EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017832 (Gene tree)
Gene ID: -
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2694 bases
Position: chrgroupIV:9321238-9323931
Accession: ZDB-GENE-030131-5306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023566	Clp1	PF06807.14	1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000023612	-	1394	-	ENSGACP00000023566	441 (aa)	-	G3Q118

Gene Model

Click here to download ENSGACG00000017832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017832's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017832	clp1	99	76.552	ENSG00000172409	CLP1	99	77.030	Homo_sapiens
ENSGACG00000017832	clp1	100	96.372	ENSAPOG00000008242	clp1	100	96.372	Acanthochromis_polyacanthus
ENSGACG00000017832	clp1	99	76.092	ENSAMEG00000014551	CLP1	99	76.092	Ailuropoda_melanoleuca
ENSGACG00000017832	clp1	100	95.465	ENSACIG00000006310	clp1	99	95.465	Amphilophus_citrinellus
ENSGACG00000017832	clp1	100	96.372	ENSAOCG00000010681	clp1	100	96.372	Amphiprion_ocellaris
ENSGACG00000017832	clp1	100	96.372	ENSAPEG00000012165	clp1	99	97.418	Amphiprion_percula
ENSGACG00000017832	clp1	100	96.372	ENSATEG00000012374	clp1	100	96.372	Anabas_testudineus
ENSGACG00000017832	clp1	98	76.157	ENSACAG00000007139	CLP1	99	76.157	Anolis_carolinensis
ENSGACG00000017832	clp1	99	76.552	ENSANAG00000034935	CLP1	99	77.030	Aotus_nancymaae
ENSGACG00000017832	clp1	100	96.145	ENSACLG00000013573	clp1	100	96.145	Astatotilapia_calliptera
ENSGACG00000017832	clp1	95	87.736	ENSAMXG00000014194	clp1	98	87.736	Astyanax_mexicanus
ENSGACG00000017832	clp1	98	76.566	ENSBTAG00000006493	CLP1	99	76.566	Bos_taurus
ENSGACG00000017832	clp1	95	47.281	WBGene00010304	clpf-1	97	47.281	Caenorhabditis_elegans
ENSGACG00000017832	clp1	99	76.552	ENSCJAG00000008748	CLP1	99	77.030	Callithrix_jacchus
ENSGACG00000017832	clp1	98	76.566	ENSCAFG00000007815	CLP1	99	76.566	Canis_familiaris
ENSGACG00000017832	clp1	98	76.566	ENSCAFG00020000903	CLP1	99	76.566	Canis_lupus_dingo
ENSGACG00000017832	clp1	98	76.566	ENSCHIG00000023497	CLP1	99	76.566	Capra_hircus
ENSGACG00000017832	clp1	99	76.322	ENSTSYG00000006824	CLP1	99	76.322	Carlito_syrichta
ENSGACG00000017832	clp1	96	77.594	ENSCAPG00000009703	CLP1	98	77.594	Cavia_aperea
ENSGACG00000017832	clp1	96	77.594	ENSCPOG00000012554	CLP1	99	77.594	Cavia_porcellus
ENSGACG00000017832	clp1	98	76.798	ENSCCAG00000031957	CLP1	99	76.798	Cebus_capucinus
ENSGACG00000017832	clp1	100	75.510	ENSCATG00000044628	CLP1	99	77.030	Cercocebus_atys
ENSGACG00000017832	clp1	98	76.798	ENSCLAG00000004094	CLP1	99	76.798	Chinchilla_lanigera
ENSGACG00000017832	clp1	98	77.030	ENSCSAG00000005994	CLP1	99	77.030	Chlorocebus_sabaeus
