EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000018134 (Gene tree)
Gene ID: -
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcription repressor
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2291 bases
Position: chrgroupXIV:11375983-11378273
Accession: ZDB-GENE-091118-129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000023962	zf-C2H2	PF00096.26	5.1e-25	1	5
ENSGACP00000023962	zf-C2H2	PF00096.26	5.1e-25	2	5
ENSGACP00000023962	zf-C2H2	PF00096.26	5.1e-25	3	5
ENSGACP00000023962	zf-C2H2	PF00096.26	5.1e-25	4	5
ENSGACP00000023962	zf-C2H2	PF00096.26	5.1e-25	5	5
ENSGACP00000023962	zf-met	PF12874.7	1e-07	1	2
ENSGACP00000023962	zf-met	PF12874.7	1e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000024009	-	1041	-	ENSGACP00000023962	346 (aa)	-	G3Q263

Gene Model

Click here to download ENSGACG00000018134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000018134	gfi1b	58	43.137	ENSGACG00000014395	-	100	43.137
ENSGACG00000018134	gfi1b	66	43.478	ENSGACG00000001523	-	96	43.478
ENSGACG00000018134	gfi1b	53	33.577	ENSGACG00000008733	znf646	73	37.805
ENSGACG00000018134	gfi1b	63	42.690	ENSGACG00000010384	-	100	42.690
ENSGACG00000018134	gfi1b	57	48.171	ENSGACG00000013652	-	100	48.171
ENSGACG00000018134	gfi1b	58	44.628	ENSGACG00000013659	-	96	44.628
ENSGACG00000018134	gfi1b	77	42.138	ENSGACG00000018816	-	99	42.138
ENSGACG00000018134	gfi1b	53	40.816	ENSGACG00000012517	-	99	42.177
ENSGACG00000018134	gfi1b	64	38.194	ENSGACG00000019550	-	95	38.849
ENSGACG00000018134	gfi1b	52	43.066	ENSGACG00000003258	znf319b	88	43.066
ENSGACG00000018134	gfi1b	53	43.210	ENSGACG00000010352	si:ch211-207i20.2	64	43.210
ENSGACG00000018134	gfi1b	89	39.024	ENSGACG00000013351	si:ch211-236k19.4	63	39.024
ENSGACG00000018134	gfi1b	57	39.752	ENSGACG00000012415	GZF1	99	39.752
ENSGACG00000018134	gfi1b	50	43.478	ENSGACG00000001371	-	99	43.478
ENSGACG00000018134	gfi1b	51	37.500	ENSGACG00000001377	-	93	37.500
ENSGACG00000018134	gfi1b	52	42.945	ENSGACG00000010515	ZNF628	99	42.945
ENSGACG00000018134	gfi1b	53	39.394	ENSGACG00000015729	-	98	39.394
ENSGACG00000018134	gfi1b	62	39.706	ENSGACG00000003372	zbtb47b	56	39.706
ENSGACG00000018134	gfi1b	100	51.680	ENSGACG00000004257	gfi1ab	97	52.196
ENSGACG00000018134	gfi1b	51	39.655	ENSGACG00000014840	maza	71	39.655
ENSGACG00000018134	gfi1b	52	44.681	ENSGACG00000005553	znf236	94	37.870
ENSGACG00000018134	gfi1b	53	40.789	ENSGACG00000005742	-	55	40.789
ENSGACG00000018134	gfi1b	64	46.541	ENSGACG00000001358	-	100	46.541
ENSGACG00000018134	gfi1b	71	46.154	ENSGACG00000004549	-	99	46.154
ENSGACG00000018134	gfi1b	52	45.562	ENSGACG00000004478	-	100	45.562
ENSGACG00000018134	gfi1b	56	39.286	ENSGACG00000009449	znf526	66	39.286
ENSGACG00000018134	gfi1b	54	36.036	ENSGACG00000010147	snai1a	51	35.965
ENSGACG00000018134	gfi1b	59	45.882	ENSGACG00000010393	-	99	45.882
ENSGACG00000018134	gfi1b	56	45.652	ENSGACG00000004761	-	100	45.652
ENSGACG00000018134	gfi1b	59	45.562	ENSGACG00000004765	-	100	45.562
ENSGACG00000018134	gfi1b	100	53.631	ENSGACG00000015674	gfi1aa	100	53.631
ENSGACG00000018134	gfi1b	56	45.139	ENSGACG00000005239	-	92	43.713
ENSGACG00000018134	gfi1b	51	39.091	ENSGACG00000014714	si:dkey-89b17.4	57	36.508
ENSGACG00000018134	gfi1b	72	41.270	ENSGACG00000010051	-	81	41.270
