EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017647 (Gene tree)
Gene ID: -
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 35486 bases
Position: chrgroupXIV:8597952-8633437
Accession: ZDB-GENE-040426-931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023327	DRY_EERY	PF09750.9	6.3e-31	1	1
ENSGACP00000023334	DRY_EERY	PF09750.9	7e-31	1	1
ENSGACP00000023327	Surp	PF01805.20	8.9e-30	1	2
ENSGACP00000023327	Surp	PF01805.20	8.9e-30	2	2
ENSGACP00000023334	Surp	PF01805.20	1.1e-29	1	2
ENSGACP00000023334	Surp	PF01805.20	1.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000023380	-	2739	-	ENSGACP00000023334	912 (aa)	-	G3Q0E2
ENSGACT00000023373	-	2952	-	ENSGACP00000023327	843 (aa)	-	G3Q0D5

Gene Model

Click here to download ENSGACG00000017647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017647	sfswap	99	55.834	ENSG00000061936	SFSWAP	90	66.667	Homo_sapiens
ENSGACG00000017647	sfswap	85	82.692	ENSAPOG00000005784	sfswap	84	70.700	Acanthochromis_polyacanthus
ENSGACG00000017647	sfswap	99	54.028	ENSAMEG00000013818	SFSWAP	79	70.588	Ailuropoda_melanoleuca
ENSGACG00000017647	sfswap	92	71.574	ENSAOCG00000016469	sfswap	83	71.137	Amphiprion_ocellaris
ENSGACG00000017647	sfswap	92	70.700	ENSAPEG00000004965	sfswap	83	70.991	Amphiprion_percula
ENSGACG00000017647	sfswap	92	79.245	ENSATEG00000021053	sfswap	82	79.245	Anabas_testudineus
ENSGACG00000017647	sfswap	99	54.931	ENSAPLG00000013808	SFSWAP	78	62.963	Anas_platyrhynchos
ENSGACG00000017647	sfswap	96	51.029	ENSACAG00000007220	SFSWAP	80	67.308	Anolis_carolinensis
ENSGACG00000017647	sfswap	99	55.032	ENSANAG00000001518	SFSWAP	75	70.588	Aotus_nancymaae
ENSGACG00000017647	sfswap	92	68.314	ENSACLG00000020159	sfswap	70	89.655	Astatotilapia_calliptera
ENSGACG00000017647	sfswap	86	63.099	ENSAMXG00000008657	sfswap	74	81.818	Astyanax_mexicanus
ENSGACG00000017647	sfswap	99	54.557	ENSBTAG00000000439	SFSWAP	63	87.755	Bos_taurus
ENSGACG00000017647	sfswap	99	54.487	ENSCJAG00000003613	SFSWAP	75	70.588	Callithrix_jacchus
ENSGACG00000017647	sfswap	99	55.484	ENSCAFG00000006625	SFSWAP	75	70.588	Canis_familiaris
ENSGACG00000017647	sfswap	89	49.218	ENSCAFG00020011254	SFSWAP	73	70.588	Canis_lupus_dingo
ENSGACG00000017647	sfswap	99	53.952	ENSCHIG00000008838	SFSWAP	76	70.588	Capra_hircus
ENSGACG00000017647	sfswap	93	64.865	ENSTSYG00000010303	SFSWAP	77	72.549	Carlito_syrichta
ENSGACG00000017647	sfswap	95	52.772	ENSCAPG00000004394	SFSWAP	76	70.588	Cavia_aperea
ENSGACG00000017647	sfswap	99	53.454	ENSCPOG00000005280	SFSWAP	77	70.588	Cavia_porcellus
