EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000017772 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 5196 bases
Position: chrgroupIII:15930985-15936180
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023487	RRM_1	PF00076.22	2.2e-13	1	1
ENSGACP00000023489	RRM_1	PF00076.22	3.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000023535	-	1551	-	ENSGACP00000023489	326 (aa)	-	G3Q0U4
ENSGACT00000023533	-	897	-	ENSGACP00000023487	259 (aa)	-	G3Q0U2

Gene Model

Click here to download ENSGACG00000017772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000017772	-	84	72.477	ENSGACG00000018932	-	86	72.477
ENSGACG00000017772	-	84	51.339	ENSGACG00000003636	raly	81	48.918
ENSGACG00000017772	-	65	62.209	ENSGACG00000004991	-	82	61.006

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017772	-	82	56.744	ENSG00000184672	RALYL	98	71.739	Homo_sapiens
ENSGACG00000017772	-	96	84.921	ENSAPOG00000006963	hnrnpc	86	82.090	Acanthochromis_polyacanthus
ENSGACG00000017772	-	97	82.283	ENSACIG00000000270	-	89	81.716	Amphilophus_citrinellus
ENSGACG00000017772	-	97	89.683	ENSACIG00000016568	-	100	80.251	Amphilophus_citrinellus
ENSGACG00000017772	-	96	84.524	ENSAOCG00000003896	-	86	81.716	Amphiprion_ocellaris
ENSGACG00000017772	-	96	90.800	ENSAOCG00000021616	-	100	78.979	Amphiprion_ocellaris
ENSGACG00000017772	-	97	90.079	ENSAPEG00000019962	-	84	85.926	Amphiprion_percula
ENSGACG00000017772	-	96	84.524	ENSAPEG00000001489	-	86	81.716	Amphiprion_percula
ENSGACG00000017772	-	97	82.609	ENSATEG00000011734	-	89	81.413	Anabas_testudineus
ENSGACG00000017772	-	98	90.196	ENSATEG00000018006	-	100	80.363	Anabas_testudineus
ENSGACG00000017772	-	82	54.626	ENSAPLG00000015574	RALYL	76	54.867	Anas_platyrhynchos
ENSGACG00000017772	-	82	54.626	ENSACAG00000028464	RALYL	77	53.390	Anolis_carolinensis
ENSGACG00000017772	-	82	56.744	ENSANAG00000023383	RALYL	76	54.825	Aotus_nancymaae
ENSGACG00000017772	-	96	78.968	ENSACLG00000000995	-	86	78.067	Astatotilapia_calliptera
ENSGACG00000017772	-	96	78.968	ENSACLG00000013636	-	89	78.598	Astatotilapia_calliptera
ENSGACG00000017772	-	97	88.538	ENSACLG00000005707	-	88	86.873	Astatotilapia_calliptera
ENSGACG00000017772	-	93	77.593	ENSAMXG00000034915	zgc:55733	91	74.231	Astyanax_mexicanus
ENSGACG00000017772	-	81	77.358	ENSAMXG00000042946	hnrnpc	98	80.513	Astyanax_mexicanus
ENSGACG00000017772	-	82	56.744	ENSCJAG00000000402	RALYL	76	54.386	Callithrix_jacchus
ENSGACG00000017772	-	81	54.911	ENSCPOG00000012314	RALYL	74	54.425	Cavia_porcellus
ENSGACG00000017772	-	82	56.744	ENSCCAG00000025003	RALYL	82	70.238	Cebus_capucinus
ENSGACG00000017772	-	82	56.744	ENSCATG00000042145	RALYL	76	54.825	Cercocebus_atys
ENSGACG00000017772	-	83	53.478	ENSCLAG00000005228	RALYL	75	53.947	Chinchilla_lanigera
ENSGACG00000017772	-	82	53.304	ENSCHOG00000013228	RALYL	75	51.073	Choloepus_hoffmanni
ENSGACG00000017772	-	82	56.744	ENSCANG00000039144	RALYL	76	54.825	Colobus_angolensis_palliatus
ENSGACG00000017772	-	82	55.066	ENSCGRG00001009241	Ralyl	75	54.867	Cricetulus_griseus_chok1gshd
ENSGACG00000017772	-	97	84.462	ENSCSEG00000021349	-	80	83.333	Cynoglossus_semilaevis
