EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017566 (Gene tree)
Gene ID: -
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2332 bases
Position: chrgroupXIV:8181302-8183633
Accession: ZDB-GENE-041212-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023217	PseudoU_synth_1	PF01416.20	3.7e-16	1	1
ENSGACP00000023222	PseudoU_synth_1	PF01416.20	4.6e-16	1	1
ENSGACP00000023226	PseudoU_synth_1	PF01416.20	5.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000023262	-	1920	-	ENSGACP00000023217	392 (aa)	-	G3Q027
ENSGACT00000023271	-	972	-	ENSGACP00000023226	323 (aa)	-	G3Q036
ENSGACT00000023267	-	1568	-	ENSGACP00000023222	421 (aa)	-	G3Q032

Gene Model

Click here to download ENSGACG00000017566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017566	pus1	88	69.364	ENSG00000177192	PUS1	90	69.364	Homo_sapiens
ENSGACG00000017566	pus1	100	82.741	ENSAPOG00000007254	pus1	100	81.324	Acanthochromis_polyacanthus
ENSGACG00000017566	pus1	91	67.887	ENSAMEG00000013715	PUS1	86	67.887	Ailuropoda_melanoleuca
ENSGACG00000017566	pus1	100	81.980	ENSACIG00000009169	pus1	94	81.980	Amphilophus_citrinellus
ENSGACG00000017566	pus1	100	83.503	ENSAOCG00000022207	pus1	100	82.033	Amphiprion_ocellaris
ENSGACG00000017566	pus1	100	83.503	ENSAPEG00000006039	pus1	100	83.503	Amphiprion_percula
ENSGACG00000017566	pus1	99	83.206	ENSATEG00000020688	pus1	100	83.206	Anabas_testudineus
ENSGACG00000017566	pus1	90	67.416	ENSACAG00000007367	PUS1	95	67.416	Anolis_carolinensis
ENSGACG00000017566	pus1	87	65.248	ENSANAG00000036192	PUS1	95	69.551	Aotus_nancymaae
ENSGACG00000017566	pus1	99	82.188	ENSACLG00000020868	pus1	100	82.188	Astatotilapia_calliptera
ENSGACG00000017566	pus1	100	71.939	ENSAMXG00000008710	pus1	89	71.939	Astyanax_mexicanus
ENSGACG00000017566	pus1	94	66.216	ENSBTAG00000012990	PUS1	92	66.216	Bos_taurus
ENSGACG00000017566	pus1	90	35.530	WBGene00004248	pus-1	83	39.205	Caenorhabditis_elegans
ENSGACG00000017566	pus1	90	63.014	ENSCJAG00000003720	PUS1	81	61.967	Callithrix_jacchus
ENSGACG00000017566	pus1	90	67.797	ENSCAFG00000006429	PUS1	88	67.797	Canis_familiaris
ENSGACG00000017566	pus1	90	67.797	ENSCAFG00020010737	PUS1	81	67.797	Canis_lupus_dingo
ENSGACG00000017566	pus1	94	66.216	ENSCHIG00000000487	PUS1	92	66.216	Capra_hircus
ENSGACG00000017566	pus1	100	57.297	ENSTSYG00000032605	PUS1	99	67.027	Carlito_syrichta
ENSGACG00000017566	pus1	79	69.685	ENSCAPG00000006421	PUS1	100	68.111	Cavia_aperea
ENSGACG00000017566	pus1	94	65.135	ENSCPOG00000001027	PUS1	88	65.902	Cavia_porcellus
ENSGACG00000017566	pus1	100	56.216	ENSCCAG00000015879	PUS1	87	68.790	Cebus_capucinus
ENSGACG00000017566	pus1	88	68.497	ENSCATG00000032870	PUS1	94	61.787	Cercocebus_atys
ENSGACG00000017566	pus1	94	65.405	ENSCLAG00000011689	PUS1	88	66.557	Chinchilla_lanigera
ENSGACG00000017566	pus1	91	67.324	ENSCSAG00000001879	PUS1	96	60.680	Chlorocebus_sabaeus
