EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017544 (Gene tree)
Gene ID: -
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G patch domain containing 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 7926 bases
Position: chrgroupII:22611979-22619904
Accession: ZDB-GENE-040914-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023178	DUF1604	PF07713.13	1.4e-35	1	1
ENSGACP00000023178	G-patch	PF01585.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000023223	-	2685	-	ENSGACP00000023178	895 (aa)	-	G3PZY8

Gene Model

Click here to download ENSGACG00000017544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017544	gpatch1	94	48.840	ENSG00000076650	GPATCH1	75	73.958	Homo_sapiens
ENSGACG00000017544	gpatch1	94	48.789	ENSAMEG00000015575	GPATCH1	81	50.973	Ailuropoda_melanoleuca
ENSGACG00000017544	gpatch1	89	84.865	ENSAOCG00000006668	gpatch1	79	84.865	Amphiprion_ocellaris
ENSGACG00000017544	gpatch1	95	68.080	ENSAPEG00000000026	gpatch1	91	67.922	Amphiprion_percula
ENSGACG00000017544	gpatch1	95	68.946	ENSATEG00000014494	gpatch1	92	68.386	Anabas_testudineus
ENSGACG00000017544	gpatch1	95	45.686	ENSAPLG00000007584	GPATCH1	99	46.018	Anas_platyrhynchos
ENSGACG00000017544	gpatch1	94	49.307	ENSANAG00000027002	GPATCH1	91	49.307	Aotus_nancymaae
ENSGACG00000017544	gpatch1	89	71.360	ENSACLG00000024740	gpatch1	84	71.633	Astatotilapia_calliptera
ENSGACG00000017544	gpatch1	96	52.721	ENSAMXG00000020177	gpatch1	96	54.357	Astyanax_mexicanus
ENSGACG00000017544	gpatch1	94	49.190	ENSBTAG00000000721	GPATCH1	81	51.295	Bos_taurus
ENSGACG00000017544	gpatch1	94	49.307	ENSCJAG00000000684	GPATCH1	91	49.307	Callithrix_jacchus
ENSGACG00000017544	gpatch1	94	48.443	ENSCAFG00000007457	GPATCH1	68	50.841	Canis_familiaris
ENSGACG00000017544	gpatch1	97	47.811	ENSCAFG00020019731	GPATCH1	81	50.777	Canis_lupus_dingo
ENSGACG00000017544	gpatch1	94	50.000	ENSCHIG00000019626	GPATCH1	83	52.399	Capra_hircus
ENSGACG00000017544	gpatch1	81	49.866	ENSCAPG00000008827	GPATCH1	81	50.134	Cavia_aperea
ENSGACG00000017544	gpatch1	84	50.845	ENSCPOG00000024477	GPATCH1	81	50.845	Cavia_porcellus
ENSGACG00000017544	gpatch1	94	49.247	ENSCCAG00000024676	GPATCH1	91	49.247	Cebus_capucinus
ENSGACG00000017544	gpatch1	94	49.243	ENSCATG00000043637	GPATCH1	75	75.000	Cercocebus_atys
ENSGACG00000017544	gpatch1	81	50.607	ENSCLAG00000003395	-	82	50.607	Chinchilla_lanigera
ENSGACG00000017544	gpatch1	94	48.667	ENSCSAG00000004743	GPATCH1	91	48.667	Chlorocebus_sabaeus
ENSGACG00000017544	gpatch1	79	53.917	ENSCHOG00000012865	GPATCH1	74	53.917	Choloepus_hoffmanni
ENSGACG00000017544	gpatch1	82	51.486	ENSCPBG00000000666	GPATCH1	92	51.892	Chrysemys_picta_bellii
ENSGACG00000017544	gpatch1	93	32.834	ENSCING00000012518	-	95	33.642	Ciona_intestinalis
ENSGACG00000017544	gpatch1	84	48.338	ENSCANG00000012540	GPATCH1	89	48.338	Colobus_angolensis_palliatus
ENSGACG00000017544	gpatch1	92	49.882	ENSCGRG00001016736	Gpatch1	92	50.000	Cricetulus_griseus_chok1gshd