ENSGACG00000017772	-	85	76.126	ENSCSEG00000019769	-	74	76.577	Cynoglossus_semilaevis
ENSGACG00000017772	-	99	65.056	ENSCVAG00000002797	-	89	64.312	Cyprinodon_variegatus
ENSGACG00000017772	-	96	88.800	ENSCVAG00000016981	-	100	77.015	Cyprinodon_variegatus
ENSGACG00000017772	-	97	78.175	ENSDARG00000103845	zgc:55733	96	74.903	Danio_rerio
ENSGACG00000017772	-	91	79.412	ENSDARG00000053810	hnrnpc	78	80.315	Danio_rerio
ENSGACG00000017772	-	82	55.066	ENSDORG00000003721	Ralyl	75	55.752	Dipodomys_ordii
ENSGACG00000017772	-	63	55.429	ENSETEG00000014028	RALYL	85	56.213	Echinops_telfairi
ENSGACG00000017772	-	81	45.662	ENSEBUG00000006049	RALYL	75	44.889	Eptatretus_burgeri
ENSGACG00000017772	-	88	47.521	ENSEBUG00000012363	hnrnpc	67	49.130	Eptatretus_burgeri
ENSGACG00000017772	-	83	54.545	ENSEEUG00000007202	RALYL	78	53.390	Erinaceus_europaeus
ENSGACG00000017772	-	93	78.125	ENSELUG00000007714	-	89	75.758	Esox_lucius
ENSGACG00000017772	-	99	79.767	ENSELUG00000004132	-	100	67.890	Esox_lucius
ENSGACG00000017772	-	82	56.221	ENSFALG00000008647	RALYL	99	53.947	Ficedula_albicollis
ENSGACG00000017772	-	97	84.586	ENSFHEG00000007278	-	83	83.824	Fundulus_heteroclitus
ENSGACG00000017772	-	99	75.465	ENSFHEG00000003605	-	88	74.170	Fundulus_heteroclitus
ENSGACG00000017772	-	81	57.209	ENSGALG00000036938	RALYL	74	54.867	Gallus_gallus
ENSGACG00000017772	-	97	88.889	ENSGAFG00000020992	-	100	77.950	Gambusia_affinis
ENSGACG00000017772	-	99	74.721	ENSGAFG00000020486	-	88	75.458	Gambusia_affinis
ENSGACG00000017772	-	82	56.744	ENSGGOG00000000841	RALYL	76	54.825	Gorilla_gorilla
ENSGACG00000017772	-	97	88.189	ENSHBUG00000010527	-	100	80.606	Haplochromis_burtoni
ENSGACG00000017772	-	96	79.762	ENSHBUG00000018342	-	86	78.439	Haplochromis_burtoni
ENSGACG00000017772	-	82	53.982	ENSHGLG00000004866	RALYL	75	54.464	Heterocephalus_glaber_female
ENSGACG00000017772	-	82	53.982	ENSHGLG00100017480	RALYL	75	54.464	Heterocephalus_glaber_male
ENSGACG00000017772	-	96	84.733	ENSHCOG00000012333	hnrnpc	88	83.704	Hippocampus_comes
ENSGACG00000017772	-	97	78.656	ENSIPUG00000011271	hnrnpc	100	81.116	Ictalurus_punctatus
ENSGACG00000017772	-	97	77.075	ENSIPUG00000008666	zgc:55733	95	79.186	Ictalurus_punctatus
ENSGACG00000017772	-	82	54.626	ENSSTOG00000012583	RALYL	75	55.804	Ictidomys_tridecemlineatus
ENSGACG00000017772	-	98	77.444	ENSKMAG00000011170	-	86	79.478	Kryptolebias_marmoratus
ENSGACG00000017772	-	96	88.353	ENSKMAG00000018265	-	100	79.331	Kryptolebias_marmoratus
ENSGACG00000017772	-	97	91.633	ENSLBEG00000006193	-	100	82.875	Labrus_bergylta
ENSGACG00000017772	-	99	76.136	ENSLBEG00000006979	-	89	76.515	Labrus_bergylta
ENSGACG00000017772	-	99	72.263	ENSLBEG00000024418	-	90	71.841	Labrus_bergylta
ENSGACG00000017772	-	97	69.884	ENSLOCG00000002560	hnrnpc	92	67.883	Lepisosteus_oculatus
ENSGACG00000017772	-	82	56.744	ENSMNEG00000033288	RALYL	76	54.825	Macaca_nemestrina
ENSGACG00000017772	-	82	56.744	ENSMLEG00000038284	RALYL	76	54.825	Mandrillus_leucophaeus
ENSGACG00000017772	-	98	88.235	ENSMAMG00000008033	-	88	87.843	Mastacembelus_armatus
ENSGACG00000017772	-	96	84.524	ENSMAMG00000012236	-	82	84.615	Mastacembelus_armatus
