG00000020170	rcl1	100	89.247	Hippocampus_comes
ENSGACG00000017474	rcl1	100	83.871	ENSIPUG00000018054	RCL1	100	83.871	Ictalurus_punctatus
ENSGACG00000017474	rcl1	100	77.273	ENSSTOG00000000023	RCL1	100	77.273	Ictidomys_tridecemlineatus
ENSGACG00000017474	rcl1	99	69.189	ENSJJAG00000015632	-	99	69.189	Jaculus_jaculus
ENSGACG00000017474	rcl1	99	78.649	ENSJJAG00000022803	-	99	78.649	Jaculus_jaculus
ENSGACG00000017474	rcl1	54	61.881	ENSJJAG00000000764	-	98	61.881	Jaculus_jaculus
ENSGACG00000017474	rcl1	100	90.323	ENSKMAG00000011946	rcl1	100	90.323	Kryptolebias_marmoratus
ENSGACG00000017474	rcl1	100	86.022	ENSLBEG00000003957	rcl1	100	86.022	Labrus_bergylta
ENSGACG00000017474	rcl1	92	74.269	ENSLACG00000004594	RCL1	100	78.261	Latimeria_chalumnae
ENSGACG00000017474	rcl1	100	81.183	ENSLOCG00000010148	rcl1	98	81.183	Lepisosteus_oculatus
ENSGACG00000017474	rcl1	99	77.297	ENSLAFG00000017495	RCL1	99	77.297	Loxodonta_africana
ENSGACG00000017474	rcl1	100	77.540	ENSMFAG00000037906	RCL1	100	77.540	Macaca_fascicularis
ENSGACG00000017474	rcl1	100	77.540	ENSMNEG00000012288	RCL1	100	77.540	Macaca_nemestrina
ENSGACG00000017474	rcl1	100	77.540	ENSMLEG00000043088	RCL1	100	77.540	Mandrillus_leucophaeus
ENSGACG00000017474	rcl1	100	89.516	ENSMAMG00000008311	rcl1	100	89.516	Mastacembelus_armatus
ENSGACG00000017474	rcl1	100	87.366	ENSMZEG00005017292	rcl1	100	87.366	Maylandia_zebra
ENSGACG00000017474	rcl1	58	72.273	ENSMGAG00000002245	RCL1	100	72.273	Meleagris_gallopavo
ENSGACG00000017474	rcl1	58	80.093	ENSMAUG00000008922	Rcl1	100	80.093	Mesocricetus_auratus
ENSGACG00000017474	rcl1	100	77.540	ENSMICG00000015562	RCL1	100	77.540	Microcebus_murinus
ENSGACG00000017474	rcl1	100	77.540	ENSMOCG00000012145	Rcl1	100	77.540	Microtus_ochrogaster
ENSGACG00000017474	rcl1	100	87.668	ENSMMOG00000021264	rcl1	100	87.668	Mola_mola
ENSGACG00000017474	rcl1	95	77.528	ENSMODG00000015377	RCL1	94	77.528	Monodelphis_domestica
ENSGACG00000017474	rcl1	100	89.247	ENSMALG00000018618	rcl1	100	89.247	Monopterus_albus
ENSGACG00000017474	rcl1	100	77.807	MGP_CAROLIEiJ_G0022853	Rcl1	100	77.807	Mus_caroli
ENSGACG00000017474	rcl1	100	77.540	ENSMUSG00000024785	Rcl1	100	77.540	Mus_musculus
ENSGACG00000017474	rcl1	100	78.075	MGP_PahariEiJ_G0014346	Rcl1	100	78.363	Mus_pahari
ENSGACG00000017474	rcl1	100	77.540	MGP_SPRETEiJ_G0023771	Rcl1	100	78.363	Mus_spretus
ENSGACG00000017474	rcl1	100	78.075	ENSMPUG00000004998	RCL1	100	78.075	Mustela_putorius_furo
ENSGACG00000017474	rcl1	100	76.203	ENSMLUG00000009654	RCL1	100	76.203	Myotis_lucifugus
ENSGACG00000017474	rcl1	100	77.807	ENSNGAG00000015327	Rcl1	100	77.807	Nannospalax_galili
ENSGACG00000017474	rcl1	88	87.538	ENSNBRG00000019854	rcl1	99	81.267	Neolamprologus_brichardi
