EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000018233 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 11399 bases
Position: chrgroupIX:10713754-10725152
Accession: ZDB-GENE-030131-4076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000024110	Suf	PF05843.14	2e-12	1	2
ENSGACP00000024110	Suf	PF05843.14	2e-12	2	2
ENSGACP00000024108	Suf	PF05843.14	1.2e-09	1	1
ENSGACP00000024108	S1	PF00575.23	9e-64	1	4
ENSGACP00000024108	S1	PF00575.23	9e-64	2	4
ENSGACP00000024108	S1	PF00575.23	9e-64	3	4
ENSGACP00000024108	S1	PF00575.23	9e-64	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000024155	-	5502	-	ENSGACP00000024108	1833 (aa)	-	G3Q2K9
ENSGACT00000024157	-	1219	-	ENSGACP00000024110	393 (aa)	-	G3Q2L1

Gene Model

Click here to download ENSGACG00000018233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000018233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000018233	pdcd11	52	66.512	ENSGACG00000019251	-	100	66.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000018233	pdcd11	96	56.992	ENSG00000148843	PDCD11	99	43.873	Homo_sapiens
ENSGACG00000018233	pdcd11	97	86.877	ENSAPOG00000015629	pdcd11	100	75.177	Acanthochromis_polyacanthus
ENSGACG00000018233	pdcd11	96	60.677	ENSAMEG00000017935	PDCD11	99	43.899	Ailuropoda_melanoleuca
ENSGACG00000018233	pdcd11	50	65.536	ENSACIG00000006458	-	98	65.536	Amphilophus_citrinellus
ENSGACG00000018233	pdcd11	97	87.927	ENSAOCG00000015287	pdcd11	100	75.285	Amphiprion_ocellaris
ENSGACG00000018233	pdcd11	54	74.498	ENSAPEG00000020240	pdcd11	98	74.498	Amphiprion_percula
ENSGACG00000018233	pdcd11	96	87.632	ENSATEG00000021043	pdcd11	99	75.841	Anabas_testudineus
ENSGACG00000018233	pdcd11	97	57.881	ENSAPLG00000010301	PDCD11	99	43.673	Anas_platyrhynchos
ENSGACG00000018233	pdcd11	96	57.632	ENSACAG00000004796	PDCD11	99	43.720	Anolis_carolinensis
ENSGACG00000018233	pdcd11	96	57.895	ENSANAG00000034576	PDCD11	99	43.843	Aotus_nancymaae
ENSGACG00000018233	pdcd11	92	85.714	ENSACLG00000018236	pdcd11	99	80.286	Astatotilapia_calliptera
ENSGACG00000018233	pdcd11	76	76.333	ENSAMXG00000005458	pdcd11	97	50.983	Astyanax_mexicanus
ENSGACG00000018233	pdcd11	96	58.747	ENSBTAG00000009715	PDCD11	99	44.021	Bos_taurus
ENSGACG00000018233	pdcd11	97	57.218	ENSCJAG00000018257	PDCD11	99	43.813	Callithrix_jacchus
ENSGACG00000018233	pdcd11	96	59.791	ENSCAFG00000010411	PDCD11	99	43.714	Canis_familiaris
ENSGACG00000018233	pdcd11	96	59.791	ENSCAFG00020010369	PDCD11	99	43.949	Canis_lupus_dingo
ENSGACG00000018233	pdcd11	95	58.311	ENSCHIG00000025218	PDCD11	99	43.426	Capra_hircus
ENSGACG00000018233	pdcd11	96	58.268	ENSTSYG00000033423	PDCD11	98	43.982	Carlito_syrichta
ENSGACG00000018233	pdcd11	96	58.730	ENSCAPG00000005386	PDCD11	99	39.701	Cavia_aperea