ENSGACG00000017832	clp1	98	75.926	ENSCPBG00000016843	CLP1	99	75.926	Chrysemys_picta_bellii
ENSGACG00000017832	clp1	98	61.717	ENSCING00000003779	-	98	61.717	Ciona_intestinalis
ENSGACG00000017832	clp1	98	61.949	ENSCSAVG00000003437	-	99	61.949	Ciona_savignyi
ENSGACG00000017832	clp1	99	76.552	ENSCANG00000034335	CLP1	99	77.030	Colobus_angolensis_palliatus
ENSGACG00000017832	clp1	98	76.389	ENSCGRG00001002227	CLP1	99	76.389	Cricetulus_griseus_chok1gshd
ENSGACG00000017832	clp1	98	76.389	ENSCGRG00000004328	CLP1	99	76.389	Cricetulus_griseus_crigri
ENSGACG00000017832	clp1	100	92.744	ENSCSEG00000008614	clp1	100	92.744	Cynoglossus_semilaevis
ENSGACG00000017832	clp1	100	93.197	ENSCVAG00000020101	clp1	100	93.197	Cyprinodon_variegatus
ENSGACG00000017832	clp1	95	87.441	ENSDARG00000063663	clp1	95	86.854	Danio_rerio
ENSGACG00000017832	clp1	98	76.512	ENSDNOG00000042415	CLP1	89	76.512	Dasypus_novemcinctus
ENSGACG00000017832	clp1	99	75.744	ENSDORG00000014685	Clp1	99	75.744	Dipodomys_ordii
ENSGACG00000017832	clp1	95	54.545	FBgn0033842	cbc	97	54.545	Drosophila_melanogaster
ENSGACG00000017832	clp1	98	76.798	ENSETEG00000003009	CLP1	99	76.798	Echinops_telfairi
ENSGACG00000017832	clp1	96	65.728	ENSEBUG00000011648	clp1	98	65.728	Eptatretus_burgeri
ENSGACG00000017832	clp1	98	77.030	ENSEASG00005002093	CLP1	99	77.030	Equus_asinus_asinus
ENSGACG00000017832	clp1	99	76.552	ENSECAG00000011597	CLP1	99	77.030	Equus_caballus
ENSGACG00000017832	clp1	96	77.123	ENSEEUG00000012771	CLP1	98	77.123	Erinaceus_europaeus
ENSGACG00000017832	clp1	95	88.915	ENSELUG00000024048	clp1	100	86.323	Esox_lucius
ENSGACG00000017832	clp1	99	76.092	ENSFCAG00000006633	CLP1	99	76.566	Felis_catus
ENSGACG00000017832	clp1	100	75.057	ENSFALG00000011145	CLP1	100	75.057	Ficedula_albicollis
ENSGACG00000017832	clp1	98	76.798	ENSFDAG00000000234	CLP1	99	76.798	Fukomys_damarensis
ENSGACG00000017832	clp1	100	93.878	ENSFHEG00000014760	CLP1	100	93.878	Fundulus_heteroclitus
ENSGACG00000017832	clp1	100	90.249	ENSGMOG00000019340	clp1	100	90.249	Gadus_morhua
ENSGACG00000017832	clp1	96	76.887	ENSGALG00000007370	CLP1	98	76.887	Gallus_gallus
ENSGACG00000017832	clp1	100	93.197	ENSGAFG00000003020	clp1	100	93.197	Gambusia_affinis
ENSGACG00000017832	clp1	98	75.926	ENSGAGG00000013279	CLP1	99	75.926	Gopherus_agassizii
ENSGACG00000017832	clp1	99	76.552	ENSGGOG00000023006	CLP1	99	77.030	Gorilla_gorilla
ENSGACG00000017832	clp1	100	96.372	ENSHBUG00000010436	clp1	100	96.372	Haplochromis_burtoni
ENSGACG00000017832	clp1	98	76.798	ENSHGLG00000009914	CLP1	99	76.798	Heterocephalus_glaber_female