ENSGACG00000017474	rcl1	100	75.401	ENSNLEG00000008891	RCL1	100	75.401	Nomascus_leucogenys
ENSGACG00000017474	rcl1	100	70.856	ENSMEUG00000007653	RCL1	100	70.856	Notamacropus_eugenii
ENSGACG00000017474	rcl1	100	76.203	ENSOPRG00000010965	RCL1	100	76.203	Ochotona_princeps
ENSGACG00000017474	rcl1	88	65.957	ENSODEG00000004151	RCL1	96	65.957	Octodon_degus
ENSGACG00000017474	rcl1	100	88.172	ENSONIG00000003871	rcl1	100	88.172	Oreochromis_niloticus
ENSGACG00000017474	rcl1	67	75.099	ENSOANG00000013193	-	99	75.099	Ornithorhynchus_anatinus
ENSGACG00000017474	rcl1	100	77.005	ENSOCUG00000008161	RCL1	100	77.005	Oryctolagus_cuniculus
ENSGACG00000017474	rcl1	100	86.559	ENSORLG00000010443	rcl1	100	86.559	Oryzias_latipes
ENSGACG00000017474	rcl1	100	86.828	ENSORLG00020012211	rcl1	100	86.828	Oryzias_latipes_hni
ENSGACG00000017474	rcl1	100	86.290	ENSORLG00015001122	rcl1	100	86.290	Oryzias_latipes_hsok
ENSGACG00000017474	rcl1	100	88.441	ENSOMEG00000022976	rcl1	88	88.441	Oryzias_melastigma
ENSGACG00000017474	rcl1	99	77.838	ENSOGAG00000007480	RCL1	99	77.838	Otolemur_garnettii
ENSGACG00000017474	rcl1	100	77.540	ENSOARG00000013463	RCL1	100	77.540	Ovis_aries
ENSGACG00000017474	rcl1	100	77.273	ENSPPAG00000037958	RCL1	100	77.273	Pan_paniscus
ENSGACG00000017474	rcl1	99	77.568	ENSPPRG00000022645	RCL1	99	77.568	Panthera_pardus
ENSGACG00000017474	rcl1	88	79.511	ENSPTIG00000019031	RCL1	100	80.093	Panthera_tigris_altaica
ENSGACG00000017474	rcl1	100	77.005	ENSPTRG00000020743	RCL1	100	77.005	Pan_troglodytes
ENSGACG00000017474	rcl1	100	77.540	ENSPANG00000025151	RCL1	100	77.540	Papio_anubis
ENSGACG00000017474	rcl1	100	80.645	ENSPKIG00000021022	rcl1	100	80.645	Paramormyrops_kingsleyae
ENSGACG00000017474	rcl1	88	76.292	ENSPSIG00000012302	RCL1	100	76.292	Pelodiscus_sinensis
ENSGACG00000017474	rcl1	100	87.097	ENSPMGG00000024007	rcl1	100	87.097	Periophthalmus_magnuspinnatus
ENSGACG00000017474	rcl1	100	77.807	ENSPEMG00000023275	Rcl1	100	77.807	Peromyscus_maniculatus_bairdii
ENSGACG00000017474	rcl1	100	77.005	ENSPCIG00000000188	RCL1	100	77.005	Phascolarctos_cinereus
ENSGACG00000017474	rcl1	100	88.710	ENSPFOG00000019682	rcl1	99	88.710	Poecilia_formosa
ENSGACG00000017474	rcl1	100	88.710	ENSPLAG00000022354	rcl1	100	88.710	Poecilia_latipinna
ENSGACG00000017474	rcl1	100	88.710	ENSPMEG00000008131	rcl1	100	88.710	Poecilia_mexicana
ENSGACG00000017474	rcl1	100	88.172	ENSPREG00000008032	rcl1	100	88.172	Poecilia_reticulata
ENSGACG00000017474	rcl1	100	77.273	ENSPPYG00000019244	RCL1	100	77.273	Pongo_abelii
ENSGACG00000017474	rcl1	99	71.351	ENSPCAG00000001440	RCL1	99	71.351	Procavia_capensis