ENSGACG00000018233	pdcd11	95	58.777	ENSCPOG00000010957	PDCD11	99	43.314	Cavia_porcellus
ENSGACG00000018233	pdcd11	96	57.520	ENSCCAG00000018950	PDCD11	99	43.501	Cebus_capucinus
ENSGACG00000018233	pdcd11	96	57.592	ENSCATG00000044331	PDCD11	99	44.015	Cercocebus_atys
ENSGACG00000018233	pdcd11	94	58.667	ENSCLAG00000001029	PDCD11	99	43.647	Chinchilla_lanigera
ENSGACG00000018233	pdcd11	96	57.592	ENSCSAG00000005346	PDCD11	99	44.008	Chlorocebus_sabaeus
ENSGACG00000018233	pdcd11	77	70.543	ENSCHOG00000004796	PDCD11	82	70.543	Choloepus_hoffmanni
ENSGACG00000018233	pdcd11	90	60.745	ENSCPBG00000024487	PDCD11	99	60.920	Chrysemys_picta_bellii
ENSGACG00000018233	pdcd11	66	40.769	ENSCSAVG00000003855	-	90	40.613	Ciona_savignyi
ENSGACG00000018233	pdcd11	96	57.592	ENSCANG00000043300	PDCD11	99	43.799	Colobus_angolensis_palliatus
ENSGACG00000018233	pdcd11	97	59.162	ENSCGRG00001006458	Pdcd11	99	43.229	Cricetulus_griseus_chok1gshd
ENSGACG00000018233	pdcd11	97	58.901	ENSCGRG00000003583	Pdcd11	99	43.153	Cricetulus_griseus_crigri
ENSGACG00000018233	pdcd11	97	70.296	ENSCSEG00000010739	pdcd11	99	70.463	Cynoglossus_semilaevis
ENSGACG00000018233	pdcd11	91	83.240	ENSCVAG00000018903	pdcd11	100	67.305	Cyprinodon_variegatus
ENSGACG00000018233	pdcd11	95	68.351	ENSDARG00000052480	pdcd11	100	52.162	Danio_rerio
ENSGACG00000018233	pdcd11	93	59.946	ENSDNOG00000013838	PDCD11	99	43.671	Dasypus_novemcinctus
ENSGACG00000018233	pdcd11	96	58.421	ENSDORG00000010420	Pdcd11	99	43.753	Dipodomys_ordii
ENSGACG00000018233	pdcd11	90	33.613	FBgn0039182	CG5728	86	33.613	Drosophila_melanogaster
ENSGACG00000018233	pdcd11	83	56.970	ENSETEG00000000813	PDCD11	99	39.698	Echinops_telfairi
ENSGACG00000018233	pdcd11	75	50.680	ENSEBUG00000002358	-	88	50.680	Eptatretus_burgeri
ENSGACG00000018233	pdcd11	96	59.326	ENSEASG00005015159	PDCD11	99	45.581	Equus_asinus_asinus
ENSGACG00000018233	pdcd11	96	58.915	ENSECAG00000020507	PDCD11	99	44.733	Equus_caballus
ENSGACG00000018233	pdcd11	97	57.963	ENSEEUG00000009245	PDCD11	89	47.458	Erinaceus_europaeus
ENSGACG00000018233	pdcd11	97	74.869	ENSELUG00000004211	pdcd11	99	58.649	Esox_lucius
ENSGACG00000018233	pdcd11	96	59.686	ENSFCAG00000002384	PDCD11	99	44.197	Felis_catus
ENSGACG00000018233	pdcd11	97	58.854	ENSFALG00000008775	PDCD11	99	44.079	Ficedula_albicollis
ENSGACG00000018233	pdcd11	96	58.947	ENSFDAG00000009532	PDCD11	99	43.750	Fukomys_damarensis
ENSGACG00000018233	pdcd11	97	82.152	ENSFHEG00000022997	pdcd11	96	86.645	Fundulus_heteroclitus
ENSGACG00000018233	pdcd11	98	71.318	ENSGMOG00000004186	pdcd11	94	59.781	Gadus_morhua
ENSGACG00000018233	pdcd11	75	41.972	ENSGALG00000008265	PDCD11	99	41.632	Gallus_gallus
ENSGACG00000018233	pdcd11	95	79.947	ENSGAFG00000012806	pdcd11	100	67.616	Gambusia_affinis