ENSGACG00000017544	gpatch1	81	45.047	ENSCGRG00000005069	Gpatch1	77	45.047	Cricetulus_griseus_crigri
ENSGACG00000017544	gpatch1	94	47.141	ENSCSEG00000019456	-	75	86.598	Cynoglossus_semilaevis
ENSGACG00000017544	gpatch1	93	54.194	ENSDARG00000033418	gpatch1	91	55.359	Danio_rerio
ENSGACG00000017544	gpatch1	94	48.443	ENSDNOG00000005291	GPATCH1	94	48.443	Dasypus_novemcinctus
ENSGACG00000017544	gpatch1	97	46.780	ENSDORG00000012546	Gpatch1	94	46.922	Dipodomys_ordii
ENSGACG00000017544	gpatch1	72	32.751	FBgn0036386	CG8833	67	32.946	Drosophila_melanogaster
ENSGACG00000017544	gpatch1	85	52.656	ENSETEG00000003626	GPATCH1	71	52.656	Echinops_telfairi
ENSGACG00000017544	gpatch1	97	37.214	ENSEBUG00000011286	gpatch1	83	39.076	Eptatretus_burgeri
ENSGACG00000017544	gpatch1	93	50.295	ENSEASG00005021162	GPATCH1	88	52.083	Equus_asinus_asinus
ENSGACG00000017544	gpatch1	94	49.710	ENSECAG00000022743	GPATCH1	88	49.593	Equus_caballus
ENSGACG00000017544	gpatch1	69	63.333	ENSEEUG00000012925	GPATCH1	67	63.333	Erinaceus_europaeus
ENSGACG00000017544	gpatch1	93	56.054	ENSELUG00000018195	gpatch1	80	59.398	Esox_lucius
ENSGACG00000017544	gpatch1	93	48.772	ENSFCAG00000014917	GPATCH1	81	50.779	Felis_catus
ENSGACG00000017544	gpatch1	93	48.041	ENSFALG00000007821	GPATCH1	89	48.829	Ficedula_albicollis
ENSGACG00000017544	gpatch1	81	51.678	ENSFDAG00000003871	GPATCH1	90	49.578	Fukomys_damarensis
ENSGACG00000017544	gpatch1	93	52.906	ENSGMOG00000003830	gpatch1	96	52.426	Gadus_morhua
ENSGACG00000017544	gpatch1	96	48.123	ENSGALG00000004839	GPATCH1	92	48.256	Gallus_gallus
ENSGACG00000017544	gpatch1	93	49.527	ENSGAGG00000010067	GPATCH1	89	49.764	Gopherus_agassizii
ENSGACG00000017544	gpatch1	92	48.206	ENSGGOG00000010862	GPATCH1	91	48.206	Gorilla_gorilla
ENSGACG00000017544	gpatch1	95	68.339	ENSHBUG00000023462	gpatch1	92	69.188	Haplochromis_burtoni
ENSGACG00000017544	gpatch1	93	49.824	ENSHGLG00000009334	GPATCH1	81	51.358	Heterocephalus_glaber_female
ENSGACG00000017544	gpatch1	93	49.706	ENSHGLG00100018074	GPATCH1	81	51.229	Heterocephalus_glaber_male
ENSGACG00000017544	gpatch1	97	55.905	ENSIPUG00000014977	gpatch1	91	56.841	Ictalurus_punctatus
ENSGACG00000017544	gpatch1	94	48.621	ENSSTOG00000003720	GPATCH1	91	48.840	Ictidomys_tridecemlineatus
ENSGACG00000017544	gpatch1	94	49.711	ENSJJAG00000023765	Gpatch1	91	48.845	Jaculus_jaculus
ENSGACG00000017544	gpatch1	95	65.306	ENSKMAG00000017950	gpatch1	90	66.782	Kryptolebias_marmoratus
ENSGACG00000017544	gpatch1	96	66.849	ENSLBEG00000026527	gpatch1	90	69.604	Labrus_bergylta
ENSGACG00000017544	gpatch1	91	51.270	ENSLACG00000008130	GPATCH1	89	51.497	Latimeria_chalumnae
ENSGACG00000017544	gpatch1	84	57.345	ENSLOCG00000001800	gpatch1	89	54.186	Lepisosteus_oculatus
ENSGACG00000017544	gpatch1	94	49.479	ENSLAFG00000013589	GPATCH1	86	51.621	Loxodonta_africana
ENSGACG00000017544	gpatch1	94	49.416	ENSMFAG00000034418	GPATCH1	75	75.000	Macaca_fascicularis
