EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000017878 (Gene tree)
Gene ID: -
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA-binding family member 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 8234 bases
Position: chrgroupXIV:10212476-10220709
Accession: ZDB-GENE-030131-9808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023628	CPL	PF08144.11	3.5e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000023674	-	1968	-	ENSGACP00000023628	546 (aa)	-	G3Q180

Gene Model

Click here to download ENSGACG00000017878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000017878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000017878	pum3	96	60.911	ENSG00000080608	PUM3	82	60.788	Homo_sapiens
ENSGACG00000017878	pum3	99	83.088	ENSAPOG00000020252	pum3	84	83.088	Acanthochromis_polyacanthus
ENSGACG00000017878	pum3	96	60.762	ENSAMEG00000012187	PUM3	82	60.640	Ailuropoda_melanoleuca
ENSGACG00000017878	pum3	99	77.289	ENSACIG00000009786	pum3	91	77.289	Amphilophus_citrinellus
ENSGACG00000017878	pum3	99	82.904	ENSAOCG00000004439	pum3	84	82.904	Amphiprion_ocellaris
ENSGACG00000017878	pum3	99	83.088	ENSAPEG00000020523	pum3	84	83.088	Amphiprion_percula
ENSGACG00000017878	pum3	99	85.294	ENSATEG00000005799	pum3	85	85.294	Anabas_testudineus
ENSGACG00000017878	pum3	97	62.075	ENSAPLG00000002920	PUM3	86	62.030	Anas_platyrhynchos
ENSGACG00000017878	pum3	87	63.002	ENSACAG00000003174	PUM3	83	61.963	Anolis_carolinensis
ENSGACG00000017878	pum3	96	61.217	ENSANAG00000024520	PUM3	82	60.976	Aotus_nancymaae
ENSGACG00000017878	pum3	99	79.963	ENSACLG00000001017	pum3	84	79.963	Astatotilapia_calliptera
ENSGACG00000017878	pum3	97	70.865	ENSAMXG00000020911	pum3	84	70.865	Astyanax_mexicanus
ENSGACG00000017878	pum3	97	60.189	ENSBTAG00000013357	PUM3	82	60.150	Bos_taurus
ENSGACG00000017878	pum3	94	30.077	WBGene00014165	puf-12	67	30.077	Caenorhabditis_elegans
ENSGACG00000017878	pum3	96	60.531	ENSCJAG00000010917	PUM3	82	60.413	Callithrix_jacchus
ENSGACG00000017878	pum3	96	60.381	ENSCAFG00000002035	PUM3	82	60.264	Canis_familiaris
ENSGACG00000017878	pum3	96	60.381	ENSCAFG00020026867	PUM3	82	60.264	Canis_lupus_dingo
ENSGACG00000017878	pum3	97	60.943	ENSCHIG00000021559	PUM3	82	60.902	Capra_hircus
ENSGACG00000017878	pum3	97	59.434	ENSTSYG00000007481	PUM3	82	59.398	Carlito_syrichta
ENSGACG00000017878	pum3	96	58.935	ENSCAPG00000010592	-	82	58.835	Cavia_aperea
ENSGACG00000017878	pum3	97	60.526	ENSCPOG00000008552	-	82	60.526	Cavia_porcellus
ENSGACG00000017878	pum3	96	60.721	ENSCCAG00000032650	PUM3	82	60.600	Cebus_capucinus
ENSGACG00000017878	pum3	97	60.943	ENSCATG00000024880	PUM3	82	60.902	Cercocebus_atys