ENSGACG00000017647	sfswap	93	65.041	ENSCCAG00000037255	SFSWAP	78	70.588	Cebus_capucinus
ENSGACG00000017647	sfswap	93	65.684	ENSCATG00000031094	SFSWAP	78	70.588	Cercocebus_atys
ENSGACG00000017647	sfswap	99	54.877	ENSCLAG00000008380	SFSWAP	77	70.588	Chinchilla_lanigera
ENSGACG00000017647	sfswap	93	65.416	ENSCSAG00000001884	SFSWAP	78	70.588	Chlorocebus_sabaeus
ENSGACG00000017647	sfswap	88	59.909	ENSCHOG00000003578	SFSWAP	69	72.727	Choloepus_hoffmanni
ENSGACG00000017647	sfswap	98	57.163	ENSCPBG00000024757	SFSWAP	75	61.111	Chrysemys_picta_bellii
ENSGACG00000017647	sfswap	93	65.416	ENSCANG00000036501	SFSWAP	78	70.588	Colobus_angolensis_palliatus
ENSGACG00000017647	sfswap	92	63.807	ENSCGRG00001011284	Sfswap	77	72.549	Cricetulus_griseus_chok1gshd
ENSGACG00000017647	sfswap	92	63.807	ENSCGRG00000017417	Sfswap	77	72.549	Cricetulus_griseus_crigri
ENSGACG00000017647	sfswap	91	66.763	ENSCSEG00000003773	sfswap	73	82.353	Cynoglossus_semilaevis
ENSGACG00000017647	sfswap	61	74.107	ENSCVAG00000001205	-	72	87.500	Cyprinodon_variegatus
ENSGACG00000017647	sfswap	94	62.687	ENSDARG00000005980	sfswap	86	81.818	Danio_rerio
ENSGACG00000017647	sfswap	99	55.260	ENSDNOG00000018742	SFSWAP	73	72.549	Dasypus_novemcinctus
ENSGACG00000017647	sfswap	99	49.947	ENSDORG00000010352	Sfswap	79	66.667	Dipodomys_ordii
ENSGACG00000017647	sfswap	56	45.570	FBgn0003638	su(w[a])	56	53.933	Drosophila_melanogaster
ENSGACG00000017647	sfswap	76	72.549	ENSETEG00000016657	-	62	95.455	Echinops_telfairi
ENSGACG00000017647	sfswap	87	36.161	ENSEBUG00000016748	SFSWAP	73	37.761	Eptatretus_burgeri
ENSGACG00000017647	sfswap	99	55.400	ENSEASG00005016502	SFSWAP	78	70.588	Equus_asinus_asinus
ENSGACG00000017647	sfswap	99	55.527	ENSECAG00000007657	SFSWAP	74	70.588	Equus_caballus
ENSGACG00000017647	sfswap	79	52.557	ENSEEUG00000001713	SFSWAP	68	70.588	Erinaceus_europaeus
ENSGACG00000017647	sfswap	100	54.051	ENSELUG00000010942	sfswap	83	78.626	Esox_lucius
ENSGACG00000017647	sfswap	99	54.614	ENSFCAG00000010778	SFSWAP	78	70.588	Felis_catus
ENSGACG00000017647	sfswap	99	51.717	ENSFALG00000009577	SFSWAP	76	71.739	Ficedula_albicollis
ENSGACG00000017647	sfswap	99	54.797	ENSFDAG00000017235	SFSWAP	75	70.588	Fukomys_damarensis
ENSGACG00000017647	sfswap	83	80.272	ENSGMOG00000009205	sfswap	61	81.293	Gadus_morhua
ENSGACG00000017647	sfswap	99	55.367	ENSGALG00000002487	SFSWAP	78	62.963	Gallus_gallus
ENSGACG00000017647	sfswap	92	66.859	ENSGAFG00000006272	sfswap	97	57.068	Gambusia_affinis
ENSGACG00000017647	sfswap	98	56.783	ENSGAGG00000002611	SFSWAP	69	70.455	Gopherus_agassizii