ENSGACG00000017544	gpatch1	94	49.131	ENSMMUG00000011790	GPATCH1	75	76.042	Macaca_mulatta
ENSGACG00000017544	gpatch1	94	49.186	ENSMNEG00000045084	GPATCH1	75	72.917	Macaca_nemestrina
ENSGACG00000017544	gpatch1	94	42.375	ENSMLEG00000043840	GPATCH1	90	42.375	Mandrillus_leucophaeus
ENSGACG00000017544	gpatch1	89	71.239	ENSMZEG00005001926	gpatch1	87	70.198	Maylandia_zebra
ENSGACG00000017544	gpatch1	93	49.408	ENSMGAG00000005775	GPATCH1	89	48.488	Meleagris_gallopavo
ENSGACG00000017544	gpatch1	93	44.678	ENSMICG00000004829	GPATCH1	83	46.503	Microcebus_murinus
ENSGACG00000017544	gpatch1	94	49.309	ENSMOCG00000000174	Gpatch1	82	52.332	Microtus_ochrogaster
ENSGACG00000017544	gpatch1	89	66.264	ENSMMOG00000002140	gpatch1	88	67.766	Mola_mola
ENSGACG00000017544	gpatch1	93	48.436	ENSMODG00000012226	GPATCH1	89	48.276	Monodelphis_domestica
ENSGACG00000017544	gpatch1	95	69.118	ENSMALG00000014386	gpatch1	92	68.891	Monopterus_albus
ENSGACG00000017544	gpatch1	96	49.829	ENSMUSG00000063808	Gpatch1	98	72.917	Mus_musculus
ENSGACG00000017544	gpatch1	96	49.601	MGP_PahariEiJ_G0012816	Gpatch1	98	73.958	Mus_pahari
ENSGACG00000017544	gpatch1	96	49.943	MGP_SPRETEiJ_G0030681	Gpatch1	98	73.958	Mus_spretus
ENSGACG00000017544	gpatch1	94	48.966	ENSMPUG00000007658	GPATCH1	91	48.851	Mustela_putorius_furo
ENSGACG00000017544	gpatch1	94	48.958	ENSMLUG00000012161	GPATCH1	91	48.843	Myotis_lucifugus
ENSGACG00000017544	gpatch1	95	49.133	ENSNGAG00000012455	Gpatch1	91	47.931	Nannospalax_galili
ENSGACG00000017544	gpatch1	94	49.072	ENSNLEG00000007659	GPATCH1	75	73.958	Nomascus_leucogenys
ENSGACG00000017544	gpatch1	79	45.631	ENSMEUG00000015174	GPATCH1	76	45.770	Notamacropus_eugenii
ENSGACG00000017544	gpatch1	84	50.779	ENSODEG00000007103	GPATCH1	81	51.369	Octodon_degus
ENSGACG00000017544	gpatch1	93	70.175	ENSONIG00000003302	gpatch1	92	70.175	Oreochromis_niloticus
ENSGACG00000017544	gpatch1	93	50.588	ENSOANG00000012732	GPATCH1	89	50.353	Ornithorhynchus_anatinus
ENSGACG00000017544	gpatch1	93	50.587	ENSOCUG00000015905	GPATCH1	90	50.235	Oryctolagus_cuniculus
ENSGACG00000017544	gpatch1	93	64.830	ENSORLG00000018706	gpatch1	88	64.561	Oryzias_latipes
ENSGACG00000017544	gpatch1	93	65.658	ENSOMEG00000022688	gpatch1	90	65.851	Oryzias_melastigma
ENSGACG00000017544	gpatch1	87	50.314	ENSOGAG00000004016	GPATCH1	96	50.904	Otolemur_garnettii
ENSGACG00000017544	gpatch1	94	49.709	ENSOARG00000004365	GPATCH1	81	51.760	Ovis_aries
ENSGACG00000017544	gpatch1	94	48.492	ENSPPAG00000020990	GPATCH1	75	73.196	Pan_paniscus
ENSGACG00000017544	gpatch1	94	47.766	ENSPPRG00000017245	GPATCH1	81	50.518	Panthera_pardus
ENSGACG00000017544	gpatch1	94	48.454	ENSPTIG00000019649	GPATCH1	81	51.295	Panthera_tigris_altaica
ENSGACG00000017544	gpatch1	94	48.492	ENSPTRG00000010803	GPATCH1	75	73.958	Pan_troglodytes
ENSGACG00000017544	gpatch1	94	49.243	ENSPANG00000012374	GPATCH1	75	75.000	Papio_anubis
ENSGACG00000017544	gpatch1	84	57.161	ENSPKIG00000020745	gpatch1	77	57.417	Paramormyrops_kingsleyae
