EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017756 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3182 bases
Position: chrscaffold_137:191197-194378
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023460	zf-U11-48K	PF05253.12	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000023506	-	1005	-	ENSGACP00000023460	335 (aa)	-	G3Q0R5

Gene Model

Click here to download ENSGACG00000017756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017756's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017756	-	84	48.084	ENSG00000168566	SNRNP48	71	51.240	Homo_sapiens
ENSGACG00000017756	-	96	73.148	ENSAPOG00000021430	snrnp48	72	79.268	Acanthochromis_polyacanthus
ENSGACG00000017756	-	96	44.152	ENSAMEG00000017349	SNRNP48	69	50.622	Ailuropoda_melanoleuca
ENSGACG00000017756	-	96	67.391	ENSACIG00000002032	snrnp48	74	71.888	Amphilophus_citrinellus
ENSGACG00000017756	-	96	73.457	ENSAOCG00000010562	snrnp48	72	79.268	Amphiprion_ocellaris
ENSGACG00000017756	-	96	72.840	ENSAPEG00000003231	snrnp48	73	79.268	Amphiprion_percula
ENSGACG00000017756	-	96	73.684	ENSATEG00000020210	snrnp48	74	79.518	Anabas_testudineus
ENSGACG00000017756	-	84	47.458	ENSACAG00000002811	SNRNP48	62	52.736	Anolis_carolinensis
ENSGACG00000017756	-	84	48.432	ENSANAG00000033538	SNRNP48	71	51.653	Aotus_nancymaae
ENSGACG00000017756	-	97	54.242	ENSAMXG00000015309	snrnp48	74	62.449	Astyanax_mexicanus
ENSGACG00000017756	-	95	42.775	ENSBTAG00000001123	SNRNP48	72	50.806	Bos_taurus
ENSGACG00000017756	-	84	48.780	ENSCJAG00000021330	SNRNP48	71	52.066	Callithrix_jacchus
ENSGACG00000017756	-	96	44.023	ENSCAFG00000009574	SNRNP48	59	49.587	Canis_familiaris
ENSGACG00000017756	-	96	44.023	ENSCAFG00020013203	SNRNP48	71	49.587	Canis_lupus_dingo
ENSGACG00000017756	-	95	43.064	ENSCHIG00000015216	SNRNP48	72	51.613	Capra_hircus
ENSGACG00000017756	-	84	47.038	ENSTSYG00000000698	SNRNP48	71	49.174	Carlito_syrichta
ENSGACG00000017756	-	90	43.902	ENSCAPG00000006768	SNRNP48	72	50.893	Cavia_aperea
ENSGACG00000017756	-	96	43.353	ENSCPOG00000007910	SNRNP48	71	50.000	Cavia_porcellus
ENSGACG00000017756	-	84	48.084	ENSCCAG00000035652	SNRNP48	71	52.066	Cebus_capucinus
ENSGACG00000017756	-	96	44.606	ENSCATG00000033947	SNRNP48	76	46.364	Cercocebus_atys
ENSGACG00000017756	-	84	48.084	ENSCLAG00000003765	SNRNP48	73	49.801	Chinchilla_lanigera
ENSGACG00000017756	-	84	48.432	ENSCSAG00000007409	SNRNP48	71	51.240	Chlorocebus_sabaeus
ENSGACG00000017756	-	84	44.554	ENSCPBG00000019146	SNRNP48	63	52.239	Chrysemys_picta_bellii
ENSGACG00000017756	-	84	48.432	ENSCANG00000030017	SNRNP48	71	51.653	Colobus_angolensis_palliatus
ENSGACG00000017756	-	96	45.289	ENSCGRG00001001076	-	74	49.004	Cricetulus_griseus_chok1gshd
ENSGACG00000017756	-	83	39.649	ENSCGRG00001008805	-	72	42.918	Cricetulus_griseus_chok1gshd