ENSGACG00000017832	clp1	98	76.798	ENSHGLG00100006105	CLP1	99	76.798	Heterocephalus_glaber_male
ENSGACG00000017832	clp1	100	95.238	ENSHCOG00000010072	clp1	100	95.238	Hippocampus_comes
ENSGACG00000017832	clp1	95	87.470	ENSIPUG00000016238	clp1	99	83.742	Ictalurus_punctatus
ENSGACG00000017832	clp1	98	76.798	ENSSTOG00000029257	CLP1	99	76.798	Ictidomys_tridecemlineatus
ENSGACG00000017832	clp1	98	76.334	ENSJJAG00000023691	Clp1	99	76.334	Jaculus_jaculus
ENSGACG00000017832	clp1	100	93.424	ENSKMAG00000011990	clp1	100	93.424	Kryptolebias_marmoratus
ENSGACG00000017832	clp1	100	96.145	ENSLBEG00000010201	clp1	100	96.145	Labrus_bergylta
ENSGACG00000017832	clp1	96	75.472	ENSLACG00000003160	CLP1	98	75.472	Latimeria_chalumnae
ENSGACG00000017832	clp1	71	86.646	ENSLOCG00000008074	clp1	100	87.037	Lepisosteus_oculatus
ENSGACG00000017832	clp1	98	76.566	ENSLAFG00000014907	CLP1	99	76.566	Loxodonta_africana
ENSGACG00000017832	clp1	99	76.552	ENSMFAG00000046074	CLP1	99	77.030	Macaca_fascicularis
ENSGACG00000017832	clp1	99	76.552	ENSMMUG00000038007	CLP1	99	76.552	Macaca_mulatta
ENSGACG00000017832	clp1	98	77.030	ENSMNEG00000000259	CLP1	99	77.030	Macaca_nemestrina
ENSGACG00000017832	clp1	99	76.552	ENSMLEG00000043556	CLP1	99	77.030	Mandrillus_leucophaeus
ENSGACG00000017832	clp1	100	95.465	ENSMAMG00000002149	clp1	100	95.465	Mastacembelus_armatus
ENSGACG00000017832	clp1	100	96.145	ENSMZEG00005002850	clp1	100	96.145	Maylandia_zebra
ENSGACG00000017832	clp1	96	76.887	ENSMGAG00000009643	CLP1	98	76.887	Meleagris_gallopavo
ENSGACG00000017832	clp1	98	75.926	ENSMAUG00000016261	Clp1	99	75.926	Mesocricetus_auratus
ENSGACG00000017832	clp1	99	75.854	ENSMICG00000004895	CLP1	99	76.566	Microcebus_murinus
ENSGACG00000017832	clp1	98	76.620	ENSMOCG00000005498	Clp1	99	76.620	Microtus_ochrogaster
ENSGACG00000017832	clp1	100	94.331	ENSMMOG00000003229	clp1	100	94.331	Mola_mola
ENSGACG00000017832	clp1	99	76.092	ENSMODG00000020107	-	99	76.092	Monodelphis_domestica
ENSGACG00000017832	clp1	99	76.092	ENSMODG00000024148	-	99	76.092	Monodelphis_domestica
ENSGACG00000017832	clp1	100	94.558	ENSMALG00000014239	clp1	100	94.558	Monopterus_albus
ENSGACG00000017832	clp1	98	76.389	MGP_CAROLIEiJ_G0023726	Clp1	99	76.389	Mus_caroli
ENSGACG00000017832	clp1	98	76.389	ENSMUSG00000027079	Clp1	99	76.389	Mus_musculus
ENSGACG00000017832	clp1	98	76.157	MGP_PahariEiJ_G0025177	Clp1	99	76.157	Mus_pahari
ENSGACG00000017832	clp1	98	76.389	MGP_SPRETEiJ_G0024646	Clp1	99	76.389	Mus_spretus
ENSGACG00000017832	clp1	98	76.566	ENSMPUG00000000268	CLP1	99	76.566	Mustela_putorius_furo
ENSGACG00000017832	clp1	98	77.030	ENSMLUG00000007904	CLP1	99	77.030	Myotis_lucifugus