ENSGACG00000018233	pdcd11	98	57.990	ENSGAGG00000024314	PDCD11	99	46.292	Gopherus_agassizii
ENSGACG00000018233	pdcd11	96	56.992	ENSGGOG00000011621	PDCD11	99	43.660	Gorilla_gorilla
ENSGACG00000018233	pdcd11	97	83.508	ENSHBUG00000020226	pdcd11	99	72.757	Haplochromis_burtoni
ENSGACG00000018233	pdcd11	96	56.728	ENSHGLG00000001462	PDCD11	99	43.870	Heterocephalus_glaber_female
ENSGACG00000018233	pdcd11	96	53.562	ENSHGLG00100018779	PDCD11	99	43.230	Heterocephalus_glaber_male
ENSGACG00000018233	pdcd11	96	81.842	ENSHCOG00000016006	pdcd11	100	67.263	Hippocampus_comes
ENSGACG00000018233	pdcd11	62	51.923	ENSIPUG00000015102	pdcd11	99	53.929	Ictalurus_punctatus
ENSGACG00000018233	pdcd11	96	59.211	ENSSTOG00000014553	PDCD11	99	43.693	Ictidomys_tridecemlineatus
ENSGACG00000018233	pdcd11	95	60.800	ENSJJAG00000015523	Pdcd11	99	44.656	Jaculus_jaculus
ENSGACG00000018233	pdcd11	50	67.356	ENSKMAG00000021182	pdcd11	99	67.356	Kryptolebias_marmoratus
ENSGACG00000018233	pdcd11	96	61.376	ENSLOCG00000011818	pdcd11	99	54.095	Lepisosteus_oculatus
ENSGACG00000018233	pdcd11	96	56.186	ENSLAFG00000008398	PDCD11	99	43.883	Loxodonta_africana
ENSGACG00000018233	pdcd11	96	57.592	ENSMFAG00000044058	PDCD11	99	44.008	Macaca_fascicularis
ENSGACG00000018233	pdcd11	96	57.592	ENSMMUG00000007058	PDCD11	99	43.955	Macaca_mulatta
ENSGACG00000018233	pdcd11	96	57.330	ENSMNEG00000040726	PDCD11	99	43.955	Macaca_nemestrina
ENSGACG00000018233	pdcd11	88	60.694	ENSMLEG00000040978	PDCD11	99	43.817	Mandrillus_leucophaeus
ENSGACG00000018233	pdcd11	97	84.555	ENSMAMG00000009572	pdcd11	100	74.580	Mastacembelus_armatus
ENSGACG00000018233	pdcd11	97	83.770	ENSMZEG00005008949	pdcd11	99	72.703	Maylandia_zebra
ENSGACG00000018233	pdcd11	97	57.732	ENSMGAG00000010482	PDCD11	99	44.727	Meleagris_gallopavo
ENSGACG00000018233	pdcd11	97	58.639	ENSMAUG00000014924	Pdcd11	96	45.652	Mesocricetus_auratus
ENSGACG00000018233	pdcd11	98	56.858	ENSMICG00000012421	PDCD11	99	44.397	Microcebus_murinus
ENSGACG00000018233	pdcd11	96	59.416	ENSMOCG00000021792	Pdcd11	99	43.228	Microtus_ochrogaster
ENSGACG00000018233	pdcd11	96	78.158	ENSMMOG00000007572	pdcd11	97	70.099	Mola_mola
ENSGACG00000018233	pdcd11	96	58.730	ENSMODG00000011077	PDCD11	95	48.217	Monodelphis_domestica
ENSGACG00000018233	pdcd11	89	81.714	ENSMALG00000003859	pdcd11	99	72.035	Monopterus_albus
ENSGACG00000018233	pdcd11	97	59.055	MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.205	Mus_caroli
ENSGACG00000018233	pdcd11	97	58.793	ENSMUSG00000025047	Pdcd11	99	43.092	Mus_musculus
ENSGACG00000018233	pdcd11	97	57.963	MGP_PahariEiJ_G0014540	Pdcd11	99	43.159	Mus_pahari
ENSGACG00000018233	pdcd11	97	58.530	MGP_SPRETEiJ_G0023971	Pdcd11	99	43.370	Mus_spretus
ENSGACG00000018233	pdcd11	96	58.839	ENSMPUG00000016829	PDCD11	99	44.557	Mustela_putorius_furo