ENSGACG00000017756	-	96	45.289	ENSCGRG00000007781	Snrnp48	74	49.004	Cricetulus_griseus_crigri
ENSGACG00000017756	-	96	66.562	ENSCSEG00000000722	snrnp48	69	72.016	Cynoglossus_semilaevis
ENSGACG00000017756	-	91	62.899	ENSCVAG00000019829	snrnp48	64	77.600	Cyprinodon_variegatus
ENSGACG00000017756	-	95	50.000	ENSDARG00000039989	snrnp48	71	55.738	Danio_rerio
ENSGACG00000017756	-	84	46.713	ENSDNOG00000014978	SNRNP48	81	43.750	Dasypus_novemcinctus
ENSGACG00000017756	-	96	43.228	ENSDORG00000015140	Snrnp48	71	49.794	Dipodomys_ordii
ENSGACG00000017756	-	84	47.766	ENSEASG00005012021	SNRNP48	72	50.407	Equus_asinus_asinus
ENSGACG00000017756	-	84	47.735	ENSECAG00000026937	SNRNP48	71	50.413	Equus_caballus
ENSGACG00000017756	-	84	31.944	ENSEEUG00000015437	SNRNP48	71	32.510	Erinaceus_europaeus
ENSGACG00000017756	-	86	59.247	ENSELUG00000009766	snrnp48	69	63.454	Esox_lucius
ENSGACG00000017756	-	84	48.097	ENSFCAG00000018853	SNRNP48	71	51.029	Felis_catus
ENSGACG00000017756	-	73	53.846	ENSFALG00000007797	SNRNP48	64	57.426	Ficedula_albicollis
ENSGACG00000017756	-	96	44.220	ENSFDAG00000009231	SNRNP48	71	50.826	Fukomys_damarensis
ENSGACG00000017756	-	61	82.266	ENSFHEG00000014647	snrnp48	70	82.178	Fundulus_heteroclitus
ENSGACG00000017756	-	94	62.963	ENSGMOG00000018599	-	77	68.273	Gadus_morhua
ENSGACG00000017756	-	80	52.920	ENSGALG00000013005	SNRNP48	67	57.426	Gallus_gallus
ENSGACG00000017756	-	76	76.378	ENSGAFG00000021639	snrnp48	73	75.600	Gambusia_affinis
ENSGACG00000017756	-	84	44.224	ENSGAGG00000000865	SNRNP48	65	51.244	Gopherus_agassizii
ENSGACG00000017756	-	84	48.432	ENSGGOG00000013220	SNRNP48	71	51.653	Gorilla_gorilla
ENSGACG00000017756	-	96	70.898	ENSHBUG00000017066	snrnp48	72	77.510	Haplochromis_burtoni
ENSGACG00000017756	-	84	46.690	ENSHGLG00000015241	SNRNP48	71	49.174	Heterocephalus_glaber_female
ENSGACG00000017756	-	84	46.690	ENSHGLG00100010027	SNRNP48	71	49.174	Heterocephalus_glaber_male
ENSGACG00000017756	-	74	73.092	ENSHCOG00000014066	snrnp48	72	73.092	Hippocampus_comes
ENSGACG00000017756	-	84	48.084	ENSSTOG00000014635	SNRNP48	71	50.413	Ictidomys_tridecemlineatus
ENSGACG00000017756	-	77	49.813	ENSJJAG00000011495	Snrnp48	72	51.626	Jaculus_jaculus
ENSGACG00000017756	-	97	69.753	ENSKMAG00000016514	snrnp48	72	76.923	Kryptolebias_marmoratus
ENSGACG00000017756	-	77	79.767	ENSLBEG00000026249	snrnp48	73	80.321	Labrus_bergylta
ENSGACG00000017756	-	94	50.926	ENSLACG00000003958	SNRNP48	73	55.200	Latimeria_chalumnae
ENSGACG00000017756	-	88	56.711	ENSLOCG00000004187	snrnp48	74	60.643	Lepisosteus_oculatus
ENSGACG00000017756	-	76	48.485	ENSLAFG00000011152	SNRNP48	71	50.206	Loxodonta_africana
ENSGACG00000017756	-	84	48.432	ENSMFAG00000045216	SNRNP48	71	51.653	Macaca_fascicularis
ENSGACG00000017756	-	84	48.432	ENSMMUG00000014785	SNRNP48	71	51.653	Macaca_mulatta