ENSGACG00000017878	pum3	96	61.101	ENSCLAG00000011892	PUM3	82	60.976	Chinchilla_lanigera
ENSGACG00000017878	pum3	96	60.911	ENSCSAG00000008691	PUM3	82	60.788	Chlorocebus_sabaeus
ENSGACG00000017878	pum3	91	49.499	ENSCHOG00000002535	PUM3	73	49.499	Choloepus_hoffmanni
ENSGACG00000017878	pum3	95	61.464	ENSCPBG00000025470	PUM3	79	60.902	Chrysemys_picta_bellii
ENSGACG00000017878	pum3	93	37.911	ENSCING00000024199	-	91	37.911	Ciona_intestinalis
ENSGACG00000017878	pum3	94	39.544	ENSCSAVG00000006072	-	99	38.857	Ciona_savignyi
ENSGACG00000017878	pum3	96	60.911	ENSCANG00000006142	PUM3	82	60.788	Colobus_angolensis_palliatus
ENSGACG00000017878	pum3	96	59.886	ENSCGRG00001016402	Pum3	82	59.774	Cricetulus_griseus_chok1gshd
ENSGACG00000017878	pum3	96	59.886	ENSCGRG00000010207	Pum3	82	59.774	Cricetulus_griseus_crigri
ENSGACG00000017878	pum3	86	81.568	ENSCSEG00000001565	pum3	82	81.568	Cynoglossus_semilaevis
ENSGACG00000017878	pum3	62	71.852	ENSCVAG00000006550	pum3	78	71.852	Cyprinodon_variegatus
ENSGACG00000017878	pum3	97	69.549	ENSDARG00000087779	pum3	85	69.549	Danio_rerio
ENSGACG00000017878	pum3	96	51.803	ENSDNOG00000008157	PUM3	57	51.782	Dasypus_novemcinctus
ENSGACG00000017878	pum3	96	60.646	ENSETEG00000015331	PUM3	82	60.640	Echinops_telfairi
ENSGACG00000017878	pum3	92	40.154	ENSEBUG00000011586	pum3	77	40.154	Eptatretus_burgeri
ENSGACG00000017878	pum3	95	61.154	ENSEASG00005010350	PUM3	82	60.600	Equus_asinus_asinus
ENSGACG00000017878	pum3	95	61.154	ENSECAG00000017193	PUM3	82	60.600	Equus_caballus
ENSGACG00000017878	pum3	88	53.623	ENSEEUG00000010314	PUM3	81	53.579	Erinaceus_europaeus
ENSGACG00000017878	pum3	97	70.489	ENSELUG00000002215	pum3	83	70.489	Esox_lucius
ENSGACG00000017878	pum3	97	61.466	ENSFALG00000010509	PUM3	83	61.466	Ficedula_albicollis
ENSGACG00000017878	pum3	96	60.762	ENSFDAG00000021027	PUM3	82	60.640	Fukomys_damarensis
ENSGACG00000017878	pum3	92	77.839	ENSFHEG00000015576	pum3	82	77.839	Fundulus_heteroclitus
ENSGACG00000017878	pum3	97	70.510	ENSGMOG00000014217	pum3	99	70.510	Gadus_morhua
ENSGACG00000017878	pum3	94	62.524	ENSGALG00000010178	PUM3	83	61.582	Gallus_gallus
ENSGACG00000017878	pum3	66	74.656	ENSGAFG00000001930	pum3	62	74.656	Gambusia_affinis
ENSGACG00000017878	pum3	97	60.755	ENSGAGG00000018983	PUM3	86	60.714	Gopherus_agassizii
ENSGACG00000017878	pum3	96	60.721	ENSGGOG00000006143	PUM3	82	60.600	Gorilla_gorilla
ENSGACG00000017878	pum3	99	69.945	ENSHBUG00000012903	pum3	84	69.945	Haplochromis_burtoni
ENSGACG00000017878	pum3	96	60.571	ENSHGLG00000015868	-	82	60.452	Heterocephalus_glaber_female
ENSGACG00000017878	pum3	96	60.571	ENSHGLG00100018825	PUM3	82	60.452	Heterocephalus_glaber_male
ENSGACG00000017878	pum3	99	80.479	ENSHCOG00000010306	pum3	81	80.479	Hippocampus_comes