ENSGACG00000017647	sfswap	93	65.416	ENSGGOG00000014877	SFSWAP	77	70.588	Gorilla_gorilla
ENSGACG00000017647	sfswap	87	75.455	ENSHBUG00000005629	sfswap	83	73.939	Haplochromis_burtoni
ENSGACG00000017647	sfswap	92	64.439	ENSHGLG00000019216	SFSWAP	75	70.588	Heterocephalus_glaber_female
ENSGACG00000017647	sfswap	92	64.439	ENSHGLG00100019350	SFSWAP	75	70.588	Heterocephalus_glaber_male
ENSGACG00000017647	sfswap	90	72.340	ENSHCOG00000009475	sfswap	78	72.340	Hippocampus_comes
ENSGACG00000017647	sfswap	83	82.353	ENSIPUG00000010598	sfswap	75	81.081	Ictalurus_punctatus
ENSGACG00000017647	sfswap	99	55.224	ENSSTOG00000000773	SFSWAP	77	72.549	Ictidomys_tridecemlineatus
ENSGACG00000017647	sfswap	99	55.376	ENSJJAG00000006609	Sfswap	78	72.549	Jaculus_jaculus
ENSGACG00000017647	sfswap	92	67.723	ENSKMAG00000013168	sfswap	76	69.553	Kryptolebias_marmoratus
ENSGACG00000017647	sfswap	79	67.432	ENSLBEG00000010239	sfswap	73	69.516	Labrus_bergylta
ENSGACG00000017647	sfswap	88	77.273	ENSLACG00000018678	SFSWAP	78	66.667	Latimeria_chalumnae
ENSGACG00000017647	sfswap	67	70.968	ENSLOCG00000006202	sfswap	76	70.370	Lepisosteus_oculatus
ENSGACG00000017647	sfswap	88	64.134	ENSLAFG00000014462	SFSWAP	81	72.549	Loxodonta_africana
ENSGACG00000017647	sfswap	99	55.682	ENSMFAG00000037352	SFSWAP	74	70.588	Macaca_fascicularis
ENSGACG00000017647	sfswap	99	56.009	ENSMMUG00000020343	SFSWAP	78	70.588	Macaca_mulatta
ENSGACG00000017647	sfswap	99	56.009	ENSMNEG00000041002	SFSWAP	78	70.588	Macaca_nemestrina
ENSGACG00000017647	sfswap	93	62.466	ENSMLEG00000035728	SFSWAP	77	70.588	Mandrillus_leucophaeus
ENSGACG00000017647	sfswap	92	67.719	ENSMAMG00000006631	sfswap	74	86.275	Mastacembelus_armatus
ENSGACG00000017647	sfswap	90	68.314	ENSMZEG00005017834	SFSWAP	70	89.655	Maylandia_zebra
ENSGACG00000017647	sfswap	99	54.135	ENSMGAG00000002191	SFSWAP	75	62.963	Meleagris_gallopavo
ENSGACG00000017647	sfswap	92	64.879	ENSMICG00000004465	SFSWAP	77	72.549	Microcebus_murinus
ENSGACG00000017647	sfswap	92	64.228	ENSMOCG00000014390	Sfswap	77	72.549	Microtus_ochrogaster
ENSGACG00000017647	sfswap	85	63.487	ENSMODG00000015581	SFSWAP	72	62.963	Monodelphis_domestica
ENSGACG00000017647	sfswap	79	69.666	ENSMALG00000012603	sfswap	80	81.250	Monopterus_albus
ENSGACG00000017647	sfswap	99	53.583	MGP_CAROLIEiJ_G0027780	Sfswap	77	72.549	Mus_caroli
ENSGACG00000017647	sfswap	99	53.433	ENSMUSG00000029439	Sfswap	77	72.549	Mus_musculus
ENSGACG00000017647	sfswap	99	53.591	MGP_PahariEiJ_G0024360	Sfswap	77	72.549	Mus_pahari
ENSGACG00000017647	sfswap	99	53.433	MGP_SPRETEiJ_G0028779	Sfswap	75	72.549	Mus_spretus