ENSGACG00000018134	gfi1b	57	47.826	ENSGACG00000013660	-	99	47.826
ENSGACG00000018134	gfi1b	50	42.763	ENSGACG00000019863	-	99	42.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018134	gfi1b	100	76.657	ENSAPOG00000001296	gfi1b	100	76.657	Acanthochromis_polyacanthus
ENSGACG00000018134	gfi1b	99	66.762	ENSACIG00000002190	gfi1b	99	66.762	Amphilophus_citrinellus
ENSGACG00000018134	gfi1b	100	76.657	ENSAOCG00000021187	gfi1b	100	76.657	Amphiprion_ocellaris
ENSGACG00000018134	gfi1b	100	77.233	ENSAPEG00000016196	gfi1b	100	77.233	Amphiprion_percula
ENSGACG00000018134	gfi1b	100	76.554	ENSATEG00000002534	gfi1b	100	76.554	Anabas_testudineus
ENSGACG00000018134	gfi1b	100	55.182	ENSAPLG00000003373	GFI1B	100	55.182	Anas_platyrhynchos
ENSGACG00000018134	gfi1b	100	70.255	ENSACLG00000027053	gfi1b	100	70.255	Astatotilapia_calliptera
ENSGACG00000018134	gfi1b	100	64.820	ENSAMXG00000037544	GFI1B	100	64.820	Astyanax_mexicanus
ENSGACG00000018134	gfi1b	100	54.674	ENSCAPG00000010404	GFI1B	100	54.674	Cavia_aperea
ENSGACG00000018134	gfi1b	100	57.865	ENSCPBG00000021186	GFI1B	100	57.865	Chrysemys_picta_bellii
ENSGACG00000018134	gfi1b	100	70.571	ENSCSEG00000001315	gfi1b	100	70.571	Cynoglossus_semilaevis
ENSGACG00000018134	gfi1b	100	70.977	ENSCVAG00000017168	gfi1b	100	70.977	Cyprinodon_variegatus
ENSGACG00000018134	gfi1b	100	63.836	ENSDARG00000079947	gfi1b	99	82.353	Danio_rerio
ENSGACG00000018134	gfi1b	61	87.931	ENSEEUG00000012609	-	71	87.931	Erinaceus_europaeus
ENSGACG00000018134	gfi1b	100	69.890	ENSELUG00000016933	gfi1b	100	69.890	Esox_lucius
ENSGACG00000018134	gfi1b	100	52.208	ENSFALG00000001479	GFI1B	100	52.208	Ficedula_albicollis
ENSGACG00000018134	gfi1b	100	74.788	ENSFHEG00000015138	gfi1b	100	74.788	Fundulus_heteroclitus
ENSGACG00000018134	gfi1b	100	83.682	ENSGMOG00000019123	gfi1b	90	83.682	Gadus_morhua
ENSGACG00000018134	gfi1b	100	58.120	ENSGALG00000003478	GFI1B	100	58.120	Gallus_gallus
ENSGACG00000018134	gfi1b	67	89.787	ENSGAFG00000003059	gfi1b	100	89.787	Gambusia_affinis
ENSGACG00000018134	gfi1b	100	58.475	ENSGAGG00000021327	GFI1B	100	58.475	Gopherus_agassizii
ENSGACG00000018134	gfi1b	100	70.255	ENSHBUG00000005451	gfi1b	100	70.255	Haplochromis_burtoni
ENSGACG00000018134	gfi1b	100	68.182	ENSHCOG00000013713	gfi1b	100	68.182	Hippocampus_comes
ENSGACG00000018134	gfi1b	100	67.606	ENSIPUG00000012769	gfi1b	100	67.606	Ictalurus_punctatus
ENSGACG00000018134	gfi1b	99	51.680	ENSJJAG00000016355	Gfi1b	100	51.680	Jaculus_jaculus
ENSGACG00000018134	gfi1b	100	75.000	ENSKMAG00000016047	gfi1b	100	75.000	Kryptolebias_marmoratus
ENSGACG00000018134	gfi1b	100	75.211	ENSLBEG00000020297	gfi1b	99	75.211	Labrus_bergylta
ENSGACG00000018134	gfi1b	100	56.941	ENSLACG00000012207	GFI1B	100	56.941	Latimeria_chalumnae
ENSGACG00000018134	gfi1b	100	64.543	ENSLOCG00000005750	gfi1b	100	64.543	Lepisosteus_oculatus
ENSGACG00000018134	gfi1b	100	55.028	ENSLAFG00000022367	GFI1B	100	55.028	Loxodonta_africana
ENSGACG00000018134	gfi1b	100	77.054	ENSMAMG00000003040	gfi1b	100	77.054	Mastacembelus_armatus
ENSGACG00000018134	gfi1b	99	70.455	ENSMZEG00005015594	gfi1b	99	70.455	Maylandia_zebra
ENSGACG00000018134	gfi1b	100	57.790	ENSMGAG00000006129	GFI1B	100	57.790	Meleagris_gallopavo
ENSGACG00000018134	gfi1b	100	74.859	ENSMMOG00000011764	gfi1b	100	74.859	Mola_mola