ENSGACG00000017566	pus1	82	68.679	ENSCPBG00000024715	PUS1	89	70.159	Chrysemys_picta_bellii
ENSGACG00000017566	pus1	88	44.798	ENSCING00000009426	-	92	44.798	Ciona_intestinalis
ENSGACG00000017566	pus1	96	40.360	ENSCSAVG00000003751	-	78	40.360	Ciona_savignyi
ENSGACG00000017566	pus1	100	56.119	ENSCANG00000035561	PUS1	86	63.091	Colobus_angolensis_palliatus
ENSGACG00000017566	pus1	65	30.175	ENSCGRG00001019842	Pus3	54	30.175	Cricetulus_griseus_chok1gshd
ENSGACG00000017566	pus1	95	65.916	ENSCGRG00001019592	Pus1	89	65.916	Cricetulus_griseus_chok1gshd
ENSGACG00000017566	pus1	95	65.916	ENSCGRG00000004048	Pus1	89	65.916	Cricetulus_griseus_crigri
ENSGACG00000017566	pus1	65	30.175	ENSCGRG00000010155	Pus3	54	30.175	Cricetulus_griseus_crigri
ENSGACG00000017566	pus1	99	76.336	ENSCSEG00000003629	pus1	100	73.995	Cynoglossus_semilaevis
ENSGACG00000017566	pus1	99	82.353	ENSCVAG00000001265	pus1	100	80.998	Cyprinodon_variegatus
ENSGACG00000017566	pus1	98	68.653	ENSDARG00000045562	pus1	97	74.088	Danio_rerio
ENSGACG00000017566	pus1	89	67.816	ENSDNOG00000045576	PUS1	94	71.010	Dasypus_novemcinctus
ENSGACG00000017566	pus1	87	66.667	ENSDORG00000011455	Pus1	95	70.192	Dipodomys_ordii
ENSGACG00000017566	pus1	93	41.834	FBgn0038811	PUS1	84	46.286	Drosophila_melanogaster
ENSGACG00000017566	pus1	89	68.768	ENSETEG00000019160	PUS1	87	67.680	Echinops_telfairi
ENSGACG00000017566	pus1	94	36.559	ENSEBUG00000000368	-	69	43.700	Eptatretus_burgeri
ENSGACG00000017566	pus1	89	68.571	ENSEASG00005016535	PUS1	81	68.571	Equus_asinus_asinus
ENSGACG00000017566	pus1	89	68.571	ENSECAG00000006965	PUS1	88	68.571	Equus_caballus
ENSGACG00000017566	pus1	55	30.964	ENSELUG00000015945	pusl1	66	30.964	Esox_lucius
ENSGACG00000017566	pus1	100	73.165	ENSELUG00000010424	pus1	99	73.165	Esox_lucius
ENSGACG00000017566	pus1	94	65.761	ENSFCAG00000010780	PUS1	86	65.761	Felis_catus
ENSGACG00000017566	pus1	93	66.667	ENSFALG00000008273	PUS1	86	66.667	Ficedula_albicollis
ENSGACG00000017566	pus1	94	66.304	ENSFDAG00000012518	PUS1	90	66.304	Fukomys_damarensis
ENSGACG00000017566	pus1	100	82.653	ENSFHEG00000010504	pus1	100	80.523	Fundulus_heteroclitus
ENSGACG00000017566	pus1	96	79.576	ENSGMOG00000008143	pus1	99	77.608	Gadus_morhua
ENSGACG00000017566	pus1	93	67.857	ENSGALG00000002354	PUS1	89	67.857	Gallus_gallus
ENSGACG00000017566	pus1	99	84.143	ENSGAFG00000006578	pus1	100	81.948	Gambusia_affinis
ENSGACG00000017566	pus1	87	65.125	ENSGAGG00000016730	-	94	67.372	Gopherus_agassizii
ENSGACG00000017566	pus1	88	69.653	ENSGGOG00000009178	PUS1	81	71.475	Gorilla_gorilla
ENSGACG00000017566	pus1	99	82.697	ENSHBUG00000001316	pus1	100	82.697	Haplochromis_burtoni
ENSGACG00000017566	pus1	94	64.918	ENSHGLG00000016086	PUS1	94	63.686	Heterocephalus_glaber_female
ENSGACG00000017566	pus1	94	64.590	ENSHGLG00100019362	PUS1	94	63.415	Heterocephalus_glaber_male