ENSGACG00000017647	sfswap	99	55.198	ENSMPUG00000002218	SFSWAP	75	70.588	Mustela_putorius_furo
ENSGACG00000017647	sfswap	83	54.315	ENSMLUG00000011296	SFSWAP	74	58.971	Myotis_lucifugus
ENSGACG00000017647	sfswap	99	54.709	ENSNGAG00000018167	Sfswap	79	61.290	Nannospalax_galili
ENSGACG00000017647	sfswap	88	66.667	ENSNBRG00000020857	sfswap	84	69.632	Neolamprologus_brichardi
ENSGACG00000017647	sfswap	98	53.405	ENSNLEG00000008386	SFSWAP	73	58.782	Nomascus_leucogenys
ENSGACG00000017647	sfswap	66	65.574	ENSOPRG00000006983	-	64	70.588	Ochotona_princeps
ENSGACG00000017647	sfswap	54	49.414	ENSODEG00000008020	SFSWAP	79	70.588	Octodon_degus
ENSGACG00000017647	sfswap	91	72.956	ENSONIG00000003757	sfswap	74	93.478	Oreochromis_niloticus
ENSGACG00000017647	sfswap	51	64.458	ENSOANG00000013861	SFSWAP	81	62.963	Ornithorhynchus_anatinus
ENSGACG00000017647	sfswap	61	64.499	ENSOCUG00000002165	SFSWAP	79	72.549	Oryctolagus_cuniculus
ENSGACG00000017647	sfswap	85	64.966	ENSORLG00000010983	sfswap	70	67.521	Oryzias_latipes
ENSGACG00000017647	sfswap	85	65.094	ENSORLG00020010779	sfswap	70	67.806	Oryzias_latipes_hni
ENSGACG00000017647	sfswap	98	65.416	ENSORLG00015023093	sfswap	80	68.188	Oryzias_latipes_hsok
ENSGACG00000017647	sfswap	92	69.635	ENSOMEG00000022065	sfswap	73	85.106	Oryzias_melastigma
ENSGACG00000017647	sfswap	99	55.089	ENSOARG00000014314	SFSWAP	76	68.627	Ovis_aries
ENSGACG00000017647	sfswap	93	65.416	ENSPPAG00000036706	SFSWAP	77	70.588	Pan_paniscus
ENSGACG00000017647	sfswap	99	51.915	ENSPPRG00000017318	SFSWAP	72	70.588	Panthera_pardus
ENSGACG00000017647	sfswap	98	50.333	ENSPTIG00000004304	SFSWAP	71	56.528	Panthera_tigris_altaica
ENSGACG00000017647	sfswap	93	65.416	ENSPTRG00000005640	SFSWAP	78	70.588	Pan_troglodytes
ENSGACG00000017647	sfswap	93	65.684	ENSPANG00000019737	SFSWAP	78	70.588	Papio_anubis
ENSGACG00000017647	sfswap	72	62.482	ENSPKIG00000008327	sfswap	70	62.573	Paramormyrops_kingsleyae
ENSGACG00000017647	sfswap	53	50.802	ENSPSIG00000017807	SFSWAP	64	61.111	Pelodiscus_sinensis
ENSGACG00000017647	sfswap	92	64.228	ENSPEMG00000001237	Sfswap	77	72.549	Peromyscus_maniculatus_bairdii
ENSGACG00000017647	sfswap	53	53.728	ENSPMAG00000008279	sfswap	99	54.286	Petromyzon_marinus
ENSGACG00000017647	sfswap	99	51.852	ENSPCIG00000006062	SFSWAP	73	62.963	Phascolarctos_cinereus
ENSGACG00000017647	sfswap	79	65.335	ENSPFOG00000019657	sfswap	74	82.353	Poecilia_formosa
ENSGACG00000017647	sfswap	79	65.478	ENSPLAG00000008513	sfswap	74	82.353	Poecilia_latipinna
ENSGACG00000017647	sfswap	79	65.335	ENSPMEG00000008716	sfswap	75	82.353	Poecilia_mexicana