ENSGACG00000018233	pdcd11	97	57.662	ENSMLUG00000004997	PDCD11	99	43.737	Myotis_lucifugus
ENSGACG00000018233	pdcd11	96	59.008	ENSNGAG00000018143	Pdcd11	99	44.133	Nannospalax_galili
ENSGACG00000018233	pdcd11	84	81.646	ENSNBRG00000021596	pdcd11	97	75.989	Neolamprologus_brichardi
ENSGACG00000018233	pdcd11	96	57.853	ENSNLEG00000026700	PDCD11	99	42.910	Nomascus_leucogenys
ENSGACG00000018233	pdcd11	77	65.333	ENSMEUG00000013719	-	70	65.333	Notamacropus_eugenii
ENSGACG00000018233	pdcd11	96	58.901	ENSOPRG00000010593	PDCD11	96	44.766	Ochotona_princeps
ENSGACG00000018233	pdcd11	95	58.333	ENSODEG00000008079	PDCD11	99	43.701	Octodon_degus
ENSGACG00000018233	pdcd11	97	83.508	ENSONIG00000018835	pdcd11	99	72.920	Oreochromis_niloticus
ENSGACG00000018233	pdcd11	99	56.599	ENSOANG00000001636	-	99	42.850	Ornithorhynchus_anatinus
ENSGACG00000018233	pdcd11	97	58.182	ENSOCUG00000006312	PDCD11	99	44.209	Oryctolagus_cuniculus
ENSGACG00000018233	pdcd11	97	80.789	ENSORLG00020003642	pdcd11	100	68.658	Oryzias_latipes_hni
ENSGACG00000018233	pdcd11	97	81.053	ENSORLG00015001618	pdcd11	100	68.604	Oryzias_latipes_hsok
ENSGACG00000018233	pdcd11	97	81.316	ENSOMEG00000010904	pdcd11	98	68.242	Oryzias_melastigma
ENSGACG00000018233	pdcd11	97	58.594	ENSOGAG00000008683	PDCD11	99	44.562	Otolemur_garnettii
ENSGACG00000018233	pdcd11	96	57.441	ENSOARG00000003719	PDCD11	99	43.291	Ovis_aries
ENSGACG00000018233	pdcd11	96	56.992	ENSPPAG00000024593	PDCD11	99	43.176	Pan_paniscus
ENSGACG00000018233	pdcd11	98	59.021	ENSPPRG00000015133	PDCD11	99	44.403	Panthera_pardus
ENSGACG00000018233	pdcd11	96	59.424	ENSPTIG00000011433	PDCD11	99	44.444	Panthera_tigris_altaica
ENSGACG00000018233	pdcd11	96	56.992	ENSPTRG00000002911	PDCD11	99	44.019	Pan_troglodytes
ENSGACG00000018233	pdcd11	96	57.218	ENSPANG00000020959	PDCD11	99	44.025	Papio_anubis
ENSGACG00000018233	pdcd11	95	66.043	ENSPKIG00000000973	pdcd11	99	53.059	Paramormyrops_kingsleyae
ENSGACG00000018233	pdcd11	77	43.133	ENSPSIG00000005102	PDCD11	95	43.133	Pelodiscus_sinensis
ENSGACG00000018233	pdcd11	80	82.595	ENSPMGG00000007289	pdcd11	93	80.923	Periophthalmus_magnuspinnatus
ENSGACG00000018233	pdcd11	96	57.784	ENSPEMG00000010315	Pdcd11	99	42.940	Peromyscus_maniculatus_bairdii
ENSGACG00000018233	pdcd11	94	54.642	ENSPMAG00000003098	pdcd11	99	39.432	Petromyzon_marinus
ENSGACG00000018233	pdcd11	97	57.368	ENSPCIG00000001118	PDCD11	100	43.872	Phascolarctos_cinereus
ENSGACG00000018233	pdcd11	97	82.368	ENSPFOG00000006012	pdcd11	100	68.926	Poecilia_formosa
ENSGACG00000018233	pdcd11	97	82.415	ENSPLAG00000014494	pdcd11	100	68.499	Poecilia_latipinna
ENSGACG00000018233	pdcd11	97	81.579	ENSPMEG00000018177	pdcd11	98	66.521	Poecilia_mexicana
ENSGACG00000018233	pdcd11	97	81.842	ENSPREG00000000475	pdcd11	100	68.076	Poecilia_reticulata