ENSGACG00000017566	pus1	99	78.005	ENSHCOG00000014288	pus1	96	74.822	Hippocampus_comes
ENSGACG00000017566	pus1	96	75.132	ENSIPUG00000010387	pus1	100	68.287	Ictalurus_punctatus
ENSGACG00000017566	pus1	91	67.887	ENSSTOG00000011245	PUS1	83	67.887	Ictidomys_tridecemlineatus
ENSGACG00000017566	pus1	100	64.198	ENSJJAG00000000088	Pus1	93	64.198	Jaculus_jaculus
ENSGACG00000017566	pus1	97	77.953	ENSKMAG00000012702	pus1	100	73.286	Kryptolebias_marmoratus
ENSGACG00000017566	pus1	99	81.218	ENSLBEG00000002845	pus1	97	80.856	Labrus_bergylta
ENSGACG00000017566	pus1	92	66.667	ENSLACG00000018598	PUS1	95	64.567	Latimeria_chalumnae
ENSGACG00000017566	pus1	82	56.832	ENSLACG00000016044	-	97	56.832	Latimeria_chalumnae
ENSGACG00000017566	pus1	98	68.394	ENSLOCG00000006127	pus1	97	68.394	Lepisosteus_oculatus
ENSGACG00000017566	pus1	91	67.598	ENSLAFG00000028731	PUS1	95	67.598	Loxodonta_africana
ENSGACG00000017566	pus1	88	68.481	ENSMFAG00000041194	PUS1	86	68.481	Macaca_fascicularis
ENSGACG00000017566	pus1	88	68.786	ENSMMUG00000031463	PUS1	87	71.148	Macaca_mulatta
ENSGACG00000017566	pus1	88	68.786	ENSMNEG00000002814	PUS1	94	62.035	Macaca_nemestrina
ENSGACG00000017566	pus1	87	65.603	ENSMLEG00000043560	PUS1	93	71.287	Mandrillus_leucophaeus
ENSGACG00000017566	pus1	100	82.234	ENSMAMG00000007371	pus1	100	80.615	Mastacembelus_armatus
ENSGACG00000017566	pus1	99	82.443	ENSMZEG00005017746	pus1	100	80.142	Maylandia_zebra
ENSGACG00000017566	pus1	87	68.794	ENSMGAG00000001958	PUS1	98	70.769	Meleagris_gallopavo
ENSGACG00000017566	pus1	100	64.198	ENSMAUG00000001482	Pus1	93	64.198	Mesocricetus_auratus
ENSGACG00000017566	pus1	92	66.575	ENSMICG00000030980	PUS1	88	66.575	Microcebus_murinus
ENSGACG00000017566	pus1	95	65.798	ENSMOCG00000022311	Pus1	88	65.798	Microtus_ochrogaster
ENSGACG00000017566	pus1	99	77.320	ENSMMOG00000021022	pus1	99	77.320	Mola_mola
ENSGACG00000017566	pus1	82	69.470	ENSMODG00000015551	PUS1	77	68.023	Monodelphis_domestica
ENSGACG00000017566	pus1	99	80.407	ENSMALG00000013202	pus1	99	78.436	Monopterus_albus
ENSGACG00000017566	pus1	60	30.682	MGP_CAROLIEiJ_G0031957	Pus3	76	30.682	Mus_caroli
ENSGACG00000017566	pus1	100	63.889	MGP_CAROLIEiJ_G0027551	Pus1	93	63.889	Mus_caroli
ENSGACG00000017566	pus1	60	30.258	ENSMUSG00000032103	Pus3	76	30.258	Mus_musculus
ENSGACG00000017566	pus1	100	63.889	ENSMUSG00000029507	Pus1	93	63.889	Mus_musculus
ENSGACG00000017566	pus1	99	64.486	MGP_PahariEiJ_G0024133	Pus1	92	64.486	Mus_pahari
ENSGACG00000017566	pus1	100	63.889	MGP_SPRETEiJ_G0028549	Pus1	93	63.889	Mus_spretus
ENSGACG00000017566	pus1	91	66.854	ENSMPUG00000002314	PUS1	90	66.854	Mustela_putorius_furo
ENSGACG00000017566	pus1	93	65.659	ENSMLUG00000015790	PUS1	99	65.659	Myotis_lucifugus
ENSGACG00000017566	pus1	98	65.615	ENSNGAG00000012976	Pus1	91	65.615	Nannospalax_galili
ENSGACG00000017566	pus1	99	82.188	ENSNBRG00000020502	pus1	99	83.245	Neolamprologus_brichardi
