EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017630 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-217k17.7
Alias: im:7155625
Full Name: si:ch211-217k17.7
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 1927 bases
Position: chrgroupIX:8547800-8549726
Accession: ZDB-GENE-061009-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023295	Cgr1	PF03879.14	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000023341	-	828	-	ENSGACP00000023295	230 (aa)	-	G3Q0A5

Gene Model

Click here to download ENSGACG00000017630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017630's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017630	si:ch211-217k17.7	51	60.684	ENSG00000110104	CCDC86	90	55.319	Homo_sapiens
ENSGACG00000017630	si:ch211-217k17.7	95	63.445	ENSAPOG00000010968	si:ch211-217k17.7	83	64.919	Acanthochromis_polyacanthus
ENSGACG00000017630	si:ch211-217k17.7	99	57.937	ENSACIG00000020679	si:ch211-217k17.7	73	57.937	Amphilophus_citrinellus
ENSGACG00000017630	si:ch211-217k17.7	99	63.563	ENSAOCG00000006303	si:ch211-217k17.7	83	63.563	Amphiprion_ocellaris
ENSGACG00000017630	si:ch211-217k17.7	99	63.968	ENSAPEG00000015364	si:ch211-217k17.7	83	63.968	Amphiprion_percula
ENSGACG00000017630	si:ch211-217k17.7	99	67.811	ENSATEG00000016386	si:ch211-217k17.7	82	67.811	Anabas_testudineus
ENSGACG00000017630	si:ch211-217k17.7	65	52.632	ENSACAG00000017814	CCDC86	92	52.632	Anolis_carolinensis
ENSGACG00000017630	si:ch211-217k17.7	51	76.068	ENSAMXG00000037666	si:ch211-217k17.7	54	76.068	Astyanax_mexicanus
ENSGACG00000017630	si:ch211-217k17.7	82	46.009	ENSBTAG00000014215	CCDC86	60	45.909	Bos_taurus
ENSGACG00000017630	si:ch211-217k17.7	85	45.455	ENSCHIG00000014465	CCDC86	60	45.455	Capra_hircus
ENSGACG00000017630	si:ch211-217k17.7	99	62.447	ENSCSEG00000002637	si:ch211-217k17.7	81	62.447	Cynoglossus_semilaevis
ENSGACG00000017630	si:ch211-217k17.7	99	57.831	ENSCVAG00000003135	si:ch211-217k17.7	84	57.831	Cyprinodon_variegatus
ENSGACG00000017630	si:ch211-217k17.7	99	49.802	ENSDARG00000059908	si:ch211-217k17.7	84	50.417	Danio_rerio
ENSGACG00000017630	si:ch211-217k17.7	99	53.696	ENSELUG00000022687	si:ch211-217k17.7	84	51.362	Esox_lucius
ENSGACG00000017630	si:ch211-217k17.7	99	55.230	ENSGMOG00000016242	-	84	54.812	Gadus_morhua
ENSGACG00000017630	si:ch211-217k17.7	99	58.871	ENSGAFG00000005681	si:ch211-217k17.7	84	60.081	Gambusia_affinis
ENSGACG00000017630	si:ch211-217k17.7	99	60.163	ENSHBUG00000010352	si:ch211-217k17.7	82	61.134	Haplochromis_burtoni
ENSGACG00000017630	si:ch211-217k17.7	51	55.556	ENSHGLG00100010685	CCDC86	81	40.816	Heterocephalus_glaber_male
ENSGACG00000017630	si:ch211-217k17.7	99	60.729	ENSKMAG00000000919	si:ch211-217k17.7	83	63.710	Kryptolebias_marmoratus
ENSGACG00000017630	si:ch211-217k17.7	99	67.686	ENSLBEG00000020547	-	79	67.686	Labrus_bergylta