ENSGACG00000017772	-	97	88.538	ENSMZEG00005024249	-	100	80.606	Maylandia_zebra
ENSGACG00000017772	-	96	78.968	ENSMZEG00005020460	-	92	75.458	Maylandia_zebra
ENSGACG00000017772	-	82	55.066	ENSMAUG00000015149	Ralyl	75	54.867	Mesocricetus_auratus
ENSGACG00000017772	-	83	55.000	ENSMICG00000005558	RALYL	85	70.238	Microcebus_murinus
ENSGACG00000017772	-	82	55.066	ENSMOCG00000017371	Ralyl	74	55.357	Microtus_ochrogaster
ENSGACG00000017772	-	96	88.000	ENSMMOG00000019520	-	100	78.477	Mola_mola
ENSGACG00000017772	-	97	80.632	ENSMMOG00000021465	-	94	80.147	Mola_mola
ENSGACG00000017772	-	97	72.222	ENSMALG00000007520	-	88	72.932	Monopterus_albus
ENSGACG00000017772	-	97	86.508	ENSMALG00000014623	-	85	81.550	Monopterus_albus
ENSGACG00000017772	-	82	55.947	ENSMUSG00000039717	Ralyl	99	71.429	Mus_musculus
ENSGACG00000017772	-	82	55.066	ENSMPUG00000010724	RALYL	75	54.425	Mustela_putorius_furo
ENSGACG00000017772	-	82	55.066	ENSNGAG00000013375	Ralyl	75	54.867	Nannospalax_galili
ENSGACG00000017772	-	97	79.921	ENSNBRG00000004912	-	99	76.955	Neolamprologus_brichardi
ENSGACG00000017772	-	97	88.189	ENSNBRG00000015676	-	100	79.697	Neolamprologus_brichardi
ENSGACG00000017772	-	82	56.744	ENSNLEG00000002702	RALYL	72	54.825	Nomascus_leucogenys
ENSGACG00000017772	-	70	49.744	ENSOPRG00000013650	-	98	48.205	Ochotona_princeps
ENSGACG00000017772	-	82	55.507	ENSODEG00000001012	RALYL	77	53.165	Octodon_degus
ENSGACG00000017772	-	96	80.556	ENSONIG00000007859	-	95	77.338	Oreochromis_niloticus
ENSGACG00000017772	-	97	88.189	ENSONIG00000018350	-	100	80.000	Oreochromis_niloticus
ENSGACG00000017772	-	96	74.603	ENSORLG00000009999	-	87	71.956	Oryzias_latipes
ENSGACG00000017772	-	96	86.770	ENSORLG00000003144	-	100	78.171	Oryzias_latipes
ENSGACG00000017772	-	96	74.206	ENSORLG00020018228	hnrnpc	87	71.587	Oryzias_latipes_hni
ENSGACG00000017772	-	96	74.603	ENSORLG00015019755	-	87	71.956	Oryzias_latipes_hsok
ENSGACG00000017772	-	96	86.770	ENSORLG00015009460	-	100	78.006	Oryzias_latipes_hsok
ENSGACG00000017772	-	96	90.400	ENSOMEG00000022665	-	100	81.707	Oryzias_melastigma
ENSGACG00000017772	-	96	76.190	ENSOMEG00000020488	-	81	75.686	Oryzias_melastigma
ENSGACG00000017772	-	82	56.744	ENSPPAG00000038705	RALYL	76	54.825	Pan_paniscus
ENSGACG00000017772	-	81	58.605	ENSPPRG00000018612	RALYL	74	57.407	Panthera_pardus
ENSGACG00000017772	-	81	58.605	ENSPTIG00000020331	RALYL	74	57.407	Panthera_tigris_altaica
ENSGACG00000017772	-	82	56.744	ENSPTRG00000020381	RALYL	76	54.825	Pan_troglodytes
ENSGACG00000017772	-	82	56.744	ENSPANG00000029305	RALYL	76	54.825	Papio_anubis
ENSGACG00000017772	-	88	81.034	ENSPKIG00000022837	-	82	79.545	Paramormyrops_kingsleyae
ENSGACG00000017772	-	99	76.718	ENSPKIG00000008592	-	100	72.121	Paramormyrops_kingsleyae
ENSGACG00000017772	-	82	54.626	ENSPSIG00000011135	RALYL	74	55.357	Pelodiscus_sinensis
ENSGACG00000017772	-	85	86.878	ENSPMGG00000013144	-	82	85.520	Periophthalmus_magnuspinnatus
ENSGACG00000017772	-	96	67.984	ENSPMGG00000017774	-	94	63.158	Periophthalmus_magnuspinnatus
ENSGACG00000017772	-	82	55.066	ENSPEMG00000016447	Ralyl	75	54.867	Peromyscus_maniculatus_bairdii