ENSGACG00000018134	gfi1b	100	48.866	ENSMODG00000012600	GFI1B	100	48.866	Monodelphis_domestica
ENSGACG00000018134	gfi1b	100	77.054	ENSMALG00000004034	gfi1b	100	77.054	Monopterus_albus
ENSGACG00000018134	gfi1b	99	56.657	ENSNGAG00000003333	Gfi1b	100	56.657	Nannospalax_galili
ENSGACG00000018134	gfi1b	99	70.822	ENSNBRG00000012391	gfi1b	99	70.822	Neolamprologus_brichardi
ENSGACG00000018134	gfi1b	100	70.904	ENSONIG00000013011	gfi1b	94	92.179	Oreochromis_niloticus
ENSGACG00000018134	gfi1b	100	56.695	ENSOANG00000014723	GFI1B	100	56.695	Ornithorhynchus_anatinus
ENSGACG00000018134	gfi1b	83	66.090	ENSORLG00000014390	GFI1B	93	66.090	Oryzias_latipes
ENSGACG00000018134	gfi1b	100	71.060	ENSORLG00020003719	GFI1B	100	71.060	Oryzias_latipes_hni
ENSGACG00000018134	gfi1b	100	71.347	ENSORLG00015017142	gfi1b	100	71.347	Oryzias_latipes_hsok
ENSGACG00000018134	gfi1b	100	71.060	ENSOMEG00000015149	GFI1B	100	71.060	Oryzias_melastigma
ENSGACG00000018134	gfi1b	100	53.933	ENSOGAG00000008879	GFI1B	100	55.367	Otolemur_garnettii
ENSGACG00000018134	gfi1b	100	64.820	ENSPKIG00000007643	gfi1b	100	64.820	Paramormyrops_kingsleyae
ENSGACG00000018134	gfi1b	100	59.375	ENSPSIG00000012112	GFI1B	100	59.375	Pelodiscus_sinensis
ENSGACG00000018134	gfi1b	99	62.606	ENSPMGG00000006021	gfi1b	99	63.456	Periophthalmus_magnuspinnatus
ENSGACG00000018134	gfi1b	100	48.969	ENSPCIG00000019724	GFI1B	100	48.969	Phascolarctos_cinereus
ENSGACG00000018134	gfi1b	100	72.778	ENSPFOG00000003460	gfi1b	100	72.778	Poecilia_formosa
ENSGACG00000018134	gfi1b	100	74.294	ENSPLAG00000021960	GFI1B	100	74.294	Poecilia_latipinna
ENSGACG00000018134	gfi1b	100	72.802	ENSPLAG00000017181	GFI1B	100	72.802	Poecilia_latipinna
ENSGACG00000018134	gfi1b	100	73.729	ENSPMEG00000001556	GFI1B	100	73.729	Poecilia_mexicana
ENSGACG00000018134	gfi1b	100	73.729	ENSPMEG00000019220	gfi1b	100	73.729	Poecilia_mexicana
ENSGACG00000018134	gfi1b	100	73.446	ENSPREG00000021718	gfi1b	100	73.446	Poecilia_reticulata
ENSGACG00000018134	gfi1b	100	68.908	ENSPNYG00000018422	gfi1b	100	68.908	Pundamilia_nyererei
ENSGACG00000018134	gfi1b	100	64.624	ENSPNAG00000021118	gfi1b	100	64.624	Pygocentrus_nattereri
ENSGACG00000018134	gfi1b	100	46.214	ENSSHAG00000006462	GFI1B	100	46.214	Sarcophilus_harrisii
ENSGACG00000018134	gfi1b	84	57.929	ENSSFOG00015011566	gfi1b	90	57.929	Scleropages_formosus
ENSGACG00000018134	gfi1b	100	74.085	ENSSMAG00000015181	gfi1b	99	73.295	Scophthalmus_maximus
ENSGACG00000018134	gfi1b	100	77.620	ENSSDUG00000011604	gfi1b	100	77.620	Seriola_dumerili
ENSGACG00000018134	gfi1b	100	77.054	ENSSLDG00000013823	gfi1b	100	77.054	Seriola_lalandi_dorsalis
ENSGACG00000018134	gfi1b	100	48.315	ENSSPUG00000016039	GFI1B	100	48.315	Sphenodon_punctatus
ENSGACG00000018134	gfi1b	100	75.645	ENSSPAG00000022914	gfi1b	100	75.645	Stegastes_partitus
ENSGACG00000018134	gfi1b	100	73.371	ENSTRUG00000004525	gfi1b	100	73.371	Takifugu_rubripes
ENSGACG00000018134	gfi1b	100	71.591	ENSTNIG00000003834	gfi1b	100	71.591	Tetraodon_nigroviridis
ENSGACG00000018134	gfi1b	98	89.655	ENSTBEG00000014459	GFI1B	83	89.655	Tupaia_belangeri
ENSGACG00000018134	gfi1b	100	53.867	ENSXETG00000006263	gfi1b	100	54.144	Xenopus_tropicalis
ENSGACG00000018134	gfi1b	100	74.576	ENSXMAG00000027589	gfi1b	100	74.576	Xiphophorus_maculatus