ENSGACG00000017756	-	84	48.432	ENSMNEG00000042269	SNRNP48	71	51.653	Macaca_nemestrina
ENSGACG00000017756	-	84	48.432	ENSMLEG00000034004	SNRNP48	71	51.653	Mandrillus_leucophaeus
ENSGACG00000017756	-	97	72.000	ENSMAMG00000018673	snrnp48	65	78.226	Mastacembelus_armatus
ENSGACG00000017756	-	84	50.164	ENSMGAG00000006037	SNRNP48	67	57.921	Meleagris_gallopavo
ENSGACG00000017756	-	96	44.343	ENSMAUG00000011944	Snrnp48	74	48.606	Mesocricetus_auratus
ENSGACG00000017756	-	84	47.222	ENSMICG00000012497	SNRNP48	71	49.794	Microcebus_murinus
ENSGACG00000017756	-	95	45.231	ENSMOCG00000015555	Snrnp48	76	49.416	Microtus_ochrogaster
ENSGACG00000017756	-	56	83.069	ENSMMOG00000003072	-	60	83.069	Mola_mola
ENSGACG00000017756	-	86	46.780	ENSMODG00000009996	SNRNP48	68	47.619	Monodelphis_domestica
ENSGACG00000017756	-	77	79.767	ENSMALG00000005725	snrnp48	73	80.321	Monopterus_albus
ENSGACG00000017756	-	96	42.486	MGP_CAROLIEiJ_G0018441	Snrnp48	74	49.004	Mus_caroli
ENSGACG00000017756	-	96	44.985	ENSMUSG00000021431	Snrnp48	74	49.004	Mus_musculus
ENSGACG00000017756	-	96	45.289	MGP_PahariEiJ_G0019509	Snrnp48	74	49.402	Mus_pahari
ENSGACG00000017756	-	96	44.985	MGP_SPRETEiJ_G0019321	Snrnp48	74	49.004	Mus_spretus
ENSGACG00000017756	-	96	43.642	ENSNGAG00000004849	Snrnp48	71	51.653	Nannospalax_galili
ENSGACG00000017756	-	96	70.898	ENSNBRG00000012127	snrnp48	73	77.108	Neolamprologus_brichardi
ENSGACG00000017756	-	84	48.432	ENSNLEG00000011667	SNRNP48	71	51.653	Nomascus_leucogenys
ENSGACG00000017756	-	89	42.991	ENSOPRG00000015471	SNRNP48	77	48.400	Ochotona_princeps
ENSGACG00000017756	-	96	71.207	ENSONIG00000001520	snrnp48	73	77.108	Oreochromis_niloticus
ENSGACG00000017756	-	53	36.318	ENSOANG00000019888	-	96	36.318	Ornithorhynchus_anatinus
ENSGACG00000017756	-	83	47.368	ENSOCUG00000005168	SNRNP48	80	50.813	Oryctolagus_cuniculus
ENSGACG00000017756	-	90	73.090	ENSORLG00000015654	snrnp48	71	76.829	Oryzias_latipes
ENSGACG00000017756	-	90	71.429	ENSORLG00020015976	snrnp48	61	75.610	Oryzias_latipes_hni
ENSGACG00000017756	-	90	72.093	ENSORLG00015022379	snrnp48	61	76.423	Oryzias_latipes_hsok
ENSGACG00000017756	-	96	70.588	ENSOMEG00000022007	snrnp48	73	75.904	Oryzias_melastigma
ENSGACG00000017756	-	87	47.000	ENSOGAG00000005275	SNRNP48	76	49.020	Otolemur_garnettii
ENSGACG00000017756	-	74	48.810	ENSOARG00000017319	SNRNP48	71	52.174	Ovis_aries
ENSGACG00000017756	-	84	48.432	ENSPPAG00000032873	SNRNP48	71	51.653	Pan_paniscus
ENSGACG00000017756	-	84	48.264	ENSPPRG00000004283	SNRNP48	71	51.029	Panthera_pardus
ENSGACG00000017756	-	74	48.810	ENSPTIG00000013502	SNRNP48	69	52.970	Panthera_tigris_altaica
ENSGACG00000017756	-	84	48.432	ENSPTRG00000017703	SNRNP48	71	51.653	Pan_troglodytes
ENSGACG00000017756	-	84	48.432	ENSPANG00000000771	SNRNP48	71	51.653	Papio_anubis