ENSGACG00000017832	clp1	98	76.334	ENSNGAG00000006165	Clp1	99	76.334	Nannospalax_galili
ENSGACG00000017832	clp1	100	95.918	ENSNBRG00000005225	clp1	100	95.918	Neolamprologus_brichardi
ENSGACG00000017832	clp1	80	70.703	ENSNLEG00000012809	-	99	70.703	Nomascus_leucogenys
ENSGACG00000017832	clp1	99	76.092	ENSMEUG00000010949	CLP1	99	76.092	Notamacropus_eugenii
ENSGACG00000017832	clp1	69	78.548	ENSOPRG00000007329	CLP1	100	78.548	Ochotona_princeps
ENSGACG00000017832	clp1	98	76.798	ENSODEG00000011410	CLP1	99	76.798	Octodon_degus
ENSGACG00000017832	clp1	100	95.692	ENSONIG00000005089	clp1	100	95.692	Oreochromis_niloticus
ENSGACG00000017832	clp1	98	76.798	ENSOCUG00000007045	CLP1	99	76.798	Oryctolagus_cuniculus
ENSGACG00000017832	clp1	100	93.197	ENSORLG00000003647	clp1	100	93.197	Oryzias_latipes
ENSGACG00000017832	clp1	100	92.971	ENSORLG00020016676	clp1	100	92.971	Oryzias_latipes_hni
ENSGACG00000017832	clp1	100	93.197	ENSORLG00015019484	clp1	100	93.197	Oryzias_latipes_hsok
ENSGACG00000017832	clp1	100	92.744	ENSOMEG00000021303	clp1	100	92.744	Oryzias_melastigma
ENSGACG00000017832	clp1	98	76.566	ENSOGAG00000004508	CLP1	99	76.566	Otolemur_garnettii
ENSGACG00000017832	clp1	98	75.638	ENSOARG00000010145	CLP1	98	75.638	Ovis_aries
ENSGACG00000017832	clp1	99	76.552	ENSPPAG00000041519	CLP1	99	77.030	Pan_paniscus
ENSGACG00000017832	clp1	98	76.566	ENSPPRG00000006135	CLP1	99	76.566	Panthera_pardus
ENSGACG00000017832	clp1	98	76.566	ENSPTIG00000015866	CLP1	99	76.566	Panthera_tigris_altaica
ENSGACG00000017832	clp1	98	77.030	ENSPTRG00000047318	CLP1	99	77.030	Pan_troglodytes
ENSGACG00000017832	clp1	99	76.552	ENSPANG00000017078	CLP1	98	76.552	Papio_anubis
ENSGACG00000017832	clp1	100	85.843	ENSPKIG00000007697	clp1	100	85.843	Paramormyrops_kingsleyae
ENSGACG00000017832	clp1	93	73.350	ENSPSIG00000005468	CLP1	99	73.350	Pelodiscus_sinensis
ENSGACG00000017832	clp1	100	93.878	ENSPMGG00000012171	clp1	100	93.878	Periophthalmus_magnuspinnatus
ENSGACG00000017832	clp1	98	76.620	ENSPEMG00000011213	-	99	76.620	Peromyscus_maniculatus_bairdii
ENSGACG00000017832	clp1	95	67.933	ENSPMAG00000006707	clp1	97	67.933	Petromyzon_marinus
ENSGACG00000017832	clp1	99	76.322	ENSPCIG00000011899	CLP1	99	76.322	Phascolarctos_cinereus
ENSGACG00000017832	clp1	100	93.651	ENSPFOG00000008169	clp1	100	93.651	Poecilia_formosa
ENSGACG00000017832	clp1	100	93.651	ENSPLAG00000022388	clp1	100	93.651	Poecilia_latipinna
ENSGACG00000017832	clp1	100	93.651	ENSPMEG00000021088	clp1	100	93.651	Poecilia_mexicana
ENSGACG00000017832	clp1	100	93.651	ENSPREG00000017802	clp1	100	93.651	Poecilia_reticulata
ENSGACG00000017832	clp1	52	75.546	ENSPPYG00000003266	-	100	75.546	Pongo_abelii