ENSGACG00000017647	sfswap	79	64.765	ENSPREG00000006692	sfswap	80	67.971	Poecilia_reticulata
ENSGACG00000017647	sfswap	91	65.416	ENSPPYG00000005129	SFSWAP	77	60.761	Pongo_abelii
ENSGACG00000017647	sfswap	57	60.202	ENSPCAG00000004977	-	57	62.893	Procavia_capensis
ENSGACG00000017647	sfswap	92	64.611	ENSPCOG00000023786	SFSWAP	77	72.549	Propithecus_coquereli
ENSGACG00000017647	sfswap	84	62.112	ENSPVAG00000014918	SFSWAP	61	89.362	Pteropus_vampyrus
ENSGACG00000017647	sfswap	92	68.169	ENSPNYG00000012660	sfswap	82	75.152	Pundamilia_nyererei
ENSGACG00000017647	sfswap	84	80.952	ENSPNAG00000007073	sfswap	74	80.952	Pygocentrus_nattereri
ENSGACG00000017647	sfswap	92	63.807	ENSRNOG00000000931	Sfswap	77	72.549	Rattus_norvegicus
ENSGACG00000017647	sfswap	99	50.858	ENSRBIG00000036330	SFSWAP	76	70.588	Rhinopithecus_bieti
ENSGACG00000017647	sfswap	93	65.684	ENSRROG00000032001	SFSWAP	78	70.588	Rhinopithecus_roxellana
ENSGACG00000017647	sfswap	99	54.757	ENSSBOG00000026217	SFSWAP	89	62.887	Saimiri_boliviensis_boliviensis
ENSGACG00000017647	sfswap	95	53.855	ENSSHAG00000014232	SFSWAP	78	68.627	Sarcophilus_harrisii
ENSGACG00000017647	sfswap	71	63.663	ENSSFOG00015000766	sfswap	74	76.190	Scleropages_formosus
ENSGACG00000017647	sfswap	83	67.397	ENSSMAG00000018718	sfswap	82	69.041	Scophthalmus_maximus
ENSGACG00000017647	sfswap	96	66.074	ENSSDUG00000021680	sfswap	84	70.166	Seriola_dumerili
ENSGACG00000017647	sfswap	96	67.361	ENSSLDG00000010835	sfswap	84	69.861	Seriola_lalandi_dorsalis
ENSGACG00000017647	sfswap	81	63.492	ENSSARG00000000424	SFSWAP	78	70.588	Sorex_araneus
ENSGACG00000017647	sfswap	89	49.538	ENSSPUG00000010272	SFSWAP	77	71.154	Sphenodon_punctatus
ENSGACG00000017647	sfswap	79	92.683	ENSSPAG00000014310	sfswap	70	71.552	Stegastes_partitus
ENSGACG00000017647	sfswap	99	54.478	ENSSSCG00000009744	SFSWAP	76	70.588	Sus_scrofa
ENSGACG00000017647	sfswap	99	54.574	ENSTGUG00000004623	SFSWAP	80	62.963	Taeniopygia_guttata
ENSGACG00000017647	sfswap	89	75.000	ENSTTRG00000013478	SFSWAP	75	75.000	Tursiops_truncatus
ENSGACG00000017647	sfswap	99	54.672	ENSUAMG00000016807	SFSWAP	79	70.588	Ursus_americanus
ENSGACG00000017647	sfswap	82	64.672	ENSUMAG00000002957	SFSWAP	76	55.493	Ursus_maritimus
ENSGACG00000017647	sfswap	51	77.320	ENSVPAG00000010479	-	59	76.667	Vicugna_pacos
ENSGACG00000017647	sfswap	99	55.484	ENSVVUG00000010753	SFSWAP	75	70.588	Vulpes_vulpes
ENSGACG00000017647	sfswap	99	53.450	ENSXETG00000009350	sfswap	93	58.194	Xenopus_tropicalis
ENSGACG00000017647	sfswap	92	65.136	ENSXMAG00000009020	sfswap	84	68.360	Xiphophorus_maculatus