ENSGACG00000017544	gpatch1	84	52.652	ENSPSIG00000013433	GPATCH1	81	53.003	Pelodiscus_sinensis
ENSGACG00000017544	gpatch1	94	49.884	ENSPEMG00000000636	Gpatch1	91	49.885	Peromyscus_maniculatus_bairdii
ENSGACG00000017544	gpatch1	93	49.767	ENSPCIG00000021003	GPATCH1	94	49.767	Phascolarctos_cinereus
ENSGACG00000017544	gpatch1	73	63.086	ENSPREG00000008264	gpatch1	80	63.086	Poecilia_reticulata
ENSGACG00000017544	gpatch1	94	47.448	ENSPPYG00000009824	GPATCH1	91	47.448	Pongo_abelii
ENSGACG00000017544	gpatch1	85	44.444	ENSPCAG00000005931	GPATCH1	73	46.547	Procavia_capensis
ENSGACG00000017544	gpatch1	95	46.843	ENSPCOG00000009674	GPATCH1	87	49.935	Propithecus_coquereli
ENSGACG00000017544	gpatch1	79	50.487	ENSPVAG00000017767	GPATCH1	76	50.487	Pteropus_vampyrus
ENSGACG00000017544	gpatch1	89	72.000	ENSPNYG00000018189	gpatch1	96	70.000	Pundamilia_nyererei
ENSGACG00000017544	gpatch1	94	54.635	ENSPNAG00000013187	gpatch1	92	54.089	Pygocentrus_nattereri
ENSGACG00000017544	gpatch1	96	49.773	ENSRNOG00000011584	Gpatch1	81	51.995	Rattus_norvegicus
ENSGACG00000017544	gpatch1	93	44.235	ENSRBIG00000034723	GPATCH1	91	44.235	Rhinopithecus_bieti
ENSGACG00000017544	gpatch1	94	48.899	ENSRROG00000024428	GPATCH1	75	73.958	Rhinopithecus_roxellana
ENSGACG00000017544	gpatch1	94	49.072	ENSSBOG00000034650	GPATCH1	91	49.072	Saimiri_boliviensis_boliviensis
ENSGACG00000017544	gpatch1	93	48.889	ENSSHAG00000016016	GPATCH1	90	47.664	Sarcophilus_harrisii
ENSGACG00000017544	gpatch1	99	54.486	ENSSFOG00015011535	gpatch1	95	53.182	Scleropages_formosus
ENSGACG00000017544	gpatch1	95	77.447	ENSSMAG00000002883	gpatch1	90	78.298	Scophthalmus_maximus
ENSGACG00000017544	gpatch1	96	68.043	ENSSDUG00000007444	gpatch1	91	70.154	Seriola_dumerili
ENSGACG00000017544	gpatch1	85	72.506	ENSSLDG00000002856	gpatch1	96	71.577	Seriola_lalandi_dorsalis
ENSGACG00000017544	gpatch1	73	54.173	ENSSARG00000004108	GPATCH1	70	54.173	Sorex_araneus
ENSGACG00000017544	gpatch1	94	49.826	ENSSSCG00000002865	GPATCH1	92	50.236	Sus_scrofa
ENSGACG00000017544	gpatch1	93	50.000	ENSTGUG00000009401	GPATCH1	90	49.008	Taeniopygia_guttata
ENSGACG00000017544	gpatch1	84	68.898	ENSTRUG00000025081	gpatch1	89	64.353	Takifugu_rubripes
ENSGACG00000017544	gpatch1	84	68.898	ENSTRUG00000005785	-	89	64.353	Takifugu_rubripes
ENSGACG00000017544	gpatch1	84	67.890	ENSTNIG00000002554	gpatch1	97	66.624	Tetraodon_nigroviridis
ENSGACG00000017544	gpatch1	63	48.864	ENSTBEG00000007750	-	80	48.864	Tupaia_belangeri
ENSGACG00000017544	gpatch1	89	57.143	ENSTTRG00000012221	GPATCH1	86	57.143	Tursiops_truncatus
ENSGACG00000017544	gpatch1	94	48.958	ENSUMAG00000014645	GPATCH1	77	73.958	Ursus_maritimus
ENSGACG00000017544	gpatch1	81	64.162	ENSVPAG00000010313	GPATCH1	84	63.889	Vicugna_pacos
ENSGACG00000017544	gpatch1	97	47.924	ENSVVUG00000016572	GPATCH1	81	50.907	Vulpes_vulpes
ENSGACG00000017544	gpatch1	87	43.960	ENSXETG00000018276	gpatch1	99	44.085	Xenopus_tropicalis