ENSGACG00000017566	pus1	100	57.618	ENSNLEG00000008505	PUS1	92	71.429	Nomascus_leucogenys
ENSGACG00000017566	pus1	83	63.303	ENSMEUG00000002825	PUS1	89	63.303	Notamacropus_eugenii
ENSGACG00000017566	pus1	89	60.632	ENSOPRG00000002701	-	91	60.632	Ochotona_princeps
ENSGACG00000017566	pus1	94	66.997	ENSODEG00000008248	PUS1	92	68.195	Octodon_degus
ENSGACG00000017566	pus1	99	81.658	ENSONIG00000003803	pus1	99	81.658	Oreochromis_niloticus
ENSGACG00000017566	pus1	90	67.697	ENSOANG00000010619	PUS1	81	67.697	Ornithorhynchus_anatinus
ENSGACG00000017566	pus1	92	66.944	ENSOCUG00000007310	PUS1	80	66.396	Oryctolagus_cuniculus
ENSGACG00000017566	pus1	100	79.847	ENSORLG00000010787	pus1	100	76.777	Oryzias_latipes
ENSGACG00000017566	pus1	100	79.592	ENSORLG00020011483	pus1	100	76.540	Oryzias_latipes_hni
ENSGACG00000017566	pus1	100	79.337	ENSORLG00015023012	pus1	100	79.337	Oryzias_latipes_hsok
ENSGACG00000017566	pus1	97	79.683	ENSOMEG00000022655	pus1	96	77.017	Oryzias_melastigma
ENSGACG00000017566	pus1	100	57.182	ENSOGAG00000008720	PUS1	95	66.667	Otolemur_garnettii
ENSGACG00000017566	pus1	94	65.946	ENSOARG00000013316	PUS1	85	65.946	Ovis_aries
ENSGACG00000017566	pus1	88	69.653	ENSPPAG00000040971	PUS1	94	62.531	Pan_paniscus
ENSGACG00000017566	pus1	94	65.395	ENSPPRG00000015456	PUS1	93	65.395	Panthera_pardus
ENSGACG00000017566	pus1	88	67.930	ENSPTIG00000004201	PUS1	90	67.908	Panthera_tigris_altaica
ENSGACG00000017566	pus1	88	69.565	ENSPTRG00000005643	PUS1	94	62.189	Pan_troglodytes
ENSGACG00000017566	pus1	88	68.696	ENSPANG00000000376	PUS1	94	61.940	Papio_anubis
ENSGACG00000017566	pus1	96	65.365	ENSPKIG00000019369	pus1	88	64.781	Paramormyrops_kingsleyae
ENSGACG00000017566	pus1	63	30.108	ENSPSIG00000013961	PUS3	51	30.108	Pelodiscus_sinensis
ENSGACG00000017566	pus1	93	67.391	ENSPSIG00000016432	PUS1	90	65.375	Pelodiscus_sinensis
ENSGACG00000017566	pus1	96	76.862	ENSPMGG00000004522	pus1	97	76.862	Periophthalmus_magnuspinnatus
ENSGACG00000017566	pus1	65	30.070	ENSPEMG00000009602	Pus3	54	30.070	Peromyscus_maniculatus_bairdii
ENSGACG00000017566	pus1	100	63.889	ENSPEMG00000013448	Pus1	93	63.889	Peromyscus_maniculatus_bairdii
ENSGACG00000017566	pus1	84	61.585	ENSPMAG00000004636	pus1	99	61.585	Petromyzon_marinus
ENSGACG00000017566	pus1	79	68.504	ENSPCIG00000022609	-	75	58.307	Phascolarctos_cinereus
ENSGACG00000017566	pus1	99	83.632	ENSPFOG00000019669	pus1	100	81.948	Poecilia_formosa
ENSGACG00000017566	pus1	99	83.376	ENSPLAG00000002692	-	100	81.710	Poecilia_latipinna
ENSGACG00000017566	pus1	99	83.376	ENSPLAG00000007185	pus1	100	81.710	Poecilia_latipinna
ENSGACG00000017566	pus1	99	83.376	ENSPMEG00000011115	PUS1	100	81.710	Poecilia_mexicana
ENSGACG00000017566	pus1	99	83.376	ENSPMEG00000006038	pus1	98	83.291	Poecilia_mexicana
ENSGACG00000017566	pus1	99	82.864	ENSPREG00000007231	pus1	99	83.657	Poecilia_reticulata