ENSGACG00000017832	clp1	99	76.092	ENSPCOG00000000360	CLP1	99	76.092	Propithecus_coquereli
ENSGACG00000017832	clp1	98	76.566	ENSPVAG00000016270	CLP1	99	76.566	Pteropus_vampyrus
ENSGACG00000017832	clp1	100	96.372	ENSPNYG00000017274	clp1	99	96.372	Pundamilia_nyererei
ENSGACG00000017832	clp1	100	85.268	ENSPNAG00000026460	clp1	100	85.938	Pygocentrus_nattereri
ENSGACG00000017832	clp1	98	76.389	ENSRNOG00000007416	Clp1	99	76.389	Rattus_norvegicus
ENSGACG00000017832	clp1	98	77.030	ENSRBIG00000018191	CLP1	99	77.030	Rhinopithecus_bieti
ENSGACG00000017832	clp1	99	76.552	ENSRROG00000039265	CLP1	99	77.030	Rhinopithecus_roxellana
ENSGACG00000017832	clp1	94	62.802	ENSSBOG00000010558	-	93	62.802	Saimiri_boliviensis_boliviensis
ENSGACG00000017832	clp1	98	77.030	ENSSBOG00000032517	-	99	77.030	Saimiri_boliviensis_boliviensis
ENSGACG00000017832	clp1	99	76.322	ENSSHAG00000015695	CLP1	99	76.322	Sarcophilus_harrisii
ENSGACG00000017832	clp1	100	84.547	ENSSFOG00015000628	clp1	100	84.989	Scleropages_formosus
ENSGACG00000017832	clp1	100	96.372	ENSSMAG00000019423	clp1	99	96.372	Scophthalmus_maximus
ENSGACG00000017832	clp1	100	97.052	ENSSDUG00000014495	clp1	100	97.052	Seriola_dumerili
ENSGACG00000017832	clp1	100	96.825	ENSSLDG00000000937	clp1	100	96.825	Seriola_lalandi_dorsalis
ENSGACG00000017832	clp1	52	75.439	ENSSARG00000002459	CLP1	100	75.439	Sorex_araneus
ENSGACG00000017832	clp1	98	75.231	ENSSPUG00000016811	CLP1	99	75.231	Sphenodon_punctatus
ENSGACG00000017832	clp1	100	96.145	ENSSPAG00000016052	clp1	100	96.145	Stegastes_partitus
ENSGACG00000017832	clp1	98	76.566	ENSSSCG00000031442	CLP1	99	76.566	Sus_scrofa
ENSGACG00000017832	clp1	100	75.057	ENSTGUG00000007002	CLP1	100	75.057	Taeniopygia_guttata
ENSGACG00000017832	clp1	100	91.383	ENSTRUG00000012602	clp1	100	91.383	Takifugu_rubripes
ENSGACG00000017832	clp1	100	90.249	ENSTNIG00000013125	clp1	100	90.249	Tetraodon_nigroviridis
ENSGACG00000017832	clp1	99	75.286	ENSTBEG00000009975	CLP1	99	75.286	Tupaia_belangeri
ENSGACG00000017832	clp1	98	76.566	ENSTTRG00000002096	CLP1	99	76.566	Tursiops_truncatus
ENSGACG00000017832	clp1	98	76.566	ENSUAMG00000011388	CLP1	99	76.566	Ursus_americanus
ENSGACG00000017832	clp1	98	76.566	ENSUMAG00000018317	CLP1	99	76.566	Ursus_maritimus
ENSGACG00000017832	clp1	100	75.283	ENSVVUG00000017138	CLP1	99	75.283	Vulpes_vulpes
ENSGACG00000017832	clp1	98	70.814	ENSXETG00000007088	clp1	99	71.041	Xenopus_tropicalis
ENSGACG00000017832	clp1	100	93.424	ENSXCOG00000002287	clp1	100	93.424	Xiphophorus_couchianus
ENSGACG00000017832	clp1	100	93.424	ENSXMAG00000009783	clp1	100	93.424	Xiphophorus_maculatus