ENSGACG00000017878	pum3	97	69.606	ENSIPUG00000024801	pum3	84	69.606	Ictalurus_punctatus
ENSGACG00000017878	pum3	96	60.952	ENSSTOG00000009586	PUM3	82	60.600	Ictidomys_tridecemlineatus
ENSGACG00000017878	pum3	97	59.134	ENSJJAG00000012563	Pum3	82	59.134	Jaculus_jaculus
ENSGACG00000017878	pum3	99	79.374	ENSKMAG00000010277	pum3	85	79.374	Kryptolebias_marmoratus
ENSGACG00000017878	pum3	99	83.824	ENSLBEG00000012213	pum3	83	83.824	Labrus_bergylta
ENSGACG00000017878	pum3	97	58.790	ENSLACG00000008312	PUM3	83	58.757	Latimeria_chalumnae
ENSGACG00000017878	pum3	97	67.293	ENSLOCG00000012529	pum3	85	67.293	Lepisosteus_oculatus
ENSGACG00000017878	pum3	96	60.456	ENSLAFG00000017341	PUM3	82	60.338	Loxodonta_africana
ENSGACG00000017878	pum3	96	60.721	ENSMFAG00000001430	PUM3	82	60.600	Macaca_fascicularis
ENSGACG00000017878	pum3	96	60.721	ENSMMUG00000002362	PUM3	81	60.600	Macaca_mulatta
ENSGACG00000017878	pum3	96	60.721	ENSMNEG00000035288	PUM3	82	60.600	Macaca_nemestrina
ENSGACG00000017878	pum3	96	60.721	ENSMLEG00000034820	PUM3	82	60.600	Mandrillus_leucophaeus
ENSGACG00000017878	pum3	99	84.346	ENSMAMG00000022861	pum3	83	84.346	Mastacembelus_armatus
ENSGACG00000017878	pum3	99	79.963	ENSMZEG00005014205	pum3	82	79.963	Maylandia_zebra
ENSGACG00000017878	pum3	97	55.827	ENSMGAG00000002255	PUM3	85	56.033	Meleagris_gallopavo
ENSGACG00000017878	pum3	96	59.886	ENSMAUG00000009733	Pum3	82	59.774	Mesocricetus_auratus
ENSGACG00000017878	pum3	96	59.393	ENSMICG00000045916	PUM3	72	59.287	Microcebus_murinus
ENSGACG00000017878	pum3	96	59.886	ENSMOCG00000019519	-	82	59.774	Microtus_ochrogaster
ENSGACG00000017878	pum3	97	57.815	ENSMOCG00000014830	-	84	57.815	Microtus_ochrogaster
ENSGACG00000017878	pum3	99	76.471	ENSMMOG00000012184	pum3	86	76.471	Mola_mola
ENSGACG00000017878	pum3	96	58.824	ENSMODG00000015417	PUM3	74	58.410	Monodelphis_domestica
ENSGACG00000017878	pum3	99	84.743	ENSMALG00000022164	pum3	82	84.743	Monopterus_albus
ENSGACG00000017878	pum3	96	59.013	MGP_CAROLIEiJ_G0022845	Pum3	82	59.023	Mus_caroli
ENSGACG00000017878	pum3	96	58.444	ENSMUSG00000041360	Pum3	82	58.459	Mus_musculus
ENSGACG00000017878	pum3	96	58.444	MGP_PahariEiJ_G0014338	Pum3	82	58.459	Mus_pahari
ENSGACG00000017878	pum3	96	58.254	MGP_SPRETEiJ_G0023763	Pum3	82	58.271	Mus_spretus
ENSGACG00000017878	pum3	97	58.945	ENSMPUG00000005125	PUM3	82	58.945	Mustela_putorius_furo
ENSGACG00000017878	pum3	96	59.506	ENSMLUG00000002309	PUM3	82	59.398	Myotis_lucifugus
ENSGACG00000017878	pum3	95	57.611	ENSNGAG00000019468	Pum3	82	56.955	Nannospalax_galili
ENSGACG00000017878	pum3	99	73.588	ENSNBRG00000021370	pum3	83	73.588	Neolamprologus_brichardi