ENSGACG00000018233	pdcd11	96	56.992	ENSPPYG00000002621	PDCD11	99	39.206	Pongo_abelii
ENSGACG00000018233	pdcd11	97	57.474	ENSPCAG00000011663	PDCD11	65	50.573	Procavia_capensis
ENSGACG00000018233	pdcd11	92	59.079	ENSPCOG00000023327	PDCD11	97	46.335	Propithecus_coquereli
ENSGACG00000018233	pdcd11	96	58.684	ENSPVAG00000004176	PDCD11	99	43.856	Pteropus_vampyrus
ENSGACG00000018233	pdcd11	97	83.770	ENSPNYG00000003979	pdcd11	99	72.594	Pundamilia_nyererei
ENSGACG00000018233	pdcd11	97	70.000	ENSPNAG00000017225	pdcd11	100	55.037	Pygocentrus_nattereri
ENSGACG00000018233	pdcd11	96	59.843	ENSRNOG00000020304	Pdcd11	99	43.061	Rattus_norvegicus
ENSGACG00000018233	pdcd11	96	57.330	ENSRBIG00000011889	PDCD11	99	43.862	Rhinopithecus_bieti
ENSGACG00000018233	pdcd11	96	57.592	ENSRROG00000030483	PDCD11	99	43.810	Rhinopithecus_roxellana
ENSGACG00000018233	pdcd11	89	31.893	YMR229C	-	98	32.138	Saccharomyces_cerevisiae
ENSGACG00000018233	pdcd11	96	57.784	ENSSBOG00000030308	PDCD11	99	43.629	Saimiri_boliviensis_boliviensis
ENSGACG00000018233	pdcd11	98	56.555	ENSSHAG00000018258	PDCD11	99	42.804	Sarcophilus_harrisii
ENSGACG00000018233	pdcd11	97	68.930	ENSSFOG00015003881	pdcd11	100	54.462	Scleropages_formosus
ENSGACG00000018233	pdcd11	97	85.455	ENSSMAG00000006612	pdcd11	100	74.430	Scophthalmus_maximus
ENSGACG00000018233	pdcd11	95	86.631	ENSSDUG00000021302	pdcd11	99	73.292	Seriola_dumerili
ENSGACG00000018233	pdcd11	76	65.306	ENSSARG00000002540	PDCD11	70	65.306	Sorex_araneus
ENSGACG00000018233	pdcd11	97	73.363	ENSSPAG00000017558	pdcd11	100	73.714	Stegastes_partitus
ENSGACG00000018233	pdcd11	96	59.269	ENSSSCG00000010599	PDCD11	99	44.580	Sus_scrofa
ENSGACG00000018233	pdcd11	97	58.486	ENSTGUG00000010303	-	99	50.084	Taeniopygia_guttata
ENSGACG00000018233	pdcd11	69	67.111	ENSTRUG00000014291	pdcd11	100	67.111	Takifugu_rubripes
ENSGACG00000018233	pdcd11	97	81.890	ENSTNIG00000012085	pdcd11	99	67.970	Tetraodon_nigroviridis
ENSGACG00000018233	pdcd11	89	59.143	ENSTBEG00000001893	PDCD11	99	41.689	Tupaia_belangeri
ENSGACG00000018233	pdcd11	99	41.941	ENSTTRG00000003356	PDCD11	99	42.524	Tursiops_truncatus
ENSGACG00000018233	pdcd11	96	60.105	ENSUAMG00000018015	PDCD11	99	44.127	Ursus_americanus
ENSGACG00000018233	pdcd11	96	60.105	ENSUMAG00000023567	PDCD11	99	43.453	Ursus_maritimus
ENSGACG00000018233	pdcd11	64	48.315	ENSVPAG00000007405	PDCD11	79	48.315	Vicugna_pacos
ENSGACG00000018233	pdcd11	96	59.686	ENSVVUG00000004457	PDCD11	99	43.947	Vulpes_vulpes
ENSGACG00000018233	pdcd11	97	57.073	ENSXETG00000009482	pdcd11	99	44.584	Xenopus_tropicalis
ENSGACG00000018233	pdcd11	100	57.858	ENSXCOG00000012420	pdcd11	100	57.809	Xiphophorus_couchianus
ENSGACG00000018233	pdcd11	97	82.415	ENSXMAG00000004638	pdcd11	100	69.130	Xiphophorus_maculatus