ENSGACG00000017756	-	91	55.723	ENSPKIG00000013703	snrnp48	51	63.598	Paramormyrops_kingsleyae
ENSGACG00000017756	-	76	64.341	ENSPMGG00000008120	snrnp48	90	64.567	Periophthalmus_magnuspinnatus
ENSGACG00000017756	-	96	45.593	ENSPEMG00000008872	Snrnp48	74	49.801	Peromyscus_maniculatus_bairdii
ENSGACG00000017756	-	76	77.953	ENSPFOG00000003578	snrnp48	73	77.200	Poecilia_formosa
ENSGACG00000017756	-	69	77.489	ENSPLAG00000002290	snrnp48	80	77.489	Poecilia_latipinna
ENSGACG00000017756	-	76	77.559	ENSPMEG00000018033	snrnp48	73	76.800	Poecilia_mexicana
ENSGACG00000017756	-	74	77.823	ENSPREG00000018541	snrnp48	73	77.200	Poecilia_reticulata
ENSGACG00000017756	-	84	48.084	ENSPPYG00000016209	SNRNP48	71	51.240	Pongo_abelii
ENSGACG00000017756	-	72	35.968	ENSPCAG00000011991	SNRNP48	95	36.923	Procavia_capensis
ENSGACG00000017756	-	84	46.154	ENSPVAG00000002854	SNRNP48	73	48.400	Pteropus_vampyrus
ENSGACG00000017756	-	95	61.610	ENSPNYG00000015399	snrnp48	80	77.912	Pundamilia_nyererei
ENSGACG00000017756	-	96	43.353	ENSRNOG00000013756	Snrnp48	74	49.801	Rattus_norvegicus
ENSGACG00000017756	-	84	48.432	ENSRBIG00000043856	SNRNP48	76	51.653	Rhinopithecus_bieti
ENSGACG00000017756	-	84	48.432	ENSRROG00000043229	SNRNP48	71	51.653	Rhinopithecus_roxellana
ENSGACG00000017756	-	84	48.780	ENSSBOG00000019486	SNRNP48	71	52.066	Saimiri_boliviensis_boliviensis
ENSGACG00000017756	-	86	47.138	ENSSHAG00000014483	SNRNP48	72	48.425	Sarcophilus_harrisii
ENSGACG00000017756	-	74	58.268	ENSSFOG00015006610	snrnp48	60	58.498	Scleropages_formosus
ENSGACG00000017756	-	97	74.618	ENSSDUG00000014953	snrnp48	73	81.124	Seriola_dumerili
ENSGACG00000017756	-	97	74.618	ENSSLDG00000005989	snrnp48	74	81.526	Seriola_lalandi_dorsalis
ENSGACG00000017756	-	79	49.814	ENSSPUG00000006257	SNRNP48	56	52.736	Sphenodon_punctatus
ENSGACG00000017756	-	97	76.308	ENSSPAG00000006454	snrnp48	73	81.781	Stegastes_partitus
ENSGACG00000017756	-	83	49.502	ENSTGUG00000007575	SNRNP48	64	58.416	Taeniopygia_guttata
ENSGACG00000017756	-	75	71.713	ENSTRUG00000007031	snrnp48	74	72.000	Takifugu_rubripes
ENSGACG00000017756	-	100	65.179	ENSTNIG00000012977	-	76	73.200	Tetraodon_nigroviridis
ENSGACG00000017756	-	74	49.020	ENSTBEG00000015620	SNRNP48	74	48.606	Tupaia_belangeri
ENSGACG00000017756	-	95	42.733	ENSTTRG00000016715	SNRNP48	72	51.220	Tursiops_truncatus
ENSGACG00000017756	-	96	44.152	ENSUAMG00000003690	SNRNP48	71	50.622	Ursus_americanus
ENSGACG00000017756	-	74	48.413	ENSVPAG00000003557	SNRNP48	69	52.475	Vicugna_pacos
ENSGACG00000017756	-	96	44.023	ENSVVUG00000004996	SNRNP48	71	49.587	Vulpes_vulpes
ENSGACG00000017756	-	89	43.478	ENSXETG00000020447	snrnp48	70	50.000	Xenopus_tropicalis
ENSGACG00000017756	-	69	76.724	ENSXCOG00000004478	snrnp48	72	76.068	Xiphophorus_couchianus
ENSGACG00000017756	-	76	77.559	ENSXMAG00000013595	snrnp48	73	76.800	Xiphophorus_maculatus