ENSGACG00000017878	pum3	96	60.911	ENSNLEG00000008712	PUM3	82	60.788	Nomascus_leucogenys
ENSGACG00000017878	pum3	89	44.057	ENSMEUG00000013606	-	97	44.082	Notamacropus_eugenii
ENSGACG00000017878	pum3	63	52.924	ENSOPRG00000004225	-	54	52.394	Ochotona_princeps
ENSGACG00000017878	pum3	97	55.431	ENSODEG00000016477	-	81	55.431	Octodon_degus
ENSGACG00000017878	pum3	96	61.217	ENSODEG00000003625	-	82	61.090	Octodon_degus
ENSGACG00000017878	pum3	99	80.882	ENSONIG00000012733	pum3	84	80.882	Oreochromis_niloticus
ENSGACG00000017878	pum3	96	57.252	ENSOANG00000014995	PUM3	97	57.331	Ornithorhynchus_anatinus
ENSGACG00000017878	pum3	96	59.886	ENSOCUG00000026104	-	82	59.774	Oryctolagus_cuniculus
ENSGACG00000017878	pum3	96	60.456	ENSOCUG00000004189	-	82	60.338	Oryctolagus_cuniculus
ENSGACG00000017878	pum3	99	76.471	ENSORLG00000014935	pum3	84	76.471	Oryzias_latipes
ENSGACG00000017878	pum3	99	76.103	ENSORLG00020002841	pum3	84	76.103	Oryzias_latipes_hni
ENSGACG00000017878	pum3	99	76.287	ENSORLG00015015906	pum3	83	77.568	Oryzias_latipes_hsok
ENSGACG00000017878	pum3	99	75.184	ENSOMEG00000009427	pum3	84	75.184	Oryzias_melastigma
ENSGACG00000017878	pum3	95	61.272	ENSOGAG00000008125	-	82	60.714	Otolemur_garnettii
ENSGACG00000017878	pum3	94	44.595	ENSOGAG00000033481	-	83	44.195	Otolemur_garnettii
ENSGACG00000017878	pum3	97	60.943	ENSOARG00000013337	PUM3	82	60.902	Ovis_aries
ENSGACG00000017878	pum3	96	60.721	ENSPPAG00000041337	PUM3	82	60.600	Pan_paniscus
ENSGACG00000017878	pum3	96	60.571	ENSPPRG00000000809	PUM3	82	60.452	Panthera_pardus
ENSGACG00000017878	pum3	96	60.762	ENSPTIG00000021934	PUM3	82	60.640	Panthera_tigris_altaica
ENSGACG00000017878	pum3	96	60.911	ENSPTRG00000020735	PUM3	82	60.788	Pan_troglodytes
ENSGACG00000017878	pum3	96	60.911	ENSPANG00000025118	PUM3	82	60.788	Papio_anubis
ENSGACG00000017878	pum3	98	67.477	ENSPKIG00000022249	pum3	87	64.673	Paramormyrops_kingsleyae
ENSGACG00000017878	pum3	95	60.886	ENSPSIG00000016272	PUM3	84	60.338	Pelodiscus_sinensis
ENSGACG00000017878	pum3	90	74.545	ENSPMGG00000021261	pum3	99	74.545	Periophthalmus_magnuspinnatus
ENSGACG00000017878	pum3	97	47.467	ENSPEMG00000019340	-	80	47.378	Peromyscus_maniculatus_bairdii
ENSGACG00000017878	pum3	97	60.189	ENSPCIG00000030598	PUM3	71	60.189	Phascolarctos_cinereus
ENSGACG00000017878	pum3	96	75.000	ENSPFOG00000001719	pum3	87	75.000	Poecilia_formosa
ENSGACG00000017878	pum3	96	74.905	ENSPLAG00000020010	pum3	85	74.954	Poecilia_latipinna
ENSGACG00000017878	pum3	96	74.715	ENSPMEG00000017451	pum3	85	74.770	Poecilia_mexicana
ENSGACG00000017878	pum3	68	66.667	ENSPREG00000019478	-	67	63.380	Poecilia_reticulata
ENSGACG00000017878	pum3	96	61.101	ENSPPYG00000019255	PUM3	82	60.976	Pongo_abelii