ENSGACG00000017566	pus1	88	68.986	ENSPPYG00000005132	PUS1	94	62.657	Pongo_abelii
ENSGACG00000017566	pus1	79	67.578	ENSPCAG00000009110	-	62	67.578	Procavia_capensis
ENSGACG00000017566	pus1	93	59.164	ENSPCOG00000015595	PUS1	91	58.760	Propithecus_coquereli
ENSGACG00000017566	pus1	99	82.443	ENSPNYG00000013571	pus1	100	80.142	Pundamilia_nyererei
ENSGACG00000017566	pus1	98	72.539	ENSPNAG00000003938	pus1	91	72.539	Pygocentrus_nattereri
ENSGACG00000017566	pus1	91	67.042	ENSRNOG00000037500	Pus1	83	67.042	Rattus_norvegicus
ENSGACG00000017566	pus1	88	69.075	ENSRBIG00000043177	PUS1	85	71.475	Rhinopithecus_bieti
ENSGACG00000017566	pus1	88	69.075	ENSRROG00000039744	PUS1	82	71.886	Rhinopithecus_roxellana
ENSGACG00000017566	pus1	93	34.328	YPL212C	-	66	40.741	Saccharomyces_cerevisiae
ENSGACG00000017566	pus1	94	65.405	ENSSBOG00000023593	PUS1	92	65.405	Saimiri_boliviensis_boliviensis
ENSGACG00000017566	pus1	90	67.422	ENSSHAG00000013193	PUS1	86	67.422	Sarcophilus_harrisii
ENSGACG00000017566	pus1	95	67.989	ENSSFOG00015003463	pus1	90	66.176	Scleropages_formosus
ENSGACG00000017566	pus1	99	81.679	ENSSMAG00000019075	pus1	100	78.960	Scophthalmus_maximus
ENSGACG00000017566	pus1	99	84.478	ENSSDUG00000007102	pus1	100	81.087	Seriola_dumerili
ENSGACG00000017566	pus1	99	83.969	ENSSLDG00000022850	pus1	100	80.615	Seriola_lalandi_dorsalis
ENSGACG00000017566	pus1	78	62.295	ENSSARG00000008367	PUS1	98	62.295	Sorex_araneus
ENSGACG00000017566	pus1	97	64.858	ENSSPUG00000010009	PUS1	97	64.858	Sphenodon_punctatus
ENSGACG00000017566	pus1	100	83.756	ENSSPAG00000006272	pus1	100	83.756	Stegastes_partitus
ENSGACG00000017566	pus1	94	65.946	ENSSSCG00000009741	PUS1	86	69.075	Sus_scrofa
ENSGACG00000017566	pus1	84	71.601	ENSTGUG00000008068	PUS1	100	71.601	Taeniopygia_guttata
ENSGACG00000017566	pus1	96	76.923	ENSTRUG00000002198	pus1	94	76.738	Takifugu_rubripes
ENSGACG00000017566	pus1	96	73.316	ENSTNIG00000003942	pus1	97	74.093	Tetraodon_nigroviridis
ENSGACG00000017566	pus1	94	65.583	ENSTTRG00000000632	PUS1	87	65.583	Tursiops_truncatus
ENSGACG00000017566	pus1	91	67.887	ENSUAMG00000017197	PUS1	90	67.887	Ursus_americanus
ENSGACG00000017566	pus1	91	67.324	ENSUMAG00000002831	PUS1	97	69.753	Ursus_maritimus
ENSGACG00000017566	pus1	65	30.345	ENSVPAG00000001495	PUS3	54	30.345	Vicugna_pacos
ENSGACG00000017566	pus1	50	70.588	ENSVPAG00000009778	-	62	70.588	Vicugna_pacos
ENSGACG00000017566	pus1	88	69.364	ENSVVUG00000004199	PUS1	79	69.364	Vulpes_vulpes
ENSGACG00000017566	pus1	81	49.375	ENSXETG00000033640	-	99	49.375	Xenopus_tropicalis
ENSGACG00000017566	pus1	93	66.120	ENSXETG00000002030	pus1	90	66.120	Xenopus_tropicalis
ENSGACG00000017566	pus1	99	84.910	ENSXCOG00000004722	pus1	98	85.526	Xiphophorus_couchianus
ENSGACG00000017566	pus1	99	84.655	ENSXMAG00000000988	pus1	100	82.660	Xiphophorus_maculatus