ENSGACG00000017474	rcl1	100	77.807	ENSPCOG00000009611	RCL1	100	77.807	Propithecus_coquereli
ENSGACG00000017474	rcl1	100	77.273	ENSPVAG00000015752	RCL1	100	77.273	Pteropus_vampyrus
ENSGACG00000017474	rcl1	100	87.366	ENSPNYG00000012910	rcl1	100	87.366	Pundamilia_nyererei
ENSGACG00000017474	rcl1	99	82.337	ENSPNAG00000028307	rcl1	91	82.337	Pygocentrus_nattereri
ENSGACG00000017474	rcl1	100	77.540	ENSRNOG00000015491	Rcl1	100	77.540	Rattus_norvegicus
ENSGACG00000017474	rcl1	100	77.273	ENSRBIG00000035818	RCL1	100	77.273	Rhinopithecus_bieti
ENSGACG00000017474	rcl1	100	77.540	ENSRROG00000029781	RCL1	100	77.540	Rhinopithecus_roxellana
ENSGACG00000017474	rcl1	98	36.585	YOL010W	-	97	36.585	Saccharomyces_cerevisiae
ENSGACG00000017474	rcl1	100	77.540	ENSSBOG00000026369	RCL1	100	77.540	Saimiri_boliviensis_boliviensis
ENSGACG00000017474	rcl1	88	79.027	ENSSHAG00000014086	RCL1	99	79.027	Sarcophilus_harrisii
ENSGACG00000017474	rcl1	100	80.108	ENSSFOG00015023020	rcl1	100	80.108	Scleropages_formosus
ENSGACG00000017474	rcl1	100	90.323	ENSSMAG00000019751	rcl1	86	90.323	Scophthalmus_maximus
ENSGACG00000017474	rcl1	100	90.323	ENSSDUG00000006349	rcl1	100	90.323	Seriola_dumerili
ENSGACG00000017474	rcl1	100	90.323	ENSSLDG00000022076	rcl1	100	90.323	Seriola_lalandi_dorsalis
ENSGACG00000017474	rcl1	100	77.273	ENSSARG00000009260	RCL1	100	77.273	Sorex_araneus
ENSGACG00000017474	rcl1	99	75.946	ENSSPUG00000016330	RCL1	99	75.946	Sphenodon_punctatus
ENSGACG00000017474	rcl1	100	90.323	ENSSPAG00000018038	rcl1	100	90.323	Stegastes_partitus
ENSGACG00000017474	rcl1	100	77.807	ENSSSCG00000005217	RCL1	83	77.807	Sus_scrofa
ENSGACG00000017474	rcl1	99	72.849	ENSTGUG00000005138	RCL1	99	72.849	Taeniopygia_guttata
ENSGACG00000017474	rcl1	100	88.978	ENSTRUG00000010493	rcl1	100	88.978	Takifugu_rubripes
ENSGACG00000017474	rcl1	100	86.828	ENSTNIG00000013214	rcl1	99	86.828	Tetraodon_nigroviridis
ENSGACG00000017474	rcl1	100	72.460	ENSTBEG00000016339	RCL1	100	72.460	Tupaia_belangeri
ENSGACG00000017474	rcl1	100	77.273	ENSTTRG00000016525	RCL1	100	77.273	Tursiops_truncatus
ENSGACG00000017474	rcl1	100	78.610	ENSUAMG00000005598	RCL1	100	80.247	Ursus_americanus
ENSGACG00000017474	rcl1	88	79.878	ENSUMAG00000017890	RCL1	97	79.878	Ursus_maritimus
ENSGACG00000017474	rcl1	88	79.573	ENSVPAG00000009188	RCL1	100	79.573	Vicugna_pacos
ENSGACG00000017474	rcl1	88	81.155	ENSVVUG00000007304	RCL1	89	81.155	Vulpes_vulpes
ENSGACG00000017474	rcl1	100	70.933	ENSXETG00000000592	rcl1	100	70.933	Xenopus_tropicalis
ENSGACG00000017474	rcl1	100	88.978	ENSXCOG00000004922	rcl1	100	88.978	Xiphophorus_couchianus
ENSGACG00000017474	rcl1	100	88.978	ENSXMAG00000022366	RCL1	100	88.978	Xiphophorus_maculatus