ENSGACG00000017878	pum3	96	52.852	ENSPCAG00000005797	PUM3	78	52.919	Procavia_capensis
ENSGACG00000017878	pum3	96	59.506	ENSPCOG00000027325	PUM3	82	59.398	Propithecus_coquereli
ENSGACG00000017878	pum3	97	60.377	ENSPVAG00000016135	PUM3	78	60.338	Pteropus_vampyrus
ENSGACG00000017878	pum3	99	80.147	ENSPNYG00000016124	pum3	84	80.147	Pundamilia_nyererei
ENSGACG00000017878	pum3	96	67.748	ENSPNAG00000026524	pum3	85	67.481	Pygocentrus_nattereri
ENSGACG00000017878	pum3	96	59.125	ENSRNOG00000048356	RGD1308750	82	59.023	Rattus_norvegicus
ENSGACG00000017878	pum3	96	59.393	ENSRNOG00000012574	Pum3	82	59.398	Rattus_norvegicus
ENSGACG00000017878	pum3	96	60.531	ENSRBIG00000036924	PUM3	82	60.413	Rhinopithecus_bieti
ENSGACG00000017878	pum3	96	60.721	ENSRROG00000041089	PUM3	82	60.600	Rhinopithecus_roxellana
ENSGACG00000017878	pum3	96	60.721	ENSSBOG00000028066	PUM3	82	60.600	Saimiri_boliviensis_boliviensis
ENSGACG00000017878	pum3	97	59.848	ENSSHAG00000003730	PUM3	82	59.811	Sarcophilus_harrisii
ENSGACG00000017878	pum3	97	69.549	ENSSFOG00015018778	pum3	83	69.549	Scleropages_formosus
ENSGACG00000017878	pum3	99	84.007	ENSSMAG00000013236	pum3	84	84.007	Scophthalmus_maximus
ENSGACG00000017878	pum3	99	86.397	ENSSDUG00000001887	pum3	82	86.397	Seriola_dumerili
ENSGACG00000017878	pum3	99	86.213	ENSSLDG00000015766	pum3	83	86.213	Seriola_lalandi_dorsalis
ENSGACG00000017878	pum3	96	56.762	ENSSARG00000000579	PUM3	86	56.685	Sorex_araneus
ENSGACG00000017878	pum3	97	60.264	ENSSPUG00000001707	PUM3	84	60.264	Sphenodon_punctatus
ENSGACG00000017878	pum3	99	83.824	ENSSPAG00000003976	pum3	85	83.824	Stegastes_partitus
ENSGACG00000017878	pum3	97	60.681	ENSSSCG00000005227	PUM3	82	60.640	Sus_scrofa
ENSGACG00000017878	pum3	96	62.357	ENSTGUG00000005339	PUM3	84	62.218	Taeniopygia_guttata
ENSGACG00000017878	pum3	99	82.904	ENSTRUG00000004074	pum3	82	82.904	Takifugu_rubripes
ENSGACG00000017878	pum3	98	82.991	ENSTNIG00000010325	pum3	86	82.991	Tetraodon_nigroviridis
ENSGACG00000017878	pum3	95	45.385	ENSTBEG00000013058	PUM3	82	45.216	Tupaia_belangeri
ENSGACG00000017878	pum3	97	54.442	ENSTTRG00000001062	PUM3	79	54.323	Tursiops_truncatus
ENSGACG00000017878	pum3	97	56.226	ENSUMAG00000018443	PUM3	99	56.226	Ursus_maritimus
ENSGACG00000017878	pum3	97	60.302	ENSVPAG00000010766	PUM3	81	60.264	Vicugna_pacos
ENSGACG00000017878	pum3	96	60.571	ENSVVUG00000006527	PUM3	82	60.452	Vulpes_vulpes
ENSGACG00000017878	pum3	97	49.905	ENSXETG00000011707	pum3	83	49.907	Xenopus_tropicalis
ENSGACG00000017878	pum3	99	72.376	ENSXCOG00000006725	pum3	90	72.376	Xiphophorus_couchianus
ENSGACG00000017878	pum3	99	74.770	ENSXMAG00000002926	pum3	85	74.770	Xiphophorus_maculatus