EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017855 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6841 bases
Position: chrgroupIII:16233544-16240384
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023592	RRM_1	PF00076.22	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000023638	-	1921	-	ENSGACP00000023592	456 (aa)	-	G3Q144

Gene Model

Click here to download ENSGACG00000017855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017855	-	99	83.442	ENSAPOG00000004488	-	100	84.096	Acanthochromis_polyacanthus
ENSGACG00000017855	-	67	86.319	ENSACIG00000018075	-	79	98.824	Amphilophus_citrinellus
ENSGACG00000017855	-	81	30.995	ENSAOCG00000024379	srek1	96	31.057	Amphiprion_ocellaris
ENSGACG00000017855	-	99	83.224	ENSAPEG00000003619	SRSF11	100	83.878	Amphiprion_percula
ENSGACG00000017855	-	76	31.100	ENSATEG00000009450	srek1	50	31.980	Anabas_testudineus
ENSGACG00000017855	-	99	79.258	ENSATEG00000007534	-	100	78.166	Anabas_testudineus
ENSGACG00000017855	-	55	68.519	ENSAPLG00000003948	-	99	39.356	Anas_platyrhynchos
ENSGACG00000017855	-	99	75.930	ENSACLG00000019647	-	100	80.610	Astatotilapia_calliptera
ENSGACG00000017855	-	99	68.230	ENSAMXG00000008655	-	100	65.458	Astyanax_mexicanus
ENSGACG00000017855	-	75	74.057	ENSCJAG00000017704	SRSF11	94	51.674	Callithrix_jacchus
ENSGACG00000017855	-	68	73.585	ENSCHIG00000025295	SRSF11	75	75.000	Capra_hircus
ENSGACG00000017855	-	97	75.166	ENSCSEG00000010721	-	100	76.242	Cynoglossus_semilaevis
ENSGACG00000017855	-	99	63.519	ENSCVAG00000010634	-	100	62.955	Cyprinodon_variegatus
ENSGACG00000017855	-	99	75.983	ENSCVAG00000006934	-	100	78.355	Cyprinodon_variegatus
ENSGACG00000017855	-	91	34.517	ENSDARG00000009764	srek1	54	40.647	Danio_rerio
ENSGACG00000017855	-	63	49.502	ENSEBUG00000014055	srsf11	85	44.412	Eptatretus_burgeri
ENSGACG00000017855	-	99	66.527	ENSELUG00000021268	-	100	67.573	Esox_lucius
ENSGACG00000017855	-	99	60.851	ENSFHEG00000003732	SRSF11	100	58.511	Fundulus_heteroclitus
ENSGACG00000017855	-	99	74.026	ENSFHEG00000013348	-	100	81.210	Fundulus_heteroclitus
ENSGACG00000017855	-	99	62.447	ENSGMOG00000015896	srsf11	100	65.063	Gadus_morhua
ENSGACG00000017855	-	99	71.491	ENSGMOG00000002255	-	99	75.439	Gadus_morhua
ENSGACG00000017855	-	100	75.163	ENSGAFG00000021415	SRSF11	85	78.742	Gambusia_affinis
ENSGACG00000017855	-	61	40.443	ENSGAGG00000006087	SREK1	62	69.136	Gopherus_agassizii
ENSGACG00000017855	-	99	75.930	ENSHBUG00000007092	-	100	80.610	Haplochromis_burtoni
ENSGACG00000017855	-	99	52.966	ENSHGLG00000008682	SRSF11	95	56.897	Heterocephalus_glaber_female
ENSGACG00000017855	-	99	52.754	ENSHGLG00100018382	SRSF11	99	57.792	Heterocephalus_glaber_male
ENSGACG00000017855	-	65	78.188	ENSHCOG00000019035	-	91	73.966	Hippocampus_comes
ENSGACG00000017855	-	99	66.091	ENSIPUG00000010929	-	97	64.795	Ictalurus_punctatus
ENSGACG00000017855	-	86	37.628	ENSIPUG00000016851	srek1	55	42.403	Ictalurus_punctatus
ENSGACG00000017855	-	99	81.957	ENSKMAG00000005868	-	100	80.736	Kryptolebias_marmoratus
ENSGACG00000017855	-	99	60.000	ENSKMAG00000009775	srsf11	100	65.612	Kryptolebias_marmoratus
ENSGACG00000017855	-	66	78.261	ENSLBEG00000012466	-	70	87.829	Labrus_bergylta
ENSGACG00000017855	-	99	80.870	ENSMAMG00000015002	-	100	78.166	Mastacembelus_armatus