ENSGACG00000017772	-	82	53.478	ENSPMAG00000002407	RALYL	99	51.046	Petromyzon_marinus
ENSGACG00000017772	-	99	75.000	ENSPFOG00000001583	-	87	76.753	Poecilia_formosa
ENSGACG00000017772	-	96	89.558	ENSPFOG00000002643	-	100	78.313	Poecilia_formosa
ENSGACG00000017772	-	99	73.881	ENSPLAG00000015305	-	87	75.646	Poecilia_latipinna
ENSGACG00000017772	-	96	89.558	ENSPLAG00000000061	-	100	79.217	Poecilia_latipinna
ENSGACG00000017772	-	99	76.952	ENSPMEG00000004802	-	87	76.753	Poecilia_mexicana
ENSGACG00000017772	-	96	88.755	ENSPMEG00000016524	-	100	78.012	Poecilia_mexicana
ENSGACG00000017772	-	96	88.755	ENSPREG00000001852	-	86	86.770	Poecilia_reticulata
ENSGACG00000017772	-	96	76.587	ENSPREG00000007928	-	87	75.277	Poecilia_reticulata
ENSGACG00000017772	-	82	46.226	ENSPPYG00000018710	-	66	68.571	Pongo_abelii
ENSGACG00000017772	-	86	52.521	ENSPVAG00000010821	RALYL	78	52.941	Pteropus_vampyrus
ENSGACG00000017772	-	97	79.528	ENSPNYG00000020293	-	91	78.598	Pundamilia_nyererei
ENSGACG00000017772	-	97	88.189	ENSPNYG00000003747	-	87	86.538	Pundamilia_nyererei
ENSGACG00000017772	-	91	78.903	ENSPNAG00000015686	hnrnpc	89	78.277	Pygocentrus_nattereri
ENSGACG00000017772	-	93	74.390	ENSPNAG00000019200	zgc:55733	83	74.131	Pygocentrus_nattereri
ENSGACG00000017772	-	82	56.744	ENSRROG00000023925	RALYL	87	68.605	Rhinopithecus_roxellana
ENSGACG00000017772	-	97	75.573	ENSSFOG00015012924	-	81	92.500	Scleropages_formosus
ENSGACG00000017772	-	97	75.581	ENSSFOG00015012015	-	82	83.410	Scleropages_formosus
ENSGACG00000017772	-	96	78.884	ENSSMAG00000013592	-	85	78.810	Scophthalmus_maximus
ENSGACG00000017772	-	97	89.723	ENSSMAG00000011147	-	100	79.580	Scophthalmus_maximus
ENSGACG00000017772	-	98	82.558	ENSSDUG00000001723	-	83	83.462	Seriola_dumerili
ENSGACG00000017772	-	97	84.921	ENSSDUG00000006730	-	100	76.261	Seriola_dumerili
ENSGACG00000017772	-	98	82.946	ENSSLDG00000007454	-	84	83.846	Seriola_lalandi_dorsalis
ENSGACG00000017772	-	97	84.921	ENSSLDG00000007474	-	89	85.271	Seriola_lalandi_dorsalis
ENSGACG00000017772	-	51	70.968	ENSSARG00000002374	RALYL	57	70.968	Sorex_araneus
ENSGACG00000017772	-	97	91.633	ENSSPAG00000013996	-	100	80.243	Stegastes_partitus
ENSGACG00000017772	-	98	81.203	ENSSPAG00000023204	-	83	84.231	Stegastes_partitus
ENSGACG00000017772	-	93	50.196	ENSTGUG00000011689	RALYL	78	53.879	Taeniopygia_guttata
ENSGACG00000017772	-	97	81.746	ENSTRUG00000020158	-	88	79.554	Takifugu_rubripes
ENSGACG00000017772	-	97	76.953	ENSTNIG00000007427	-	88	75.735	Tetraodon_nigroviridis
ENSGACG00000017772	-	96	77.291	ENSTNIG00000000334	-	95	75.758	Tetraodon_nigroviridis
ENSGACG00000017772	-	82	47.111	ENSTBEG00000005551	RALYL	88	47.034	Tupaia_belangeri
ENSGACG00000017772	-	82	52.212	ENSTTRG00000015762	RALYL	73	53.456	Tursiops_truncatus
ENSGACG00000017772	-	82	52.315	ENSVPAG00000008501	RALYL	73	53.271	Vicugna_pacos
ENSGACG00000017772	-	99	70.741	ENSXCOG00000006552	-	86	70.370	Xiphophorus_couchianus
ENSGACG00000017772	-	60	86.503	ENSXCOG00000019434	-	92	76.018	Xiphophorus_couchianus
ENSGACG00000017772	-	96	88.755	ENSXMAG00000022849	-	83	86.770	Xiphophorus_maculatus
ENSGACG00000017772	-	99	75.836	ENSXMAG00000009333	-	87	74.539	Xiphophorus_maculatus