ENSGACG00000017630	si:ch211-217k17.7	99	62.698	ENSMAMG00000016395	si:ch211-217k17.7	84	62.698	Mastacembelus_armatus
ENSGACG00000017630	si:ch211-217k17.7	99	60.163	ENSMZEG00005019822	si:ch211-217k17.7	82	61.134	Maylandia_zebra
ENSGACG00000017630	si:ch211-217k17.7	99	68.534	ENSMMOG00000006446	si:ch211-217k17.7	82	68.534	Mola_mola
ENSGACG00000017630	si:ch211-217k17.7	99	58.515	ENSNBRG00000013330	-	78	76.596	Neolamprologus_brichardi
ENSGACG00000017630	si:ch211-217k17.7	99	63.830	ENSONIG00000017568	si:ch211-217k17.7	82	63.830	Oreochromis_niloticus
ENSGACG00000017630	si:ch211-217k17.7	98	60.744	ENSORLG00000006331	-	85	60.000	Oryzias_latipes
ENSGACG00000017630	si:ch211-217k17.7	98	60.581	ENSORLG00020021345	si:ch211-217k17.7	85	60.251	Oryzias_latipes_hni
ENSGACG00000017630	si:ch211-217k17.7	98	61.317	ENSORLG00015021538	si:ch211-217k17.7	85	60.494	Oryzias_latipes_hsok
ENSGACG00000017630	si:ch211-217k17.7	89	55.702	ENSOMEG00000007064	si:ch211-217k17.7	82	54.825	Oryzias_melastigma
ENSGACG00000017630	si:ch211-217k17.7	51	59.829	ENSOGAG00000016746	CCDC86	53	46.632	Otolemur_garnettii
ENSGACG00000017630	si:ch211-217k17.7	85	45.909	ENSOARG00000015563	-	59	46.009	Ovis_aries
ENSGACG00000017630	si:ch211-217k17.7	100	49.802	ENSPKIG00000016503	si:ch211-217k17.7	83	49.012	Paramormyrops_kingsleyae
ENSGACG00000017630	si:ch211-217k17.7	95	59.829	ENSPMGG00000023665	si:ch211-217k17.7	86	61.066	Periophthalmus_magnuspinnatus
ENSGACG00000017630	si:ch211-217k17.7	99	58.661	ENSPFOG00000011617	si:ch211-217k17.7	86	59.843	Poecilia_formosa
ENSGACG00000017630	si:ch211-217k17.7	99	58.661	ENSPLAG00000016122	si:ch211-217k17.7	86	59.843	Poecilia_latipinna
ENSGACG00000017630	si:ch211-217k17.7	99	58.661	ENSPMEG00000018535	si:ch211-217k17.7	85	59.843	Poecilia_mexicana
ENSGACG00000017630	si:ch211-217k17.7	99	59.055	ENSPREG00000005478	si:ch211-217k17.7	85	60.236	Poecilia_reticulata
ENSGACG00000017630	si:ch211-217k17.7	51	76.923	ENSPNAG00000010886	si:ch211-217k17.7	51	76.923	Pygocentrus_nattereri
ENSGACG00000017630	si:ch211-217k17.7	95	71.041	ENSSMAG00000007686	si:ch211-217k17.7	80	71.861	Scophthalmus_maximus
ENSGACG00000017630	si:ch211-217k17.7	93	66.210	ENSSDUG00000002689	si:ch211-217k17.7	82	66.063	Seriola_dumerili
ENSGACG00000017630	si:ch211-217k17.7	99	67.811	ENSSLDG00000016681	si:ch211-217k17.7	80	67.660	Seriola_lalandi_dorsalis
ENSGACG00000017630	si:ch211-217k17.7	95	64.135	ENSSPAG00000000367	si:ch211-217k17.7	83	65.587	Stegastes_partitus
ENSGACG00000017630	si:ch211-217k17.7	86	58.824	ENSTRUG00000024101	si:ch211-217k17.7	76	58.824	Takifugu_rubripes
ENSGACG00000017630	si:ch211-217k17.7	99	58.103	ENSXCOG00000011207	si:ch211-217k17.7	84	57.708	Xiphophorus_couchianus
ENSGACG00000017630	si:ch211-217k17.7	99	57.312	ENSXMAG00000005529	si:ch211-217k17.7	84	58.800	Xiphophorus_maculatus