ENSGACG00000017855	-	99	75.930	ENSMZEG00005025071	-	100	80.610	Maylandia_zebra
ENSGACG00000017855	-	98	77.876	ENSMMOG00000016751	-	100	78.775	Mola_mola
ENSGACG00000017855	-	99	71.645	ENSMALG00000020833	-	100	77.657	Monopterus_albus
ENSGACG00000017855	-	99	56.660	ENSMLUG00000026338	-	94	58.017	Myotis_lucifugus
ENSGACG00000017855	-	99	75.711	ENSNBRG00000012193	-	100	80.610	Neolamprologus_brichardi
ENSGACG00000017855	-	99	75.328	ENSONIG00000009591	-	100	81.720	Oreochromis_niloticus
ENSGACG00000017855	-	99	47.162	ENSOCUG00000002001	-	96	54.298	Oryctolagus_cuniculus
ENSGACG00000017855	-	99	51.717	ENSOCUG00000025440	-	96	51.940	Oryctolagus_cuniculus
ENSGACG00000017855	-	99	52.431	ENSOCUG00000024114	-	96	51.940	Oryctolagus_cuniculus
ENSGACG00000017855	-	99	68.017	ENSORLG00000007753	srsf11	100	66.951	Oryzias_latipes
ENSGACG00000017855	-	86	73.300	ENSORLG00020009393	-	76	97.647	Oryzias_latipes_hni
ENSGACG00000017855	-	99	67.728	ENSORLG00020016204	srsf11	100	66.879	Oryzias_latipes_hni
ENSGACG00000017855	-	86	73.300	ENSORLG00015009374	-	76	97.647	Oryzias_latipes_hsok
ENSGACG00000017855	-	99	67.377	ENSORLG00015011944	srsf11	100	64.756	Oryzias_latipes_hsok
ENSGACG00000017855	-	56	31.351	ENSOMEG00000015817	srek1	98	30.210	Oryzias_melastigma
ENSGACG00000017855	-	99	77.273	ENSOMEG00000006172	-	100	77.124	Oryzias_melastigma
ENSGACG00000017855	-	75	74.057	ENSPTRG00000000852	SRSF11	94	57.328	Pan_troglodytes
ENSGACG00000017855	-	82	37.551	ENSPKIG00000025563	srek1	82	38.318	Paramormyrops_kingsleyae
ENSGACG00000017855	-	99	56.549	ENSPCIG00000002083	SRSF11	92	57.419	Phascolarctos_cinereus
ENSGACG00000017855	-	99	76.201	ENSPFOG00000014895	-	100	78.696	Poecilia_formosa
ENSGACG00000017855	-	99	75.983	ENSPLAG00000009484	-	100	78.478	Poecilia_latipinna
ENSGACG00000017855	-	99	76.419	ENSPMEG00000023453	-	100	78.913	Poecilia_mexicana
ENSGACG00000017855	-	99	75.983	ENSPREG00000009065	SRSF11	100	78.478	Poecilia_reticulata
ENSGACG00000017855	-	99	58.526	ENSPCOG00000025365	SRSF11	93	57.050	Propithecus_coquereli
ENSGACG00000017855	-	99	75.930	ENSPNYG00000014732	-	100	80.610	Pundamilia_nyererei
ENSGACG00000017855	-	77	65.854	ENSPNAG00000004328	srek1	93	36.811	Pygocentrus_nattereri
ENSGACG00000017855	-	99	57.261	ENSSHAG00000012111	SRSF11	98	57.725	Sarcophilus_harrisii
ENSGACG00000017855	-	83	36.714	ENSSFOG00015004995	srek1	91	35.294	Scleropages_formosus
ENSGACG00000017855	-	99	61.875	ENSSFOG00015014887	srsf11	100	63.048	Scleropages_formosus
ENSGACG00000017855	-	99	82.609	ENSSMAG00000019897	-	100	82.112	Scophthalmus_maximus
ENSGACG00000017855	-	94	36.505	ENSSMAG00000011808	srek1	58	42.806	Scophthalmus_maximus
ENSGACG00000017855	-	99	83.261	ENSSDUG00000018738	-	100	84.416	Seriola_dumerili
ENSGACG00000017855	-	86	81.407	ENSSLDG00000012105	-	97	82.750	Seriola_lalandi_dorsalis
ENSGACG00000017855	-	99	82.789	ENSSPAG00000016483	-	100	83.442	Stegastes_partitus
ENSGACG00000017855	-	68	37.406	ENSTNIG00000013463	srek1	70	41.993	Tetraodon_nigroviridis
ENSGACG00000017855	-	99	68.737	ENSTNIG00000008514	-	100	67.382	Tetraodon_nigroviridis
ENSGACG00000017855	-	99	56.061	ENSTTRG00000015054	SRSF11	94	56.399	Tursiops_truncatus
ENSGACG00000017855	-	99	75.983	ENSXMAG00000019180	SRSF11	100	78.478	Xiphophorus_maculatus